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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9701#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1474 fasta sequence
[CCGCCCACGCGTCCGGTTTTGTTGCGT-GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC-TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC-AGCGCAATG-CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGCACTGCCGCTGTTCATCTTCCCGTTCACGATCAATTTCCCGGGCGCCATTCTGTGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTT-CTGCGGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAACGCTGCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGAAAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCGGCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACAGCACCACGAACGGGCACCTCCAGCGCGGTTAATGCGAAAAAGCGGTAATGCCCACGATCGGATAACTTCACACAGTGTAAAACCAAACCACTTCTACAGTAGCGTGCATGCAGTAATGCAATAAAACATCCAACTCCTGG]
[+] EMBL BM597710 [CCGCCCACGCGTCCGGTTTTGTTGCGT GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGACGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATGACGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGA ]
[+] EMBL CNS09DXE [ TTGTTGCGT GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGC GAAACATTTTCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTACAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACA CCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAAAAAAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGCACTGCCGCTGTTCATCTTCCCGTT ]
[+] EMBL BM611286 [ ccgGCGT GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGAAAGCATTTTCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTACAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGA CGAAa ]
[+] EMBL BM623030 [ ccgcggacGCGTGGGTTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGAAAGCATTTTCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTACAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGC ]
[+] EMBL BM633794 [ ccg GATTTTTGCCCTGCACACCCGCTCAATTCTACAACTTTTTTTTCAGCATTTTCACTGAAAGTAAGCGGCAAAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCAGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGT ]
[+] EMBL BX617662 [ GCACACCCGCTCAATTCTACAACTTTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGAAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCTGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATC ]
[+] EMBL BM596290 [ ccgCCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCTCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTt ]
[+] EMBL BM599615 [ ccgCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCATAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAA ]
[+] EMBL BM652451 [ CTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCTCCCGTCAAACCCATCACGGC ]
[+] EMBL BX627607 [ AGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCTCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTTGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTATATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAA CTGAACCCGCTCAA NACATGCTCGTAC ]
[+] EMBL BX609611 [ ACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATG ]
[-] EMBL CNS09DXF [ TCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCCAAGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACTTTTACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGAACTGCCGCTGTTCATCTTCCCGTTCACGATCAATTTCCCGGGCGCCATTCTGTGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTT CTGCGGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAACGCTGCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGAAAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCGGCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACAGCACCACGAACGGGCACCTCCAGCGCGGTTAATGCGAAAAAGCGGTAATGCCCACGATCGGATAACTTCACACAGTGTAAAACCAAACCACTTCTACAGTAGCGTGCATGCAGTAATGCAATAAAACATCCAACTCCTGG]
[+] EMBL BX616797 [ TCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGCACTGCCGCTGTTCATCTTTCCGTTCACGATCAATTTCCCGGGCGCCATTCTATGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTTCCTGCGGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAACACTTCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGAAAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCGGCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACGGCACCACGAACGGGCACCTCCAGCGC ]
consensusID : consensus_9701#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 767 fasta sequence
[CGTTCAAAGTGGTTTAGAATTAATCTATGGCGCCCCTCCGAAGCCGTTGCATCATGCCCCATCTTACGGGTAGGTGTCTGGACCAGGTGGGCGAGAAGATGATCGGAAAAGTTGCTCGTGGAATAGCAAAACAAAGAATCGGTGCAGTACTGCTACTCCTGGTGCTTTCGCTTTCAAATGCCCATCACAGTGGAAAATGCAATGCCGTGTGGTGTATGTGGTGCTCCATTAGTGGTGCAGAAATCATTTTCACCCGATTCGATGATCTCAATTACACCACCGTGTCTCGTTAAAATGAGGGGTGGTCAGTGTGAAAAGCTCCTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCCCTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGCTAATTCAAATGGCCTTAAGCGATCGCGTCA--GTAGAGTGAACGAATAGCAATCGCTCTCGCCGGGGTCTGTTCTCGGCCTCTAAACGATAATGCACAACGCGGCTTGGGAGAGACAGTATGCACACATATGCGCATCGCCGTGTGCATCTTCGACCTTTTGCACAAATGTGCAGCCAGCCGGAGGACGACAACTGGAGTTGGTCTGGTTTTGTTGCCAGCCGGAGGAACGGGTCGTTTCTCGAGCGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAA]
