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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9676#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1027 fasta sequence
[CGCGGTTAAAAAGGTGAAACATGCCTGAAACTTGTGACCGGTATCTTTATATAACTGATTACGTACAAAGCATAANGATTCGCACGTGTGTGTAGAGGAACGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGTGCCGCTGCACCAGACGGCACACTCCGCAAGGTGGAAGATCTGCAAGGCAATGCTGGCTTCGACTGCCAGCAAAGACGANGGGCACGGTCGGCGAACGTTCCATACGACATTGATTCCATGATCGACAAGAACAACGAGACATATTATCCCGATGCCAACAGACCTGACCTCCCTGATCAACTGGGNGTACCGNTCACACGAGCATACCNGATCTTGCCACCATCCGCCGNTGTCACCGAACAAATACCATACATNNTTCGATCACCCGAGAATTTGCCCCCAAAGGGGGGATTGGTAGCCCCACGCACGGCATCTCTAAATACCCGGGCCTAACGGCTGGCAGGGGGCACTNACCGACACGGGCGNCNTNCTCCAACAGGAACACACCCACCGCACCGCACCACAANAGCGGACAACACGNACACCACATANCNGGCCGGCCCCGCCACANCGACGGAAAACCCGGCCAANAATCCAAGCAACTCCAAGCCAACCCAGNAAGGCNGACCACGAAAACCGACGACNACCGGACATCGAGGCCCANAAACAANAACAGAANCCAGGGGNACACCAGAGCCAGCANACACCGGCAACCCCGNGAAAGGGGAGCACCGCGNNGACCACCAGGNCNGACAGGAAACACGGTNCCCGCNCACCAACACGAAAGCGCGGGCAGCGACAGCAGCAAGCAACANGGGGCCTCGGNACAGCCCTGGCCAAACACAACATTCCGGGNAACGCACCCCACCACCCCCGCAACCCCACCACAAACCCACCCCGGAACGNAAAACCCCAGCGGCGAAACANACCCCCACCCCCCCGCGNNCTACCCCACGCACAACAC]
[+] EMBL AL695460 [CGCGGTTAAAAAGGTGAAACATGCCTGAAACTTGTGACCGGTATCTTTATATAACTGATTACGTACAAAGCATAANGATTCGCACGTGTGTGTAGAGGAACGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGTGCCGCTGCACCAGACGGCACACTCCGCAAGGTGGAAGATCTGCAAGGCAATGCTGGCTTCGACTGCCAGCAAAGACGANGGGCACGGTCGGCGAACGTTCCATACGACATTGATTCCATGATCGACAAGAACAACGAGACATATTATCCCGATGCCAACAGACCTGACCTCCCTGATCAACTGGGNGTACCGNTCACACGAGCATACCNGATCTTGCCACCATCCGCCGNTGTCACCGAACAAATACCATACATNNTTCGATCACCCGAGAATTTGCCCCCAAAGGGGGGATTGGTAGCCCCACGCACGGCATCTCTAAATACCCGGGCCTAACGGCTGGCAGGGGGCACTNACCGACACGGGCGNCNTNCTCCAACAGGAACACACCCACCGCACCGCACCACAANAGCGGACAACACGNACACCACATANCNGGCCGGCCCCGCCACANCGACGGAAAACCCGGCCAANAATCCAAGCAACTCCAAGCCAACCCAGNAAGGCNGACCACGAAAACCGACGACNACCGGACATCGAGGCCCANAAACAANAACAGAANCCAGGGGNACACCAGAGCCAGCANACACCGGCAACCCCGNGAAAGGGGAGCACCGCGNNGACCACCAGGNCNGACAGGAAACACGGTNCCCGCNCACCAACACGAAAGCGCGGGCAGCGACAGCAGCAAGCAACANGGGGCCTCGGNACAGCCCTGGCCAAACACAACATTCCGGGNAACGCACCCCACCACCCCCGCAACCCCACCACAAACCCACCCCGGAACGNAAAACCCCAGCGGCGAAACANACCCCCACCCCCCCGCGNNCTACCCCACGCACAACAC]
consensusID : consensus_9676#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 978 fasta sequence
[GGCAGAATCCCCCCGACGTGTTTAAAACCGAAAAAGGTGAAACATGCCGAAATTGTGACCCTGGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGTGAACTGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGTTGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGTCACCAGACTGGGCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTTGCCAGCAAAGACGAGTGGCACGGTCGGCGAACTGTTCCATCTGACCATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACATTGCGGCCGCAGGCGACGCAATCAGATCAGACGAGGGCGATCGAACGTGGCTACAAAACGGTTCGCGTCACGGTCCGAGGGCTCGGCCTGGGACGAATGTCCGCTATAAACGGGGCTCGAGATGGCTGGGCTTGAACATTGTATCCATTACGNGACACGACCCGGTATCGTGGAATCCCCCCCGTCCAGAAAGCAAAGGAAGCTGTAACACATGTGGTGAAATTGTGGCCGTGCTGAGAGGTGGANTTACACTCTGTCATCATACCGTCATGCCATCGCAAATGACGCGCAATTGGAAAACNGCCGNCATNCACCTATCNNTACTTNCCCCAACGTTGGTTNGCCTTTCAAACCGTCGTCTACCAGTACGGACACGGAACGGGCCAATCTATCAACACAAACCTNAACGTCACTNCCAACACTTANANNAAATCACTAAANCAC]
