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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9716#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1416 fasta sequence
[CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT-AGCAG-TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG-GCCATCCACTTCCTA-GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC--TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC-GA-GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTG-GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC-GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC-GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT-GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA-GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC-GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA----AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTA------AAAAAAAAAAAAA]
[+] EMBL CNS09HYR [CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT AGAAGTTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCGTCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGCGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGAGACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CAC GTCCGTAATCTAGGCCAGCCGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAA ]
[+] EMBL CNS09685 [ TTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT CAGTTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGGAGGCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGTGG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CACGGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAACTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTG ]
[+] EMBL BM605345 [ ccgaaaAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACCGAAAAAGCGT AGCAG TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACc ]
[+] EMBL CNS09L9A [ ggAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGTAAGC TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGAGCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCT ]
[+] EMBL CNS08IWW [ CTCACGAAAAATACTGAAAAAGCGT AAGTT TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGTAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCA GGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGA GATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGT ]
[+] EMBL BM585154 [ ccgGAAAAATACCGAAAAAGCGT AGCAG TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACCCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTGGTAACGATCGCGGGCATC ]
[+] EMBL CNS08GA0 [ CTGAAAAAGCGT CG AGCTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGTAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATCCGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGGAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGTGG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CACGGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTACGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACAC ]
[+] EMBL CNS09BRO [ GGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAA GGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTATGGCCAGCATC TCATAA ]
[+] EMBL BX619682 [ TCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTAGGAAGACTATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCGTTCATAACGGCTATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAa ]
[+] EMBL BX610349 [ CAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC TCATAACGGCTATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAAGGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACATTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAAAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTACCGAGGCGGAAAAGTTAAACCAACAGCG ]
[-] EMBL CNS08IWX [ GTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGAACTCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGAACTCAAGTCCGTTGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGTTCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTT ]
[-] EMBL CNS09HYS [ CGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGAACTCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGAACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCCGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTA AAAAAAAAAAAAA]
[-] EMBL CNS09BRP [ CTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCAGGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAGCACCTTTCTGTGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCTTTCTGCATGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGCAGAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATAGTGCTACTACTGCTGCCCTCG ]
[-] EMBL CNS08GA1 [ CGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGCCCCGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCCAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGTTCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCAACTGCCGAGGCGGAAAAGTTAAACCAACAGGGGAACAGC GGCAGTGCTCCGAAGTATTTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCTGGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAa ]
[+] EMBL BM603872 [ ccgCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTTCGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTACTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACGGACGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGGAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAGGAATACTTTTCTTCCTGTGA ]
[+] EMBL BX622336 [ CCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACATTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAAAAGCTGCAATCGACCGTACGGGCCACCCGGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTACCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCATAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATTTTCCTCACGAACGCGGACACGGATGGAAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACATTGCTGGAAGGCAAAGGCAACGGGAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAAAGAACGAAATAAAGCATTGCTTTTAGTGATACGTTCG ]
[-] EMBL CNS09L9B [ CTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTG ]
[-] EMBL CNS09686 [ TAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTAGTTTCTAAAAAAAAAAAA ]
[-] EMBL CNS094M5 [ AAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCAT ]
consensusID : consensus_9716#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence
[ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG]
[+] EMBL AL930097 [ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9716#0 CTGGATTGTTTACATTGGAGGAAATCAATCTA-TTTACAGCTCTTCGGGACCGCTCACGA 59
consensus_9716#1 -----------------------ATCGCCGAGGTTTACAGCTCTTCGGGAC-GCTCACGA 36
*** ****************** ********
consensus_9716#0 AAAATACTGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAG 119
consensus_9716#1 AAAATAC-GAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAG 95
******* ****************************************************
consensus_9716#0 TTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAA 179
consensus_9716#1 TTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAA 155
********************************************** ************
consensus_9716#0 CGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGG 239
consensus_9716#1 TGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGG 215
***********************************************************
consensus_9716#0 AACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTT 299
consensus_9716#1 AACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTT 275
************************************************************
consensus_9716#0 CCTAGAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATG 359
consensus_9716#1 CCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATG 335
****************** **** ****************************** *****
consensus_9716#0 CGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATCTCATAAC 419
consensus_9716#1 CGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAAC 395
********************************* **************************
consensus_9716#0 GGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAG 479
consensus_9716#1 GGCGATATTTGATCG--------------------------------------------- 410
***************
consensus_9716#0 CTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGAGCAGCTGGAAAGGGTGGAAAG 539
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 CATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGGACGTATACGAACCGGA 599
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 CGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTC 659
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 TGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCA 719
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 CGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGG 779
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 TAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTA 839
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 CGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCT 899
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 GGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCAC 959
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 CGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCGGCAGTGCTCC 1019
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 GAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCT 1079
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 GCGGATGGTGAAGCTGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAG 1139
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 CGGCAAAGGGCAGCTCGTTCTGCAGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGA 1199
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 GATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGT 1259
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 GAATAAGTTGAAGAATTTGCCACAGTGCGAAAAGCTAGTCCAAGAATACTTTTCTTCCTG 1319
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 TGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAACGAAATAAAGCATTGCTTT 1379
consensus_9716#1 ------------------------------------------------------------
consensus_9716#0 GAGTGATACGTTCGTGATGTTTTAAAAAAAAAAAAAA 1416
consensus_9716#1 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||