cluster # 9803

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Anopheles gambiae
cluster # 9803 cluster # 9803 Sequences # 21 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9803#0 length = 1682 sequences # 20

consensus_9803#1 length = 115 sequences # 1

consensusID : consensus_9803#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 1682
fasta sequence

                              [CCGCCCACGCGTCCGGTGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA-ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACGAGAAGGACAAAAAT-GGACCCTCGCACTGGTACCGGGTGGATGCGCGGTGCGGTGGTCGCTACCAAAGCCCCATCCTGCTCAACACGAGCAGCGCCCTGCTGGTGAACCGCAAGCGACCGCTCCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATGGCCATTCGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGG-CCGGTGCTGCGCGGGGGCCCGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGGTTGGGTCGGAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCACCTGGTGTTCTACA-ACGGGCTGTACGAGTCGTTCGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGGTCGGGCTGTTCTA-CGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT---TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCGTGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCTCCAGTCGCCGACCGGGCTGATGGTGAACAACTATCGCCCCGTGCAGAAGCTAAA-CCATCGCCGGGTGTTCCTGTACTGAGGTGATGGTGACGGTGGTGGTGATGCTGCAATTTGACTGAGAGCTGTGCATGAATGGGAACACACACAGCCGCAGA-CCCCGCTAGCTCCTCCGTAGCGATGAATACCAAAGGAAAACTGTGCTAGAGTTTAAGGACTTTTTCTTACCTGACATTTCGCCTCCTACTGCACACGCGAGCGCGCAGCGTGTGCAGCGGGCAAAGTATTATACGTTAGTGAAATACATTATTTGTTTTTATCCAGTGCAGCT]

