cluster # 97

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Anopheles gambiae
cluster # 97 cluster # 97 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_97#0 length = 508 sequences # 1

consensus_97#1 length = 392 sequences # 1

consensusID : consensus_97#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 508
fasta sequence

                              [GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAACGCCGTGAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCCGTGAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGCCGAACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGACGTGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTGCTAGAGGTGTATCAGTTACAGCCATTTAGAGGGATGATGTAAAGAGAGAAGAAAATGAATCAAATCAAATAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAGCCTCTTAGCAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACCAACACCCAACACACCCCGCAGCCGCAGTGGTGCGCC]

[+] EMBL BX617315             [GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAACGCCGTGAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCCGTGAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGCCGAACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGACGTGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTGCTAGAGGTGTATCAGTTACAGCCATTTAGAGGGATGATGTAAAGAGAGAAGAAAATGAATCAAATCAAATAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAGCCTCTTAGCAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACCAACACCCAACACACCCCGCAGCCGCAGTGGTGCGCC]




>consensus_97#0
GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAACGCCGT
GAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCCGT
GAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGCCG
AACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGACG
TGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTGCT
AGAGGTGTATCAGTTACAGCCATTTAGAGGGATGATGTAAAGAGAGAAGAAAATGAATCA
AATCAAATAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAGCCTCTTAG
CAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACCAACACCCA
ACACACCCCGCAGCCGCAGTGGTGCGCC

consensusID : consensus_97#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence

                              [CCGCCCACGCGTCCGACCGGATATCAAGAGCCCCCAGCAGCCAGATGCGCCGGCACCAACGCCGGTCACCACCGCCCCGGCCGTAGAGCGCCGATCGGTGCTATCGCTCAAGATCGACGACGATGCGCACGTGCGTCGGATGTTCGATAAGTTCCGGCACCATCATCGCCGTCAGTACGCTAGCTCGATGGAGCATGAGATGCGCTTCAACATCTTCCGCAACAATCTGTTCAAGATCGAGCAGCTGAACAAGTTCGAGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACATGACGGGGGCCGAGTATCGGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAACCACGTCGGCAACCGGGTGGCCTCGGAGGAGG]

[+] EMBL BM599883             [CCGCCCACGCGTCCGACCGGATATCAAGAGCCCCCAGCAGCCAGATGCGCCGGCACCAACGCCGGTCACCACCGCCCCGGCCGTAGAGCGCCGATCGGTGCTATCGCTCAAGATCGACGACGATGCGCACGTGCGTCGGATGTTCGATAAGTTCCGGCACCATCATCGCCGTCAGTACGCTAGCTCGATGGAGCATGAGATGCGCTTCAACATCTTCCGCAACAATCTGTTCAAGATCGAGCAGCTGAACAAGTTCGAGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACATGACGGGGGCCGAGTATCGGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAACCACGTCGGCAACCGGGTGGCCTCGGAGGAGG]




>consensus_97#1
CCGCCCACGCGTCCGACCGGATATCAAGAGCCCCCAGCAGCCAGATGCGCCGGCACCAAC
GCCGGTCACCACCGCCCCGGCCGTAGAGCGCCGATCGGTGCTATCGCTCAAGATCGACGA
CGATGCGCACGTGCGTCGGATGTTCGATAAGTTCCGGCACCATCATCGCCGTCAGTACGC
TAGCTCGATGGAGCATGAGATGCGCTTCAACATCTTCCGCAACAATCTGTTCAAGATCGA
GCAGCTGAACAAGTTCGAGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACAT
GACGGGGGCCGAGTATCGGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAA
CCACGTCGGCAACCGGGTGGCCTCGGAGGAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_97#0      GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAAC--GCC 58
consensus_97#1      -----------------CCGCCC----ACGCGTCCGACCGGATATCAAGAGCCCCCAGCA 39
                                     *****       *** *     * *  **  ***   *  ** 

consensus_97#0      GTGAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCC 118
consensus_97#1      GCCAGATGCGCCGGCACCAACGCCG--GTCACCACCGCCCCGGCCGTAGAGCGCCGATCG 97
                    *  **   ****** *  * *****     *** ***    * ***  * *   * * * 

consensus_97#0      GTGAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGC 178
consensus_97#1      GTG----CTATCGCTCAAG-----ATCGACGACGATGCGCACGTGCGTC-----GGATGT 143
                    ***    * * ***  ***      **** ***   *   * *  ****     * * * 

consensus_97#0      CGAACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGA 238
consensus_97#1      TCGATAAGTT-CCGGCACCATCATCGCCGTCAGT-ACGCTA-GCTCGATGGAGCATGAGA 200
                       * *  *  **   ** * ** **     **  ***  * *  **  **     * **

consensus_97#0      CGTGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTG 298
consensus_97#1      TGCGCT--TCAACATCTTCCGCAACAATCTGTTCAAGATCGAGCA-GCTGAACAAGTTCG 257
                     * *    ** * **  **  *  ***   ** **      *  * * *******    *

consensus_97#0      CTAGAGGTGTA-TCAGTTACAGCC--ATTTAGAGGGATGATGTAAAGAGAGAAGAAAATG 355
consensus_97#1      AGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACATGACGGGGGCCGAGTATC 317
                       * ***     **  *** *    *   **   *  **  * * * * *  **  ** 

consensus_97#0      AATCAAATCAAA---TAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAG 412
consensus_97#1      GGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAACCACGTCGGCAACCGGG 377
                       *  *        *    *  *   * ****   **     **    **  *  *  *

consensus_97#0      CCTCTTAGCAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACC 472
consensus_97#1      TGGCCTCGGAGGAGG--------------------------------------------- 392
                       * * * *  ***                                             

consensus_97#0      AACACCCAACACACCCCGCAGCCGCAGTGGTGCGCC 508
consensus_97#1      ------------------------------------