cluster # 9812

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Anopheles gambiae
cluster # 9812 cluster # 9812 Sequences # 21 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9812#0 length = 1066 sequences # 13
consensus_9812#1 length = 836 sequences # 3

consensus_9812#2 length = 486 sequences # 3
consensus_9812#3 length = 235 sequences # 1
consensus_9812#4 length = 138 sequences # 1

consensusID : consensus_9812#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1066
fasta sequence

                              [TTGCTCAGGAATATCATATGTTTAGGTGAGAGCGAAATCATACGCATTTTGCG-TGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC-GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT-CGGCGG-CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC-GGTGCCAGCTCGAGC-AGTAGCAATAGTAG-TAACAGCAATGGCAGCAGCAACG-GATCGTTT-CCAATT-CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT-CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGAT-CTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTT-TGTGTGGCGATTGGCGGATGTAAGCAAGCTTGGGTCCG-AAGACCACCAGATTAGC-CTTAAAGAGCAACAGAGAGAGAGCGAGTTTTGAAGCAAGAGATTCTAAATAAA]

[+] EMBL CNS08Y5X             [TTGCTCAGGAATATCATATGTTTAGGTGAGAGCGAAATCATACGCATTTTGCG TGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTTTTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGAT CTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTT TGTGTGGCGATTGGCGGATGTAAGCA                                                                                    ]
[+] EMBL BM628050             [ccGCTCAGGAATATCATATGTTTAGGTGAGAGCGAAATCATACGCATTTTGCG TGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAAC                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08X9B             [                 ATGTTTAGGTGAGAGCGAAATCATACGCATTTTGCG TGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGAGAGGAAGAACAGAATAAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCA ATACGGCGGACGCTGGTGGGCCCCACGATCATCAGCTGCTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08S8D             [                         GTGAGAGCGAAATCATACGCATTTTGCG TGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCAGGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACGAGATCGTTT CCAATT CCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS0945U             [                                CGAAATCATACGCATTTTGCGCTGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGAT CTGCTGATGAGTTTTTTGTAAGGTTGAATTGTGGGTTT TGTGTGGCGAT                                                                                                   ]
[+] EMBL BM588531             [                                           ccgTTTTGCG TGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTTCCCAATTCCCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08V4M             [                                                        TGCACAAAAAGGGT CACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCCAGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATAAAAAAAAAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTTAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTACTA                                                                                                                                                                            ]
[+] EMBL BM651317             [                                                      ccgGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGC AGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGT                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08VEF             [                                                                                                  TTGTTTGTTGCTTCAAAGAACCCCC GTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGAT CGGCGG CGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCC GGTGCCAGCTCGAGCAAGTAGCAATAGTAG TAACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAAAACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGAA CTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTT TGTGTGGCGATTGGCGGAT                                                                                           ]
[-] EMBL CNS0945V             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    gagGCCAGCTCGAGC AGTAGCAATAGTAG TTACAGCAATGGCAGCAGCAACG GATCGTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGAT CTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTT TGTGTGGCGATTGGCGGATGTAAGCAAGCTTGGGTCCG AAGACCACCAGATTAGC CTTAAAGAGCAACAGAGAGAGAGCGAGTTTTGAAGCAAGAGATTCTAAATAAA]
[-] EMBL CNS08S8E             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGC AGTAGCAATAGTAGTTATCAGCAATGGCAGCAGCAACG GATCTTTT CCAATT CCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGGGGAAAATCCACACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCTACTGCAGTGAATTCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGAT CTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTT TGTGTGGCGATTGGCGGATGTAAGCAAGCTTGGGTCCGCAAGACCACCAGATTAGCTCTTAAAGAGCAACAGAGAGAGAGCGAGTTTTGA                    ]
[-] EMBL CNS08SCO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCGGAGGAAAATCCAAACTACTTCACTAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAAATCCCACCAAAAGAAGGACCATCGTAGGGGTGTTTAATTGCTTAATGCGTTAACTACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGGGCGAGATGCTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTTGTGTGTGGCGATT                                                                                                  ]
[-] EMBL CNS08X9C             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CACCAAAAGAAGGACCATCGTAGGGGTGTTTAATT CTTAATGCGTTAACAACAGATTTTCATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATTTAACATTGATCGG                                                                                                                                                             ]