[+] EMBL BM628391             [CCGCCCACGCGTCCGGTGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM576602             [            CCGGTGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACTGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM581929             [            CCGGTGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGGCGGCACCGGCAGCCGGCAGCTTCTCCTACAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM649271             [               ccGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM652823             [                    ccgCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACGAGAAGGACAAAAATGGGACCCTCGCACTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM619240             [                    ccgCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACGAGAAGGACAAAAAT GGACCCTCGCACTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08YAW             [                       CTCCAGCAAGTTCACTTACCGCATCTCGCGGCAG GTCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAA CCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACCCCCCGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX620139             [                                       TACCGCATCTCGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCTTCGGACAGGTTTACAAAAACAGTCAGCCCCGGNGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX624096             [                                                 CGCGGCAGCGGCAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX622228             [                                                               ACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGTCGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACGAGAAGGACAAAAAT GGACCCTCGCACTGGTACCGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX620247             [                                                                                                                                                                                TATCAGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCTAGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCGAGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGTCGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGGCCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCCCGAATCCGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGA ACGAACCCGAACCGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACGAGAAGGACAAAAAT GGACCCTCNCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09R2X             [                                                                                                                                                                                                                                                                                                                                          TTAT CTGCTAAATTTCCTGATGTT ATGTCGTGGCGACCGTGT GGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATCCTACCCGCCGATCGGCTGTCTTCGCTCCACCATCGTCCTACTACGATCAGTACGCAGCAGCCGGTCCGAAACCGCTCACCGCCGATCAGCGCCGGGCGAA CTGACCGCCCTCTCGAATCCGGACTTTTACTTCCCCGCCGATCCGGAGGCGGATCTAGCGGAAGCGACACGAACCCGAACCGGCGCTCGAGCGACAGAGGGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACGAGAAGGACAAAAAT GGACCCTCGCACTGGTACCGGGTGGATGCGCGGTGCGGTGGTCGCTACCAAAGCCCCATCCTGCTCAACACGAGCAGCGCCCTGCTGGTGAACCGCAAGCGACCGCTCCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATGGCCATTCGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGG CCGGTGCTGCGCGGGGGCCCGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGGTTGGGTCGGAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCACCTGGTGTTCTACA ACGGGCTGTACGAGTCGTTCGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGGTCGGGCTGTTCTA CGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT   TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAAGGCAGCCTGACGACACCG                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08O2E             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGTGGATGCGCGGTGCGGTGGTCGCTACCAAAGCCCCATCCTGCTCAACACGAGCAGCGCCCTGCTGGTGAACCGCAAGCGACCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS09R2Y             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCCATCCTGCTCAACACGAGCAGCGCCCTGCTGGTGAACCGCAAGCGACCGCTCCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATTGCCATTCGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGGCCCGGT CTGCGCGGGGGCCCGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGGTTGGGTCGGAGCACGTGTACGACTACCAGC GTACCCGATGGAGATCCACCTGGTGTTCTACA ACGGGCTGTACGAGTCGTTCGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGGTCGGGCTGTTCTA CGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT   TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCGTGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCTCCAGTCGCCGACCGGGCTGATGGTGAACAACTATCGCCCCGTGCAGAAGCTAAA CCATCGCCGGGTGTTCCTGTACTGAGGTGATGGTGACGGTGGTGGTGATGCTGCAATTTGACTGAGAGCTGTGCATGAATGGGAACACACACAGCCGCAGA CCCCGCTAGCTCCTCCGTAGCGATGAATACCAAAGGAAAACTGTGCTAGAGTTTAAGGACTTTTTCTTACCTGACATTTCGCCTCCTACTGCACACGCGAGCGCGCAGCGTGTGCAGCGGGCAAAGTATTATACGTTAGT                                 ]
[+] EMBL BM592471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccgCACGAGCAGCGCCCTGCCGGTGAACCGCAAGCGACCGCTGCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATGGCCATTCGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGG CCGGTGCTGCGCGGGGGCCCGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGGTTGGGTCGGAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCATCTGGTGTTCTACA ACGGGCTGTACGAGTCGTTTGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGGTCGGGCTGTTCTA CGAGATCTACGACCATGCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT   TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCGTGACGGAGAAGCAGATGAAGCAGTTCCGCCGGCCCCAGTCGCCGACCGGGCTGATG                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM576750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgGCGCCCTGCTGGTGAACCGCAAGCGACCGCTGCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATGGCCATTCGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGG CCGGTGCTGCGCGGGGGCCCGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGGTTGGGTCGGAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCACCTGGTGTTCTACA ACGGGCTGTACGAGTCGTTTGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGGTCGGGCTGTTCTA CGAGATCTACGACCATGCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT   TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCGTGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCT CAGTCGCCGACCGGGCTGATGGTG                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08YAX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCACCTGGTGTTCTACACACGGGCTGTACGAGTCGTTCGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGGTCGGGCTGTTCTA CGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT   TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCGTGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCTCCAGTCGCCGACCGGGCTGATGGTGAACAACTATCGCCCCGTGCAGAAGCTAAA CCATCGCCGGGTGTTCCTGTACTGAGGTGATGGTGACGGTGGTGGTGATGCTGCAATTTGACTGAGAGCTGTGCATGAATGGGAACACACACAGCCGCAGACCCCCGCTAGCCCCTCCGTAGCGATGAATACCAAAGG                                                                                                                                         ]
[-] EMBL CNS08ZNM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTCTACCGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCCGGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT   TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGT ACGT GATCtgcg                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM584635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgcgGACGCGTGGGTCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCCTGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCGTGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCTCCAGTCGCCGACCGGGCTGATGGTGAACAACTATCGCCCCGTGCAGAAGCTAAA CCATCGCCGGGTGTTCCTGTACTGAGGTGATGGTGACGGTGGTGGTGATGCTGCAATTTGACTGAGAGCTGTGCATGAATGGGAACACACACAGCCGCAGA CCCCGCTAGCTCCTCCGTAGCGATGAATACCAAAGGAAAACTGTGCTAGAGTTTAAGGACTTTTTCTTACCTGACATTTCGCCTCCTACTGCACACGCGAGCGCGCAGCGTGTGCAGCGGGCAAAGTATTATACGTTAGTGAAATACATTATTTGTTTTTATCCAGTGCAGCT]
[-] EMBL CNS08O2F             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACTATCGCCCCGTGCAGAAGCTAAACCCATCGCCGGGTGTTCCTGTACTGAGGTGATGGTGACGGTAGTGGTGATGCTGCAATTTGACTGAGAGC                                                                                                                                                                                                              ]