[+] EMBL AL930779 [GGCAGAATCCCCCCGACGTGTTTAAAACCGAAAAAGGTGAAACATGCCGAAATTGTGACCCTGGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGTGAACTGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGTTGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGTCACCAGACTGGGCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTTGCCAGCAAAGACGAGTGGCACGGTCGGCGAACTGTTCCATCTGACCATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACATTGCGGCCGCAGGCGACGCAATCAGATCAGACGAGGGCGATCGAACGTGGCTACAAAACGGTTCGCGTCACGGTCCGAGGGCTCGGCCTGGGACGAATGTCCGCTATAAACGGGGCTCGAGATGGCTGGGCTTGAACATTGTATCCATTACGNGACACGACCCGGTATCGTGGAATCCCCCCCGTCCAGAAAGCAAAGGAAGCTGTAACACATGTGGTGAAATTGTGGCCGTGCTGAGAGGTGGANTTACACTCTGTCATCATACCGTCATGCCATCGCAAATGACGCGCAATTGGAAAACNGCCGNCATNCACCTATCNNTACTTNCCCCAACGTTGGTTNGCCTTTCAAACCGTCGTCTACCAGTACGGACACGGAACGGGCCAATCTATCAACACAAACCTNAACGTCACTNCCAACACTTANANNAAATCACTAAANCAC]
consensusID : consensus_9676#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 935 fasta sequence
[AGCAGATCGGCCGAACGGAAAAAGGTGAAACATGCCGAAATTGT-GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC---ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA-TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT-CGATCACGG-ATGCCAAGGGTGTGCCAC-AGTTTATCCG-CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA-TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC--AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG-CCCGGGACGAATGTCCGCTATAAA-GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAATGTGGCGAAATTGTGGCCCGTGCTGAGGAGGTGGAATTTAACACTCTGTCATCATACCGTCATGCCATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTCCTCTNCCACGTGTGCATCAACGTGTTACAGTTTTGTTTGATTGTTTATTTTAAAAAATAGTAATAAAATTAAAATTCTAGCACCAAAAAATNAACAAAANGACAGCATGTGCG]
[+] EMBL AL696739 [AGCAGATCGGCCGA GGGATNAGGCGAAACATGCCGAAATTGTCGACCCGGTATCGCATGTAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGG CACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCACAAGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG ACC ]
[+] EMBL BM615731 [ CCGAACAGAAAAAGGTGAAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGC ]
[+] EMBL BM593668 [ cCGGAAAAAGGTGAAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCC ]
[+] EMBL BX621991 [ gGGAAAAAGGTGAAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACNAACCAAATGTCCCTCCTGAAGCAGCTCA ]
[+] EMBL BM618636 [ ccgAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACATTTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGGCCCCAGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCC ]
