cluster # 9708

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Anopheles gambiae
cluster # 9708 cluster # 9708 Sequences # 20 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9708#0 length = 1256 sequences # 17

consensus_9708#1 length = 632 sequences # 2
consensus_9708#2 length = 100 sequences # 1

consensusID : consensus_9708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1256
fasta sequence

                              [TTTTTGAGGTAAAAAGAGTATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT-AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG-TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG-GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC-CGTCCGT-CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA-CCGCAATG-CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG-CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC-TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGA-GAATAATGTACACACGACTTGAGTTTGTTTGCA-AGCGCGGGCGGGCATCTGGCTNAGGAATT]

[+] EMBL CNS09GA6             [TTTTTGAGGTAAAAAGAGTATTGATTGTTTATGGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX615017             [              AGAGCATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGACTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGTTTGAAGCGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09EVY             [                      GATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTGTGTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATTA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGAATCGGCAGAACGGTAGTTGAAAGGCTTTCGCGTAACACGGCAACCAC                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09LNP             [                      GATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAA                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09PK1             [                                TGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTGTTAAACGCCATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM586439             [                                                     ATCTTTGAGGCCCTGAATGGTAACGCACCCTAAAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAACAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTATTCCGTTAGCTGTTCAAATAGCTGGCCCACGCTGTACGCATCATACGAAAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATAAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGTTTGAAGCGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC Ccgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09LNO             [                                                                                                                                                                                                                                                           ACATTTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGTCCCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCG TATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG                                                                                                                                                        ]
[-] EMBL CNS09EVX             [                                                                                                                                                                                                                                                                               TCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG TGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT ACGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTCTTCAGGAATGCTTGCATC TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAAACAAAAAATGA GAATAATGTACACACGACTTGA                                         ]
[+] EMBL CNS09E7X             [                                                                                                                                                                                                                                                                                                                                               CCACGCCGGACATCTCCAGTATTTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCACCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATTTTCTCCTCCCCCAGCGGTTTGAAGCGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGGGCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS09E7W             [                                                                                                                                                                                                                                                                                                                                                                 GTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCACCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGTTTGAAGCGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG TGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG                                                                                                                                                        ]
[-] EMBL BM599036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTCAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCATACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC GTTGTGTTGTGAGAATGGACCGGGAAATACGAGGTTTAACAAAATTAAGACAAAAAATGA GAATAATGTACACACGACTTGAGTTTGTTCGGA CGCGTGGGCGG                  ]
[-] EMBL CNS09GA5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTACACGTCCGT CCCCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGACCCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCGCCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG                                                                                                                                                        ]
[-] EMBL BX602713             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGA GAATAATGTACACACGACTTGAGTTTGTTTGCA A                            ]
[-] EMBL BM593100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATGCCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGA GAATAATGTACACACGACTTGAGTTTGTTTGCA ACAGCGCGCGG                  ]
[-] EMBL CNS09PK0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTGGCGGGACGGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCG TATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG                                                                                                                                                        ]
[-] EMBL BX602333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTCGCTTGGTTGCTGTTGTTGTGCCGCTTTCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCGGTTTTCAGGATTGCTTGCTTC TTTGTGTTGTAAGAAT                                                                                                            ]
[-] EMBL BX469362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCCCGTGGTGCGACCAGTTTT AGGAATGCTTGCATCNTTTGTGTTGTAAGAATGAACCAGG AAAACGAGGTTTAACAAAATTAAGACAAAAAATGAGGAATAATGTACACACGAC TGAG TTG TTGCACAGCtnatctctgcatctggctnaggaatt]




>consensus_9708#0
TTTTTGAGGTAAAAAGAGTATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTG
AGAGCCTGAATGGTAACGCACCCTAAATCCATGATTTGAATATATTCCGACCCTCCGCCA
TGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTA
AGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTAC
GCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCAC
ACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCC
TGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATC
GCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTGTAAACGCCATCGTCCACA
GTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGC
GGCTTGAAACGAAACTTGGTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG
TTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCG
GCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGA
CAGGGCTTACCGTCCGTCCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTG
TTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTG
AACATGTCGCCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCG
GGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACG
GCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACC
CATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGG
CCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTG
TTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGAGAATAA
TGTACACACGACTTGAGTTTGTTTGCAAGCGCGGGCGGGCATCTGGCTNAGGAATT

consensusID : consensus_9708#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 632
fasta sequence