>consensus_9803#0
CCGCCCACGCGTCCGGTGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGG
CAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGT
CGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATC
AGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCT
AGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCG
AGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGT
CGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATC
CTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGG
CCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATC
CGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGAACGAACCCGAAC
CGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACG
AGAAGGACAAAAATGGACCCTCGCACTGGTACCGGGTGGATGCGCGGTGCGGTGGTCGCT
ACCAAAGCCCCATCCTGCTCAACACGAGCAGCGCCCTGCTGGTGAACCGCAAGCGACCGC
TCCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATGGCCATT
CGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGGCCGGTGCTGCGCGGGGGCC
CGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGG
TTGGGTCGGAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCACCTGGTGTTCT
ACAACGGGCTGTACGAGTCGTTCGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGG
TCGGGCTGTTCTACGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCC
GGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT
TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCC
TGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCG
TGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCTCCAGTCGCCGACCGGGCTGATGGTGA
ACAACTATCGCCCCGTGCAGAAGCTAAACCATCGCCGGGTGTTCCTGTACTGAGGTGATG
GTGACGGTGGTGGTGATGCTGCAATTTGACTGAGAGCTGTGCATGAATGGGAACACACAC
AGCCGCAGACCCCGCTAGCTCCTCCGTAGCGATGAATACCAAAGGAAAACTGTGCTAGAG
TTTAAGGACTTTTTCTTACCTGACATTTCGCCTCCTACTGCACACGCGAGCGCGCAGCGT
GTGCAGCGGGCAAAGTATTATACGTTAGTGAAATACATTATTTGTTTTTATCCAGTGCAG
CT

consensusID : consensus_9803#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 115
fasta sequence

                              [TTACAAAAACAGTCAGCCCCGGGGACGCGGCCACACATCTAATCAGCGTAACTTCCCGGGCCCCTCCCCCCCAGCGGGTAATTCTAGACGAACCACCTCTAGACGGCGGGGGTGC]

[+] EMBL BX601999             [TTACAAAAACAGTCAGCCCCGGGGACGCGGCCACACATCTAATCAGCGTAACTTCCCGGGCCCCTCCCCCCCAGCGGGTAATTCTAGACGAACCACCTCTAGACGGCGGGGGTGC]




>consensus_9803#1
TTACAAAAACAGTCAGCCCCGGGGACGCGGCCACACATCTAATCAGCGTAACTTCCCGGG
CCCCTCCCCCCCAGCGGGTAATTCTAGACGAACCACCTCTAGACGGCGGGGGTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9803#0      CCGCCCACGCGTCCGGTGCTAACCTCCAGCAAGTTCACTTACCGCATCTCGCGGCAGCGG 60
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CAGACAGGCACTCGCACCTGATCAGACACACAGATCAAGAAGCGCAAGCCAACCCACCGT 120
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CGGTCGTCGGACAGGTTTACAAAAACAGTCAGCCCCGGTGACGCGGCCACACATCTTATC 180
consensus_9803#1      ----------------TTACAAAAACAGTCAGCCCCGGGGACGCGGCCACACATCTAATC 44
                                      ********************** ***************** ***

consensus_9803#0      AGCGTAACTTCCCGGTCCCCCCCCCCCCCCCCAGCGGGTAATTCTAGACGATCCACCTCT 240
consensus_9803#1      AGCGTAACTTCCCGGGCCCCTCCCCC----CCAGCGGGTAATTCTAGACGAACCACCTCT 100
                      *************** **** *****    ********************* ********