[+] EMBL BX626653 [ ATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACG ]
[+] EMBL AL931555 [ CGAAATTGT GACCCGGTATCGCATGTAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCT ]
[+] EMBL BX623913 [ TCGCATGTAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGTTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCC ]
[+] EMBL BX623476 [ CATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCTTGCTGAAGCAGCTCAATCTATTATCCTGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCT ]
[+] EMBL BX613818 [ CGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTTCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTTCATTACGGACACGACCCCGGTATCGTGGAATCC ]
[+] EMBL BX626462 [ aaAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAATGTGGCGAAATTGTGGCCCGTGCTGA GA GTGGAATTTAACGCTCTGTCATCATACCGTCATG CATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTCCTCTNCCACGTGTGCA ]
[+] EMBL BX608906 [ GAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAATGTGGCGAAATTGTGGCCCGTGCTGAGGAGGCGGAATTTAACACTCTGTCATCATACCGTCATGCCATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTCCT ]
[+] EMBL BX609023 [ CCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTTGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGA ]
[+] EMBL BX628887 [ ATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CNATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAANGGGGCTCGAGATGGCTGGGCTG ]
[-] EMBL BX466803 [ TCATTTNCGATCACGGTATGCCAAGGGTGTGCCAC AGTTTATCCGTCTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTACTNAATACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGGAAGCTGTAAAATGTGGTGAAATTGTGGCCCGTGCTGAGGAGGTGGAATTTAACACTCTGTCATCATACCGTCATGCCATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTTCTCTCCCACGTGTGCATCAACGTGTTACAGTTTTGTTTGATTGTTTATTTTAAAAAATAGTAATAAAATTAAAATTCTAGCACCAAAAAATNAACAAAANGACAGCATGTGCG]
consensusID : consensus_9676#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[CAAGAATTGCCTGAGGTTTGTATTGCATGTTACTGATTACGTACAAAGCATNACATTCGCACGTGTGTGTNGAGGAACGCAGTGAACAAACATGTTCCTCCTGTAAGCAGCTCAATCTATTGTCCGGCCTAAATGCTGCCGGACACTGTGTATGCTGTGTGTAAGACCGCTGCTACCAGACTGTGGCACACTCCGCAAGGTGTGAAGATCTGCAAGTGCTATTGCTTGGCTTCGCTTGCCCAGCAAAGACGAGTGTGCACGTGTCGGCGAAACTGTTTCATCTGACATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACTGAAACTCCCTGNATCAATGGGGTACCTGTTCAACGAGATTACCGATTTGGCACATTCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATTGCCAAGGGTGTTGCCACAGTATTATACCGNTCGTGCGGNATCNAAGNGGCTTCCAAGAACACGCGCAAAGGCACGAACATTGCGGCGCAGTGCGAACGAATCAGATCAGCACGCAGGTGCTGATCGAACGTGGCGTACAAAACNGGTTCTGCGTCACGGTCCCGAGGCCTCGGCGCCGGGGACGAATGTCCGCTATTAACATGGGGNTACGAGA]