                              [CAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGC-CTGCGCTG-CGTG-CGTCATCGCGTCGGCC-TCAT-CCAGGAT-G-ACGATTTTGAACGGTGGACAGGGCTTACCGTCCGT-CCGCGTCCCGCTCGCCGTCAG-CTGG-GCGAACGTTTTCACCTTGTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGACTTGAGTTTGTTTGCAACAGCACGA-TCTGCGG]

[-] EMBL BM591726             [CAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGC CTGCGCTG CGTG CGTCATCGCGTCGGCC TCAT CCAGGAT G ACGATTTTGAACGGTGGACAGGGCTTACCGTCCGT CCGCGTCCCGCTCGCCGTCAG CTGG GCGAACGTTTTCACCTTGTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGACTTGAGTTTGTTTGCAACAGCACGA TCTGCGG]
[-] EMBL BX469792             [                                             cCGGCTCTGCGCTGCCGTGCCGTCATCGCGTCGGCCTTCATCCCAGGATNGCACGATTTTGAACGGTGGACAGGGCTTACCGTCCGTCCCGCGTCCCGCTCGCCGTCAGNCTGGCGCGAACGTTTTCACCTTGTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGACTTGAG TTG  TCCACGTGC CGATTCTGCc ]




>consensus_9708#1
CAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCG
TGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTACCG
TCCGTCCGCGTCCCGCTCGCCGTCAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGACC
GCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCG
AACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTAC
AGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCC
GCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTG
TGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAG
CTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGG
ACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGA
CTTGAGTTTGTTTGCAACAGCACGATCTGCGG

consensusID : consensus_9708#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 100
fasta sequence

                              [GTGTTAGTAAAACTTTATTACTCTCTCTTGCAGGAATGTTGCTTCCGATTACATGGGGGAGGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGTTA]

[+] EMBL CNS08V7J             [GTGTTAGTAAAACTTTATTACTCTCTCTTGCAGGAATGTTGCTTCCGATTACATGGGGGAGGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGTTA]




>consensus_9708#2
GTGTTAGTAAAACTTTATTACTCTCTCTTGCAGGAATGTTGCTTCCGATTACATGGGGGA
GGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9708#0      TTTTTGAGGTAAAAAGAGTATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTG 60
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      AGAGCCTGAATGGTAACGCACCCTAAATCCATGATTTGAATATATTCCGACCCTCCGCCA 120
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      TGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTA 180
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      AGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTAC 240
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCAC 300
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      ACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCC 360
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      TGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATC 420
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTGTAAACGCCATCGTCCACA 480
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGC 540
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GGCTTGAAACGAAACTTGGTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG 600
consensus_9708#1      ------------------------------------------------------------
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      TTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTT-CTCCATCGTGCGGCGCAGGGC 659
consensus_9708#1      ------------CAGAACCGTGTCGTTTTCGTTTCCTT-CTCCATCGTGCGGCGCAGGGC 47
consensus_9708#2      -------------------GTGTTAGTAAAACTTTATTACTCTCTCTTGCAG-GAATGTT 40
                                         ****   *     **  ** ***  ** *** * * * *  

consensus_9708#0      GGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGG 719
consensus_9708#1      GGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGG 107
consensus_9708#2      GCTTCCGATTACATGGGGGA--GGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGT 98
                      *        * * ** *  *  * *****  *        ** * *  ***    ** * 

consensus_9708#0      ACAGGGCTTACCGTCCGTCCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTT 779
consensus_9708#1      ACAGGGCTTACCGTCCGTCCGCGTCCCGCTCGCCGTCAGCTGGGCGAACGTTTTCACCTT 167
consensus_9708#2      TA---------------------------------------------------------- 100
                                                                                  

consensus_9708#0      GTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTT 839
consensus_9708#1      GTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTT 227
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GAACATGTCGCCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCC 899
consensus_9708#1      GAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCC 287
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACAC 959
consensus_9708#1      GGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACAC 347
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGAC 1019
consensus_9708#1      GGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGAC 407
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      CCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGG 1079
consensus_9708#1      CCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGG 467
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGT 1139
consensus_9708#1      GCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGT 527
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      GTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAA-TGAGAAT 1198
consensus_9708#1      GTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAAT 587
consensus_9708#2      ------------------------------------------------------------
                                                                                  

consensus_9708#0      AATGTACACACGACTTGAGTTTGTTTGCAAGCGCGGGCGGGCATCTGGCTNAGGAATT 1256
consensus_9708#1      AATGTACACACGACTTGAGTTTGTTTGCAACAGCA--CGATCTGCGG----------- 632
consensus_9708#2      ----------------------------------------------------------