|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9631#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 926 fasta sequence
[CAGAATCCCCCGCCGAAGAACCTTCCCTCGCGT--ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC-TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA-GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGTTAGCCACCAC-GTGTGTTGATTCGTTTTTTTTTACTTTTTATTCATTCATTACTTACTCAATGGTAAGCAATATTGGTAGCAGCAGTTCAGGGAGGGTCGGGAACTGCGTATGTTAGTTTTCAGTTGATCATTCGATGCGCATTTCGT]
[+] EMBL AL934803 [CAGAATCCCCCGAGGTTTTAACTTCCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGG CCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCANCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCA ]
[+] EMBL BM599239 [ CCGAAGAACCTTCCCTCGCGT ACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGTCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAA ]
[+] EMBL BM576756 [ CCGAAGAACCTTCCCTCGCGT ACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGTCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAAGGGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAG ]
[+] EMBL BX607032 [ TTCCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACTATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACAC ]
[+] EMBL BM631403 [ gaCCCACGCGTCCGCCGGGTTCAAATTCAGCGCAGAAAGTGAAACTATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCAACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCAT ]
[+] EMBL BX627144 [ CCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACTATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCAACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA NGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGANGTGCACGAACGCATCCGCAAGAAGCTGACCGCAATGTCAGCGCAGGACGAGG ]
[+] EMBL BX606843 [ CCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACA ]
[+] EMBL BM643695 [ ccgCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTG ]
[+] EMBL BX623554 [ TGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAANGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGTTAGCCACCAC GTGTGTTGATTCGTTTTTTTTTACTTTTTATTCATTCATTACTTACTCAATGGTAAGCAATATTGGTAG ]
[+] EMBL BM618039 [ ccgGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGG AAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAGGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGTTAGCCACCACGGGGGGTTAATTCGTTTTTTTTTtttac ]
[+] EMBL BX627029 [ AACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCA ]
[+] EMBL BX626425 [ TTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGT ]
[+] EMBL BM613283 [ TTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCTCATCGAAAAATTCTGTCGACAAGAATCTCTACAAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGC ]
[+] EMBL BX615706 [ ACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCA ]
[+] EMBL BX616015 [ CGATTATGCGCCTCGGACACTCGGGAAAAATCGGAATCGGCGGGGGCATCATCAGTGTGCTAGGCATCGGAGCGTCCGTCGCATCGAAAAATGCGGCCGACAAGAATCGCTACGAGAATATGAAAATCCGCGAACGAAGGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTCCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTGGAAAGAGGCAGCAAACGCAATATCAATCGACAATCCCGGATAACTCGTGGTCAGTCGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGAAGCAGGAGATGGAAATCGAAATGATGTCGGAACTGTACAGCCGCATGACACAGGCTGGCCACAAAAAGGGTATCCCACCAAAGTAGGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATCGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGGCAGCGCAGGA ]
[+] EMBL BM628293 [ ccgGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCATACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTACAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGTCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGATCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGGCAGCCATCAT GTGTGTTGATTCG TTTTTTTTACTTTTTATTCATTCATTACTTACTCAATGGTAAGCAATATTGGTAGCAGCAGTTCAGGGAGGGTCGGGAACTGCGTATGTTAGTTTTCAGTTGATCATTCGATGCGCATTTCGT]
consensusID : consensus_9631#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence
[CCCCGAGGTCACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCACACCATGAGCATGCCCCAGCTGGACGCGGCCAGCAGGCCAAACTGAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGGCGACTCGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGT]
[+] EMBL AL931854 [CCCCGAGGTCACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCACACCATGAGCATGCCCCAGCTGGACGCGGCCAGCAGGCCAAACTGAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGGCGACTCGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGT]
[+] EMBL BX618919 [ GTGTGCTAGGCATAGGAGCGTTCGTCGCAACGAAAAATACGGTCGACAAGAATCGCGACGAGAATATGAAAATTCGCGAACGAAGGCGCCAATCGAACGGGGGTCAATACGAAGTCAAGGAAGCGCGACGGTACGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATAT ]
consensusID : consensus_9631#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence
[CCGGCTCCACCGCCGTACAGTGTTTCGTAAGAACCTTCCCTCGCGTACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCA]
[+] EMBL BM580788 [CCGGCTCCACCGCCGTACAGTGTTTCGTAAGAACCTTCCCTCGCGTACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9631#0 -------------CAGAATCCCCCGCCGAAGAACCTTCCCTCGCGTACCGGGTTCAAATT 47
consensus_9631#1 ------------------------------------------------------------
consensus_9631#2 CCGGCTCCACCGCCGTACAGTGTTTCGTAAGAACCTTCCCTCGCGTACCGGGTTCAAATT 60
consensus_9631#0 CAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTT 107
consensus_9631#1 --------------CCCCGAGGTCA-CACGTTTGTTGATGTAGCGAACATTTCCTTTTTT 45
consensus_9631#2 CAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCCTTTTTT 120
* * ** ****************** ***************
consensus_9631#0 TCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCAT 167
consensus_9631#1 TCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCAT 105
consensus_9631#2 TCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCAT 180
************************************************************
consensus_9631#0 CATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCG 227
consensus_9631#1 CATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCG 165
consensus_9631#2 CATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCG 240
************************************************************
consensus_9631#0 CTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGT 287
consensus_9631#1 CTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGT 225
consensus_9631#2 CTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGT 300
************************************************************
consensus_9631#0 CAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCC 347
consensus_9631#1 CAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCC 285
consensus_9631#2 CAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCA------------------------ 336
********************************* **
consensus_9631#0 CGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGT 407
consensus_9631#1 CGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGT 345
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 TGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACG 467
consensus_9631#1 TGTGAAAGCAAGAAGCAAACTCCTCAACCGGC-ACACCATGAGCATGCCCCAGCTGGACG 404
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 CGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATC 527
consensus_9631#1 CGGCC-AGCAGGCCAAACTG-AGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATC 462
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 TGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACT 587
consensus_9631#1 TGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGGCGACT 522
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 CGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGG 647
consensus_9631#1 CGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGT------------------- 563
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 TGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAA 707
consensus_9631#1 ------------------------------------------------------------
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 AGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCC 767
consensus_9631#1 ------------------------------------------------------------
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 GTACCCGCATGTTAGCCACCACGTGTGTTGATTCGTTTTTTTTTACTTTTTATTCATTCA 827
consensus_9631#1 ------------------------------------------------------------
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 TTACTTACTCAATGGTAAGCAATATTGGTAGCAGCAGTTCAGGGAGGGTCGGGAACTGCG 887
consensus_9631#1 ------------------------------------------------------------
consensus_9631#2 ------------------------------------------------------------
consensus_9631#0 TATGTTAGTTTTCAGTTGATCATTCGATGCGCATTTCGT 926
consensus_9631#1 ---------------------------------------
consensus_9631#2 ---------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||