[+] EMBL AL930100 [CAAGAATTGCCTGAGGTTTGTATTGCATGTTACTGATTACGTACAAAGCATNACATTCGCACGTGTGTGTNGAGGAACGCAGTGAACAAACATGTTCCTCCTGTAAGCAGCTCAATCTATTGTCCGGCCTAAATGCTGCCGGACACTGTGTATGCTGTGTGTAAGACCGCTGCTACCAGACTGTGGCACACTCCGCAAGGTGTGAAGATCTGCAAGTGCTATTGCTTGGCTTCGCTTGCCCAGCAAAGACGAGTGTGCACGTGTCGGCGAAACTGTTTCATCTGACATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACTGAAACTCCCTGNATCAATGGGGTACCTGTTCAACGAGATTACCGATTTGGCACATTCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATTGCCAAGGGTGTTGCCACAGTATTATACCGNTCGTGCGGNATCNAAGNGGCTTCCAAGAACACGCGCAAAGGCACGAACATTGCGGCGCAGTGCGAACGAATCAGATCAGCACGCAGGTGCTGATCGAACGTGGCGTACAAAACNGGTTCTGCGTCACGGTCCCGAGGCCTCGGCGCCGGGGACGAATGTCCGCTATTAACATGGGGNTACGAGA]
consensusID : consensus_9676#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence
[CAGATCGCGCCNGAGGNNCAAAATGTGACCGGTATCGCATATAACGATTACGTTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGC]
[+] EMBL AL697046 [CAGATCGCGCCNGAGGNNCAAAATGTGACCGGTATCGCATATAACGATTACGTTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9676#1 GGCAGAATCCCCCCGACGTGTTTAAAACCGAAAAAGGTGAAACATGCCGAAATTGTGACC 60
consensus_9676#2 ----------AGCAGATCGGCC--GAACGGAAAAAGGTGAAACATGCCGAAATTGTGACC 48
consensus_9676#3 -------------------------------------CAAGAATTGCCTGAGGTTTG--- 20
consensus_9676#4 ------------------------------CAGATCGCGCCNGAGGNNCAAAATGTGACC 30
consensus_9676#0 -----------------------CGCGGTTAAAAAGGTGAAACATGCCTGAAACTTGTGA 37
* * **
consensus_9676#1 CTGGGTATCGC-ATATAAC-GATTACGT-ACAAAGCATAAC-ATTCGCACGTGTGTGTAG 116
consensus_9676#2 C--GGTATCGC-ATATAAC-GATTACGT-ACAAAGCATAAC-ATTCGCACGTGTGTGTAG 102
consensus_9676#3 -----TATTGC-ATGTTACTGATTACGT-ACAAAGCATNAC-ATTCGCACGTGTGTGTNG 72
consensus_9676#4 ---GGTATCGC-ATATAAC-GATTACGTTACAAAGCATAAC-ATTCGCACGTGTGTGTAG 84
consensus_9676#0 CC-GGTATCTTTATATAACTGATTACGT-ACAAAGCATAANGATTCGCACGTGTGTGTAG 95
*** ** * ** ******** ********* * **************** *
consensus_9676#1 AGTGAACTGCAGTGAACAAACATGTCCTTGCTG-AAGCAGCTCAATCTATTATCCGGCCT 175
consensus_9676#2 AG-GAAC-GCAG-GAACAAACATGTCCCTCCTG-AAGCAGCTCAATCTATTGTCCGGCCT 158
consensus_9676#3 AG-GAAC-GCAGTGAACAAACATGTTCCTCCTGTAAGCAGCTCAATCTATTGTCCGGCCT 130
consensus_9676#4 AG-GAAC-GCAG-GAACAAACATGTCCTTGCTG-AAGCAGCTCAATCTATTATCCGGCCT 140
consensus_9676#0 AG-GAAC-GCAGTGAACAAACATGTCCTTGCTG-AAGCAGCTCAATCTATTATCCGGCCT 152
** **** **** ************ * * *** ***************** ********
consensus_9676#1 AG-TGTTGCCGGACACTG-GTCGGCAGTGT--AAGGCCGCTGTCACCAGACTG-GGCACA 230
consensus_9676#2 AG-TGC-GCCGGACACTG-GTCGGCAGTGT--AAGGCCGCTG-CACCAGAC-G-GCCACA 210
consensus_9676#3 AAATGCTGCCGGACACTGTGTATGCTGTGTGTAAGACCGCTGCTACCAGACTGTGGCACA 190
consensus_9676#4 AG-TGC-GCCGGACACTG-GTCGGCAGTGT--AAGGCCGCTG-CACCAGACGG--CCACA 192
consensus_9676#0 AG-TGC-GCCGGACACTG-GTCGGCAGTGTA-AGTGCCGCTG-CACCAGAC---GGCACA 204
* ** *********** ** ** **** * ****** ******* ****
consensus_9676#1 CTCCGCAAGGTG-GAAGATC-GCAAGG--CAATGCT-GGCTTCGCTTGCC-AGCAAAGAC 284
consensus_9676#2 CTCCGCAAGGTG-GAAGATC-GCAAGG--CAATGCT-GGCTTCGCTGCCC-AGCAAAGAC 264
consensus_9676#3 CTCCGCAAGGTGTGAAGATCTGCAAGTGCTATTGCTTGGCTTCGCTTGCCCAGCAAAGAC 250