[+] EMBL CNS09QRU [CGTTCAAAGTGGTTTAGAATTAATCTATGGCGCCCCTCCGAAGCCGTTGCATCATGCCCCATCTTACGGGTAGGTGTCTGGACCAGGTGGGCGAGAAGATGATCGGAAAAGTTGCTCGTGGAATAGCAAAACAAAGAATCGGTGCAGTACTGCTACTCCTGGTGCTTTCGCTTTCAAATGCCCATCACAGTGGAAAATGCAATGCCGTGTGGTGTATGTGGTGCTCCATTAGTGGTGCAGAAATCATTTTCACCCGATTCGATGATCTCAATTACACCACCGTGTCTCGTTAAAATGAGGGGTGGTCAGTGTGAAAAGCTCCTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCCCTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGCTAATTCAAATGGCCTTAAGCGATCGCGTCA GTAGAGTGAACGAATAGCAATCGCTCTCGCCGGGGTCTGTTCTCGGCCTCTAAACGATAATGCACAACGCGGCTTGGGAGAGACAGTATGCACACATATGCGCATCGCCGTGTGCATCTTCGACCTTTTGCACAAATGTGCAGCCAGCCGGAGGACGACAACTGGAGTTGGTCTGGTTTTGTTGCCAGCCGGAGGAACGGGTCGTTTCTCGAGCGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAA]
[-] EMBL CNS09QRV [ CGTGGAATAGCAAAACAAAGAATCGGTGCAGGAATGCTACTCCTGGTG TTTCGCTTTCAAATGCCCATCACAGTGGAAAATGAAATGCCCTGTGGTGTATTTGGTGCTCCATTAGTGGTGCAGAAATCATTTTTACCCGATTCGATGTTTTCAATTACACCACCCTTTCTCGTTAAAATGAGGGGTGGTCAGTGTGAAAAGCT CTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCCCTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGCTAATTCAAATGGCCTTAAGCGATCGCGTCAGCGTA AGTGAACGAATAGAAATTGCTCTCGCCG ]
consensusID : consensus_9701#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence
[CCCCGAGGTTTTGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCCAGCGCAATGCGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCCGGCGCAACATGCAAACGGNCAAGTACATTCTTGCGCGCACTGCCGCTGTTCATCTTTCCGTTC]
[+] EMBL AL693728 [CCCCGAGGTTTTGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCCAGCGCAATGCGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCCGGCGCAACATGCAAACGGNCAAGTACATTCTTGCGCGCACTGCCGCTGTTCATCTTTCCGTTC]
consensusID : consensus_9701#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 460 fasta sequence
[ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAATGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAAATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATTTTCCCAGGAG]
[+] EMBL CNS08VWS [ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAATGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAAATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATTTTCCCAGGAG]
consensusID : consensus_9701#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 438 fasta sequence
[ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAACGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAGTTGGATGTTTTATTGCATTACTGCATG]
[+] EMBL BX609524 [ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAACGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAGTTGGATGTTTTATTGCATTACTGCATG]
[+] EMBL BX615563 [ATCCGTTCGATGAGCTGGAAATCTTCGACATAATCCGCAACATCAACGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 CCGCCCACGCGTCCGGTTTTGTTGCGTGATTTCTGCCCTGCACACCCGCTCAATTCTACA 60
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 ACTTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGA 120
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 AAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTT 180
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 TGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATT 240
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ---CGTTCAAAGTGGTTTAGAATTAATCTATGGCGCCCCTCCGAAGCCGTTGCATCATGC 57
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 GCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATC 300
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 CCCATCTTACGGGTAGGTGTCTGGACCAGGTGGGCGAGAAGATGATCGGAAAAGTTGCTC 117
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 ACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTG 360
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 GTGGAATAGCAAAACAAAGAATCGGTGCAGTACTGCTACTCCTGGTGCTTTCGCTTTCAA 177
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 GAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATT 420
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ATGCCCATCACAGTGGAAAATGCAATGCCGTGTGGTGTATGTGGTGCTCCATTAGTGGTG 237
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 GTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGC 480
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 CAGAAATCATTTTCACCCGATTCGATGATCTCAATTACACCACCGTGTCTCGTTAAAATG 297
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 ATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGC 540
consensus_9701#2 -----------------------CCCCGAGGTTTTGCTCGACCTGCCGTGGTGGGGCTGC 37
consensus_9701#1 AGGGGTGGTCAGTGTGAAAAGCTCCTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCC 357
consensus_9701#3 ------ATCCGTTCGATGA-GCGGGAAATCTTCGACATAATC-CGCAACATCAATGATCC 52
consensus_9701#4 ------ATCCGTTCGATGA-GCGGGAAATCTTCGACATAATC-CGCAACATCAACGATCC 52
consensus_9701#0 ATCGCGATCGGTACGGTCT-GCGTGCGAACGCTGCTGTTCCCGCTCGTCATTG-CGTCCC 598
consensus_9701#2 ATCGCGATCGGTACGGTCT-GCGTGCGAACGCTGCTGTTCCCGCTCGTCATTG-CGTCCC 95
