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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 979 fasta sequence
[TCCCAGTTAAACGGTGCGCCGCGCGTTCATCCCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG-TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC-GTT-CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG-CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA-CCGGTT-CGATGGGGCAGGCACTGGCAAAA-GGGAACCG-TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA-GGGGAGAAGAAAGTTGTT-AAGTTGGGTTTTACTTGTTATT-GTT-GTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTAAACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGTGGATCAAGCGACGAACAACTCTTTCATGTCGAACCGACACAATGAATTTCCCGTTTATTTGCACGAGACAGAAAGAGAGAGAGATGAAAGATAGTTCGTTGCTGTATGTAAATTAGAACGAACGTAGTGTAATAGAGCGTAAGGTATATGTAGCTACATGGGGTAGAATTATACTTCGCAAAAAAAGGTTTAATAAACTTGAGTTGTACTG]
[+] EMBL AL932802 [TCCCAGTTAAACGGTGCGCCGCGCGTTCATCGCACGCAAGTGGCACACTTTGCGGGCTGC ATCGATCGAACTAAGTGCACG TTGGAGGAGTG TTCGTTTG TTGAGTTGTAATTTTAAG TTGGGTTTGTGT TTG TTGGAGC TTTATTTGCTGTTGNCCAAACACAATGTTCGCTTCCGGTTCCGAACCCACGCGT CTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGA GAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCGTTTTTTGGGCAAGCAGCACGAAAAGGTACTGACC ACTGGAAGAACGAC ACGGGGC GCGTCCTCAAAA ]
[+] EMBL BM654801 [ CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCCGGTTCCGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTC ]
[+] EMBL BM630215 [ CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAAGAGTGTTTCGTTTGTTTGAGGTGTAATTGGGGGCTGGGTTTTTTCTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCA GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAAGGGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTG ]
[+] EMBL BM637935 [ CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGGGGAAGAAAGTTGTTAAAGTTGGGTTTTATTGGTTATTGGTTGGTGGTTCCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCA ]
[+] EMBL BM648689 [ CCG GCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA GGGGAGAAAAAAGTTGTT AAGTTGGGTTTTACTTGGTATT GTT GTTGGTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGC ]
[+] EMBL BM579108 [ ccgAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAAGAGTGTTTCGTTTGTTTGAGGTGTAATTTTAAGCTGGGTTTTTTCTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCA GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA GGGGAGAAGAAAGTTGTT AAGTTGGGTTTTACTTGTTATT GTT GTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATT ]
[+] EMBL BM633108 [ ccgGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAG ]
[+] EMBL BM623543 [ ccgAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAA ]
[+] EMBL BX613299 [ TTTCGTTTGTTTGAGTTGTAACTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA GGGGAGAAGAAAGTTGTT AAGTTGGGTTTTACTTGTTATT GTT GTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTCATAGATTATTGCAAAACAGTAAACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGTGGATCAAGCGACGAACAACTCTTTCATGTCGAACCGACACAATGAATTTCCCGTTTATTTGCACGAGACAGAAAGAGAGAGAGATGAAAGATAGTTCGTTGCTGTATGTAAATTAGAACGAACGTAGTGTAATAGAGCGTAAGGTATATGTAGCTACATGGGGTAGAATTATACTTCGCAAAAAAAGGTTTAATAAACTTGAGTTGTACTG]
consensusID : consensus_9656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 698 fasta sequence
[CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT-TCGT-TTGTT-TGA-GTTGTAATTT-TAA-G-TT-GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGTTAGTGCAAAGAAGCGGCCCAAGTAGTAGCCCTTTGCTGGCACTGCTGTCTCACCCATTGCATAACCAACCACACAATGAATCCTTTCTCCTCGCGACAGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAATTGTTAAGTTGGGG]
[+] EMBL BM651131 [CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT TCGT TTGTT TGA GTTGTAATTT TAA G TT GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGTTAGTGCAAAGAAGCGGCCCAAGTAGTAGCCCTTTGCTGGCACTGCTGTCTCACCCATTGCATAACCAACCACACAATGAATCCTTTCTCCTCGCGACAGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAATTGTTAAGTTGGGG]
[+] EMBL BM577597 [CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT TCGT TTGTT TGA GTTGTAATTT TAA G TT GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCTAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCAGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCG ]
[+] EMBL BM636759 [ ccgACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT TCGT TTGTT TGA GTTGTAATTT TAA G TT GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAG ]
[+] EMBL AL932234 [ cccgaggTTACGGGCTGC ATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTCTCGTNNTGTTNTGACGTTGTAATTTCNAACGCTTCGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTG ]
consensusID : consensus_9656#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 632 fasta sequence
[CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG-TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAATAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAAGCAGTGTGTGT--GTGTGAGGAGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTCGTAATTATTGGTGGTTCTTTTGCCATCAATCATTCCGATCAAGCT]
[+] EMBL BM578793 [CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAATAATCACGTAACGGTTCAGCACGGCACGTCGCACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAAGCAGTGTGTGT GTGTGAGGAGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTCGTAATTATTGGTGGTTCTTTTGCCATCAATCATTCCGATCAAGCT]
[+] EMBL BM576499 [CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAAGAGTGTTTCGTTTGTTTGAGGTGTAATTTTAAGCTGGGTTTTTTCTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGT ]
[+] EMBL BM650114 [CCGCCCACGCGT C CGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGT ]
[-] EMBL CNS08X15 [ TTGGCTGTTGGTTGTCGGATGCGTCCTGTCTATGCCCGCGCAAGATTTTTCCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAATAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAGGCAGTGTGTGTGAGTGTGAGGGGAGAAGAAAGTTGTTAAGTTGGGTTTTACTT GTTATTgt ]
consensusID : consensus_9656#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence
[CCGCGGACGCGTGGGGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAAGTTGTTAAGTTGGGTTTTACTTGGTAATGGTAGCTGTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCAT]
[+] EMBL BM584474 [CCGCGGACGCGTGGGGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAAGTTGTTAAGTTGGGTTTTACTTGGTAATGGTAGCTGTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCAT]
consensusID : consensus_9656#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence
[CGACCCACGCGTCCGGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTGTTATTGTTGTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCATGTCGAACCGACACAATGAATTTGCCGTTTATTTGCATGAGACAGAGAGGGAGAGATGAAACATAGTTTGTAGCTTTATGTAAATTAGAACGGTCGCAGTGTAATAGAGCGTAAGGTTCATGTAGCTACATGGGGTAGAATTATACTGCGCAGAAAAG]
[+] EMBL BM627475 [CGACCCACGCGTCCGGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTGTTATTGTTGTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCATGTCGAACCGACACAATGAATTTGCCGTTTATTTGCATGAGACAGAGAGGGAGAGATGAAACATAGTTTGTAGCTTTATGTAAATTAGAACGGTCGCAGTGTAATAGAGCGTAAGGTTCATGTAGCTACATGGGGTAGAATTATACTGCGCAGAAAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9656#0 TCCCAGTTAAACGGTGCGCCGCGCGTTCATCCCGCGCAAGTGCCACACTTTGCGGGCTGC 60
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 ------------------------------------------------------------
consensus_9656#1 ------------------------------------------------------------
consensus_9656#2 ------------------------------------------------------------
consensus_9656#0 AATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTA 120
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 ------------------------------------------------------------
consensus_9656#1 ------------------------------------------------------------
consensus_9656#2 ------------------------------------------------------------
consensus_9656#0 AGTTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCT 180
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 ----------------------------------------------------------CC 2
consensus_9656#1 ------------------------------------------------------------
consensus_9656#2 ------------------------------------------------------------
consensus_9656#0 TCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTC 240
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 GCGGACGCGTGGGGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTC 62
consensus_9656#1 ----------------------------------------------------------CC 2
consensus_9656#2 ------------------------------------------------------------
consensus_9656#0 GGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGA 300
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 GGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGA 122
consensus_9656#1 GCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGT 62
consensus_9656#2 -----CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGT 55
consensus_9656#0 GTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGC 360
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 GTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGC 182
consensus_9656#1 GTTTCGTTTGTTTGAGTTGTAATTTTAAGTTGGTTTTTTGTGTTGTTTGGAGCTTTTAGT 122
consensus_9656#2 GTTTCGTTTGTTTGAGTTGTAATTTTAAGTTGGTTTTTTGTGTTGTTTGGAGCTTTTAGT 115
consensus_9656#0 AAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACG 420
consensus_9656#4 ------------------------------------------------------------