consensus_9676#4 CTCCGCAAGGTG-GAAGATC-GCAAGG--CAATGCT-GGCTTCGCTGCCC-AGCAAAGAC 246
consensus_9676#0 CTCCGCAAGGTG-GAAGATCTGCAAGG--CAATGCT-GGCTTCGACTGCC-AGCAAAGAC 259
************ ******* ***** * **** ******* ** *********
consensus_9676#1 GAGTG-GCACG-GTCGGCGAA-CTGTTCCATCTGACCATTTGATTCCATGATCGACAAGA 341
consensus_9676#2 GAG-G-GCACG-GTCGGCGAA-C-GTTCCATC-GACA--TTGATTCCATGATCGACAAGA 316
consensus_9676#3 GAGTGTGCACGTGTCGGCGAAACTGTTTCATCTGACA-TTTGATTCCATGATCGACAAGA 309
consensus_9676#4 GAGGG--CACG-GTCGGCGAA--CGTTCCATC-GACA--TTGATTCCATGATCGACAAGA 298
consensus_9676#0 GANGG-GCACG-GTCGGCGAA--CGTTCCATACGACA--TTGATTCCATGATCGACAAGA 313
** * **** ********* *** *** *** *********************
consensus_9676#1 A-AACGAG-CATATT-TCCCGATGCCAACACACCGA--C-TCCCTGATCAAT--GGGGTA 393
consensus_9676#2 A-AACGAG-CATATT-TCCCGATGCCAACACACCGA--CCTCCCTGATCAAT--GGGGTA 369
consensus_9676#3 A-AACGAG-CATATT-TCCCGATGCCAACACACTGAAACTCCCTGNATCAAT--GGGGTA 364
consensus_9676#4 A-AACGAG-CATATT-TCCCGATGCCAACACACCGA--CCTCCCTGATCAAT--GGGGTA 351
consensus_9676#0 ACAACGAGACATATTATCCCGATGCCAACAGACCTGA-CCTCCCTGATCAACTGGGNGTA 372
* ****** ****** ************** ** * ** ***** ** ***
consensus_9676#1 CC-GTTCAACGAG-AT-ACCGAT-TTGCCACAT-CCGC--GTGTCACCGAACAA-TAC-A 444
consensus_9676#2 CC-GTTCAACGAG-AT-ACCGAT-TTGCCACAT-CCGC--GTGTCACCGAACAA-TACCA 421
consensus_9676#3 CCTGTTCAACGAG-ATTACCGAT-TTGGCACATTCCGC--GTGTCACCGAACAA-TACCA 419
consensus_9676#4 CC-GTTCAACGAG-AT-ACCGAT-TTGCCACAT-CCGC--GTGTCACCGAACAA-TACCA 403
consensus_9676#0 CCGNTCACACGAGCATACCNGATCTTGCCACCATCCGCCGNTGTCACCGAACAAATACCA 432
** * ***** ** * *** *** *** **** ************* *** *
consensus_9676#1 T---CATTTCGATCAC----GGAT--GCC----AAGGGTGT-GCCACAGT-TTAT---CC 486
consensus_9676#2 T---CATTTCGATCAC----GGAT--GCC----AAGGGTGT-GCCACAGT-TTAT---CC 463
consensus_9676#3 T---CATTTCGATCAC----GGATT-GCC----AAGGGTGTTGCCACAGTATTATA--CC 465
consensus_9676#4 T---CATTTCGATCAC----GGAT--GCC----AAGGGTGT-GCCACAGT-TTAT---CC 445
consensus_9676#0 TACATNNTTCGATCACCCGAGAATTTGCCCCCAAAGGGGGGATTGGTAGCCCCACGCACG 492
* ********* * ** *** ***** * ** * *
consensus_9676#1 GC-TCGTGCGGCATCGAGGG-------CTTCAAGAACACGCGCAAAGGCACGAACATTGC 538
consensus_9676#2 GC-TCGTGCGGCATCGAGGG-------CTTCAAGAACACGCGCAAAGGCACGAACATTGC 515
consensus_9676#3 GN-TCGTGCGGNATCNAAGNG----GCTTCCAAGAACACGCGCAAAGGCACGAACATTGC 520
consensus_9676#4 GC-TCGTGCGGCATCGAGGGC--------------------------------------- 465
consensus_9676#0 GCATCTCTAAATACCCGGGCCTAACGGCTGGCAGGGGGCACTNACCGACACGGGCGNCNT 552
* ** * * *
consensus_9676#1 GGCCGCAG-GCGAC-GCAATCAG-AT----CAG-ACGAGGGCG---ATC--GAACGTGGC 585
consensus_9676#2 GGC-GCAG-GCGACCGCAATCAGCAT----CAGCACGAGGGCG---ATC--GAACGTGGC 564
consensus_9676#3 GGC-GCAGTGCGAACG-AATCAG-AT----CAGCACGCAGGTGCTGATC--GAACGTGGC 571
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 N-CTCCAACAGGAACACACCCACCGCACCGCACCACAANAGCGGACAACACGNACACCAC 611