consensus_9701#1 CTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGC-TAATTCAAATGGCCT 416
* * * * * * * * * * * *
consensus_9701#3 GGAACA-TCCTCTCAC---GCTGGAAGAACTGCA--CGTCCTGGAGCAGAGTCTCATCAC 106
consensus_9701#4 GGAACA-TCCTCTCAC---GCTGGAAGAACTGCA--CGTCCTGGAGCAGAGTCTCATCAC 106
consensus_9701#0 AGCGCAATGCGGCCAA---GATG-AACAACTACA--TGCCACAGCTGCAGGT---GCTGC 649
consensus_9701#2 AGCGCAATGCGGCCAA---GATG-AACAACTACA--TGCCACAGCTGCAGGT---GCTGC 146
consensus_9701#1 TAAGCGATCGCGTCAGTAGAGTGAACGAATAGCAATCGCTCTCGC-CGGGGTCTGTTCTC 475
* * ** ** * ** ** * * ** *
consensus_9701#3 GG----TGGATAATGA-GAAGAACATCGTC-----AACATCCTGTTCACACCGA--C-CA 153
consensus_9701#4 GG----TGGATAATGA-GAAGAACATCGTC-----AACATCCTGTTCACACCGA--C-CA 153
consensus_9701#0 AG----ATGAAGATGA-CCGAAGCGCGGCA-----GGCGGGCAATGCG-ATCGATTC-CG 697
consensus_9701#2 AG----AT-AAGATGA-CCGAAGCGCGGCA-----GGCGGGCAATGCG-ATCGATTC-CG 193
consensus_9701#1 GGCCTCTAAACGATAATGCACAACGCGGCTTGGGAGAGACAGTATGCACACATATGCGCA 535
* * ** * * * * * * * * * *
consensus_9701#3 TCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAG-CTTCTCCGG 212
consensus_9701#4 TCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAG-CTTCTCCGG 212
consensus_9701#0 CCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAAC-CCGCTCAAG 756
consensus_9701#2 CCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAAC-CCGCTCAAG 252
consensus_9701#1 TCGCCGTGTGCATCTTCGACCTTTTGCACAAATGTGCAGCCAGCCGGAGGACGACAACTG 595
* ** ** * ** * * *
consensus_9701#3 GCGCTGCCT---CCGCGCTTCAAGGTGTCGGTAGAAATCAACCCCGGCACGCACGCATCC 269
consensus_9701#4 GCGCTGCCT---CCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCC 269
consensus_9701#0 AACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGC 816
consensus_9701#2 AACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGC 312
consensus_9701#1 GAGTTGGTCTGGTTTTGTTGCCAGCCGGAGGAACGGGTCGTTTCTCGAGCGCACGCATCC 655
** * ** * * * * *
consensus_9701#3 GAGC------ACGCGGTGAACAAGCAGCTGACCGACAAGGAACG--TGTGGCGGCCGCAC 321
consensus_9701#4 GAGC------ACGCGGTGAACAAGCAGCTGACCGACAAGGAACG--TGTGGCGGCCGCAC 321
consensus_9701#0 GAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGAT 876
consensus_9701#2 GAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGAT 372
consensus_9701#1 GAGC------ACGCGGTGAACAAGCAGCTGACCGACAAGGAACG--TGTGGCGGCCGCAC 707
*** ** ** * * ** * ** **** * * * *** ** *
consensus_9701#3 TGGAAAACACGCACCTGAT---GGAGGTTATCAATCAGTGT-ATCGGAACGCCGTTGAAA 377
consensus_9701#4 TGGAAAACACGCACCTGAT---GGAGGTTATCAATCAGTGT-ATCGGAACGCCGTTGAAA 377
consensus_9701#0 TTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCT 936
consensus_9701#2 TTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCT 432
consensus_9701#1 TGGAAAACACGCACCTGAT---GGAGGTTATCAATCAGTGT-ATCGGAACGCCGTTGAAA 763
* ** * ** * * * ** * **** * * **** ***
consensus_9701#3 TAAACCGAACCGAGGGCCCTGTTCCTCCAAGGA-AAAAAAAAAAAAAAAAAAAAAAAAAA 436
consensus_9701#4 TAAACCGAACCGAGGGCCCTGTTCCTCCAAGGA-GTTGGATGTTTTATTGCATTACTGCA 436
consensus_9701#0 ACGATCGAGCT--CGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCA 994
consensus_9701#2 ACGATCGAGCT--CGGCACGGACAGTGCGCGAATGTCCGGCGC-AACATGCAAACGGNCA 489
consensus_9701#1 TAAA-------------------------------------------------------- 767
*
consensus_9701#3 AAAAAGGCCAAATTTTCCCAGGAG------------------------------------ 460
consensus_9701#4 TG---------------------------------------------------------- 438
consensus_9701#0 AGTACATTCT-GCGCGCACTGCCGCTGTTCATCTTCCCGTTCACGATCAATTTCCCGGGC 1053
consensus_9701#2 AGTACATTCTTGCGCGCACTGCCGCTGTTCATCTTTCCGTTC------------------ 531
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 GCCATTCTGTGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTTCTGC 1113
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 GGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAA 1173
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 CGCTGCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGA 1233
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 AAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCG 1293
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 GCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACAGCACCACGAACGGGCACCT 1353
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 CCAGCGCGGTTAATGCGAAAAAGCGGTAATGCCCACGATCGGATAACTTCACACAGTGTA 1413
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 ------------------------------------------------------------
consensus_9701#4 ------------------------------------------------------------
consensus_9701#0 AAACCAAACCACTTCTACAGTAGCGTGCATGCAGTAATGCAATAAAACATCCAACTCCTG 1473
consensus_9701#2 ------------------------------------------------------------
consensus_9701#1 ------------------------------------------------------------
consensus_9701#3 -
consensus_9701#4 -
consensus_9701#0 G 1474
consensus_9701#2 -
consensus_9701#1 -
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||