consensus_9656#3 AAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACG 242
consensus_9656#1 TGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCA 182
consensus_9656#2 TGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCA 175
consensus_9656#0 GTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAA 480
consensus_9656#4 -----------------------------------------------CGACCCACGCGTC 13
consensus_9656#3 GTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAA 302
consensus_9656#1 GTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGAC 242
consensus_9656#2 GTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGAC 235
* * *
consensus_9656#0 CCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGG-- 538
consensus_9656#4 CGGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAG-- 71
consensus_9656#3 CCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAG-- 360
consensus_9656#1 ACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACG-CTGGCAGTGTGCATGAGGAGGT 301
consensus_9656#2 ACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACG-CTGGCAGTGTGCATGAGGAGGT 294
** *** * ** ** ** * * * **** ** * ** *
consensus_9656#0 CGGCGT--CATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGA 596
consensus_9656#4 CGGCGT--CATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGA 129
consensus_9656#3 CGGCGT--CATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGA 418
consensus_9656#1 CGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAA 361
consensus_9656#2 CGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAA 354
** *** ** * * ** * * ****** ** * * * ** * *
consensus_9656#0 GTGTGAGGGGAGAAGAAAGTTGTTAAGTTG----GGTTTTA-CTTGTTATTGTTGTTGTT 651
consensus_9656#4 GTGTGAGGGGAGAAGAAAGTTGTTAAGTTG----GGTTTTA-CTTGTTATTGTTGTTGTT 184
consensus_9656#3 GTGTGAGGGGAGAAAAAAGTTGTTAAGTTG----GGTTTTA-CTTGGTAATGGTAGCTGT 473
consensus_9656#1 GCGTGAAATACGGTTAGTGCAAAGAAGCGGCCCAAGTAGTAGCCCTTTGCTGGCACTGCT 421
consensus_9656#2 GCGTGAAATACGG----------------------------------------------- 367
* **** *
consensus_9656#0 TCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTAT 711
consensus_9656#4 TCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTAT 244
consensus_9656#3 TCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTAT 533
consensus_9656#1 GTCTCACCCATTGCATAACCAACCACACAATGAATCCTTTCTCCTCGCGACAGGAACAAT 481
consensus_9656#2 ------------------------------------------------------AATAAT 373
* **
consensus_9656#0 TGCAAAACAGTAAACCTTTGACTAGTTTCCCAGGTTTTT-GTGAGGTCCGTTACCAGTGG 770
consensus_9656#4 TGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTT-GTGAGGTCCGTTACCAGAGG 303
consensus_9656#3 TGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTTGTGAGGTCCGTTACCAGAGG 593
consensus_9656#1 CACGTAACGGTTCAGCAC-GGCACGTCACACACGAACC------GGTTCGATGGGGCAGG 534
consensus_9656#2 CACGTAACGGTTCAGCAC-GGCACGTCACACACGAACC------GGTTCGATGGGGCAGG 426
* *** ** * * * * ** * ** * *** ** * **
consensus_9656#0 ATCAAGCGACGAACAACTCTTTCATGTCGAACCGACACAATGAATTTCCCGTTTATTTGC 830
consensus_9656#4 ATCAAGCGACAAACAACTCTTTCATGTCGAACCGACACAATGAATTTGCCGTTTATTTGC 363
consensus_9656#3 ATCAAGCGACAAACAACTCTTTCAT----------------------------------- 618
consensus_9656#1 CACTGGCAAAAGGGAACCGTTTT-TGGGCAAGCAGCACGA-AAAGGTACTGACCAACTGG 592
consensus_9656#2 CACTGGCAAAAGGGAACCGTTTT-TGGGCAAGCAGCACGA-AAAGGTACTGACCAACTGG 484
* ** * *** *** *
consensus_9656#0 ACGA--GACAGAAAGAGAGAGAGATGAAAGATAGTTCGTTGCTGTATGTAAATTAGAACG 888
consensus_9656#4 ATGA--GACAGA--GAGGGAGAGATGAAACATAGTTTGTAGCTTTATGTAAATTAGAACG 419
consensus_9656#3 ------------------------------------------------------------
consensus_9656#1 AAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGT 652
consensus_9656#2 AAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAAGCAGTGTGT 544
consensus_9656#0 AACGTAGTGTAATAGAGCGTAAGGTATATGTAGCTACATGGGGTAGAATTATACTTCGCA 948
consensus_9656#4 GTCGCAGTGTAATAGAGCGTAAGGTTCATGTAGCTACATGGGGTAGAATTATACTGCGCA 479
consensus_9656#3 ------------------------------------------------------------
consensus_9656#1 GTT--CGTGTGTGTGAGTGTGAGGGGAGAAAAAA-TTGTTAAGTTGGGG----------- 698
consensus_9656#2 GT--------------GTGTGAGGAGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTCGTA 590
consensus_9656#0 AAAAAAGGTTTAATAAACTTGAGTTGTACTG----------- 979
consensus_9656#4 GAAAAG------------------------------------ 485
consensus_9656#3 ------------------------------------------
consensus_9656#1 ------------------------------------------
consensus_9656#2 ATTATTGGTGGTTCTTTTGCCATCAATCATTCCGATCAAGCT 632
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||