consensus_9676#1 -TACAAAACGG--TTCGCGTCACGGTCC-GAGGGCTCGGC--CTGGGACGAATGTCCGCT 639
consensus_9676#2 -TACAAAACGG--TTCGCGTCACGGTCC-GAGGGCTCGGC--CCGGGACGAATGTCCGCT 618
consensus_9676#3 GTACAAAACNGGTTCTGCGTCACGGTCCCGAGGCCTCGGCGCCGGGGACGAATGTCCGCT 631
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 ATANCNGGCCGGCCCCGCCACANCGACG-GAAAACCCGGC--CAANAATCCAAG-CAACT 667
consensus_9676#1 ATAAAC---GGGGCTCGAGATGGCTGGGCTTGAACATTG-TATCCATTACGNGACACGAC 695
consensus_9676#2 ATAAA----GGGGCTCGAGATGGCTGGGCT-GAACATTG-TTTCCATTACGG-ACACGAC 671
consensus_9676#3 ATTAACATGGGGNTACGAGA---------------------------------------- 651
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 CCAAGC----CAACCCAGNAAGGCNGACCACGAAAACCGACGACNACCGGACATCGAGGC 723
consensus_9676#1 CC-GGTATCGTG---GAATCCCCCCCGTCC-AGAAAGCAAAGGAAGCTGTAACACATGTG 750
consensus_9676#2 CCCGGTATCGTG---GAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAA--TGTG 726
consensus_9676#3 ------------------------------------------------------------
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 CCANAAACAANAACAGAANCCAGGGGNACACCAGAGCCAGCANACACCGGCAACCCCGNG 783
consensus_9676#1 GTGAAATTGTGGC-C-GTGCTGAG-AGGTGGANTT--ACACTCTGTCATCATACCGTCAT 805
consensus_9676#2 GCGAAATTGTGGC-CCGTGCTGAGGAGGTGGAATTTAACACTCTGTCATCATACCGTCAT 785
consensus_9676#3 ------------------------------------------------------------
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 AAAGGGGAGCACCGCGNNGACCACCAGGNCNGACAGGAAACACGGTNCCCGCNCACCAAC 843
consensus_9676#1 GCCATCGCAAATGACGCGCAATTGGAAAACNGCCGNCATNCACCTATCNNTACTTNCCCC 865
consensus_9676#2 GCCATCGCAAA-GACGCGCA--TGGAAAGCCGCCTTCCTCCTCT--NCCACGTGTGCATC 840
consensus_9676#3 ------------------------------------------------------------
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 ACGAAAGCGCGGGCAGCGACAGCAGCAAGCAACANGGGGCCTCGGNACAGC-CCTGGCCA 902
consensus_9676#1 AACGTTGGTTNGCCTTTCAAACCGTCGTCTACCAGTACGGACACGGAACGGGCCAATCTA 925
consensus_9676#2 AACGT--GTTACAGTTTTGTTTGATTGTTTATTTTAAAAAATAGTAATAAAATTAAAATT 898
consensus_9676#3 ------------------------------------------------------------
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 AACACAACATTCCGGGNAACGCACCCCACCACCCCCGCAACCCCACCACAAACCCACCCC 962
consensus_9676#1 TCAACAC--AAACCTNAACGTCACTNCCAACACTTANANNAAATCACTAAANCAC----- 978
consensus_9676#2 CTAGCACCAAAAAATNAACAAAANGAC-AGCATGTGCG---------------------- 935
consensus_9676#3 ------------------------------------------------------------
consensus_9676#4 ------------------------------------------------------------
consensus_9676#0 GGAACGN-AAAACCCCAGCGGCGAAACANACCCCCACCCCCCCGCGNNCTACCCCACGCA 1021
consensus_9676#1 ------
consensus_9676#2 ------
consensus_9676#3 ------
consensus_9676#4 ------
consensus_9676#0 CAACAC 1027
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||