consensus_9803#0      AGACGGCGTGTGTGCGCGACGTGTCGCGTGGGGTTTAATAAAACAACAGCAAAAAAACCG 300
consensus_9803#1      AGACGGCGGGGGTGC--------------------------------------------- 115
                      ******** * ****                                             

consensus_9803#0      AGATGCAGCTTCTCAAATGGCACGGGCAGCTTATCCTGCTAAACTTCCTGATGTTCATGT 360
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CGTGGCGACCGTGTCGGGGACTGAACGTTCCCAGCTATGATTCCAACTATCGGGCAAATC 420
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CTACCCGTCGATCGGCTGTCTTCGCTCAACCATCGTCCTACTACGACCAGTACGCAGCGG 480
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CCGGTCCGAAACCGCTCACCGCCGATCAGCGTCGGGCGAAGCTGACCGCCCTCTCGAATC 540
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CGGACTTTTACTTCCCCGACGATCCGGAGGCGGATCTAGCGGAAGCGAACGAACCCGAAC 600
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CGGCGCTCGAGCGACAGCGAGCCCGGCCGGCACCGGCAGCCGGCAGCTTCTCCTACAACG 660
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      AGAAGGACAAAAATGGACCCTCGCACTGGTACCGGGTGGATGCGCGGTGCGGTGGTCGCT 720
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      ACCAAAGCCCCATCCTGCTCAACACGAGCAGCGCCCTGCTGGTGAACCGCAAGCGACCGC 780
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TCCGGCTCGACGGGCAGACCAACCTGCCGCAAACGATACTGCTACAGAACGATGGCCATT 840
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CGGCCAAGTTTACGTACAACTGGCGCACCGGCGCTGATCGGCCGGTGCTGCGCGGGGGCC 900
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CGCTGAAAACCAAGTACCTGTTCGATCAGTTCCACTTCCACTGGGGCGTCAACAGTACGG 960
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TTGGGTCGGAGCACGTGTACGACTACCAGCGGTACCCGATGGAGATCCACCTGGTGTTCT 1020
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      ACAACGGGCTGTACGAGTCGTTCGCGGCGGCCCGCGAACAGGTCGACGGCATTGCGGTGG 1080
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TCGGGCTGTTCTACGAGATCTACGACCATTCGGTGGACGAGCAGCTGAACACCTGGACCC 1140
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GGTTCCTGCGCAACGTCGTCGAGCCGAACAGCCAGCACACGATCGAGTTCATCGACACGT 1200
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TCCCGCTGTACGAGGTGATCGGGGACGTCGAGTGGCCGTACTTTTCGTACGAGGGCAGCC 1260
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TGACGACACCGCCCTGCCTGGAGACGGTGACGTGGATCGTGGCGACCAAGCCGCTGCTCG 1320
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TGACGGAGAAGGAGATGAAGCAGTTCCGCCGGCTCCAGTCGCCGACCGGGCTGATGGTGA 1380
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      ACAACTATCGCCCCGTGCAGAAGCTAAACCATCGCCGGGTGTTCCTGTACTGAGGTGATG 1440
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GTGACGGTGGTGGTGATGCTGCAATTTGACTGAGAGCTGTGCATGAATGGGAACACACAC 1500
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      AGCCGCAGACCCCGCTAGCTCCTCCGTAGCGATGAATACCAAAGGAAAACTGTGCTAGAG 1560
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TTTAAGGACTTTTTCTTACCTGACATTTCGCCTCCTACTGCACACGCGAGCGCGCAGCGT 1620
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GTGCAGCGGGCAAAGTATTATACGTTAGTGAAATACATTATTTGTTTTTATCCAGTGCAG 1680
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CT 1682
consensus_9803#1      --