>consensus_9812#0
TTGCTCAGGAATATCATATGTTTAGGTGAGAGCGAAATCATACGCATTTTGCGTGTGCAC
AAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCC
CCGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTA
GTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATC
ATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCT
CGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTT
AACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCT
GGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCAC
AACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATG
GCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCG
TTTCCAATTCCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGC
GAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCACT
AAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCCC
ACCAAAAGAAGGACCATCGTAGGGGTGTTTAATTCTTAATGCGTTAACTACAGATTTTCA
TACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTATT
TAACATTGATCGGGCGAGATCTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTTTG
TGTGGCGATTGGCGGATGTAAGCAAGCTTGGGTCCGAAGACCACCAGATTAGCCTTAAAG
AGCAACAGAGAGAGAGCGAGTTTTGAAGCAAGAGATTCTAAATAAA

consensusID : consensus_9812#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 836
fasta sequence

                              [GGCAGAATCGGCACGTAGGCGAAATCATACGCATTTTGCGTGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCCGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAAT-CAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAATTCCGGCNCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGGCGATTTACTGTCCCGTTGCTGAGCGCGGAGGGAAAAATCCACACTACTTTCACTTAAAAATAAGGATCCCTGTACAGAGCCTTGTACCGTCAGCGGATTAACCCGACCTGCAGTGGAATTCCCAACCAAAAAGAAAGGACCATCCGTAAGGGTTGTTTANTCTTAATGCCGTTTAC]

[+] EMBL BX467886             [GGCAGAATCGGCACGTAGGCGAAATCATACGCATTTTGCGTGTGCACAAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCCGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGTTAGCATAAAT CAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAATTCCGGCNCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGGCGATTTACTGTCCCGTTGCTGAGCGCGGAGGGAAAAATCCACACTACTTTCACTTAAAAATAAGGATCCCTGTACAGAGCCTTGTACCGTCAGCGGATTAACCCGACCTGCAGTGGAATTCCCAACCAAAAAGAAAGGACCATCCGTAAGGGTTGTTTANTCTTAATGCCGTTTAC]
[+] EMBL CNS09GAB             [                                                                                      GTTTGTTGCTTCAAAGATTCCCCGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGGTGC ACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCAT CCTTTCGAGTTAGCATAAATCCAAGATGGCAGGG CCATCGACACTAGGAAACGTTCTCGCGAGGAga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08Y5Y             [                                                                                                                                                                                                                                          TCGAGTTAGCATAAAT CAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAAATCGGCGGCGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAA                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_9812#1
GGCAGAATCGGCACGTAGGCGAAATCATACGCATTTTGCGTGTGCACAAAAAGGGTCCAC
TTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCCCCGTGACGATAGC
CGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTAGTTAGAAAGGTGG
TGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATCATCCCTTTCGAGT
TAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAAC
AGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGA
ACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCTGGTGGGCCCCACG
ATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATC
ATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCGGTGCCAGCT
CGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAATTCCGG
CNCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGG
CGATTTACTGTCCCGTTGCTGAGCGCGGAGGGAAAAATCCACACTACTTTCACTTAAAAA
TAAGGATCCCTGTACAGAGCCTTGTACCGTCAGCGGATTAACCCGACCTGCAGTGGAATT
CCCAACCAAAAAGAAAGGACCATCCGTAAGGGTTGTTTANTCTTAATGCCGTTTAC

consensusID : consensus_9812#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 486
fasta sequence

                              [CCGCCCACGCGTCCGGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAAATCGGCGGCGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAATTCCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTTCACTAAAAATAAGATCCTGTACG]

[+] EMBL BM630267             [CCGCCCACGCGTCCGGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAATTCCGGCCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTTCACTAAAAATAAGATCCTGTACG]
[+] EMBL CNS08SCN             [                                                CGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAAATCGGCGGCGCTGGTGGGCCCCACGATCATCATCTGCTTGGGGCGGTCGGTTCGTGT                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08V4N             [                                                                                                                                                      GCAAATCGGCGGCGCTGGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCTTGTGGAATGAACATGCACAACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTTATGGGAG                                                                                                                                                                                                             ]




>consensus_9812#2
CCGCCCACGCGTCCGGGCAGGGCCCATCGACACTAGGAAACGTTCTCGCGAGGAAGAACA
GAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTTAACAACAACCAGAA
CAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAAATCGGCGGCGCTGGTGGGCCCCACGA
TCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCACAACAATCATCATCA
TCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATGGCCGGTGCCAGCTC
GAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAATTCCGGC
CAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGGCGAAATCCTGGGCGA
TTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTTCACTAAAAATAAGATCC
TGTACG

consensusID : consensus_9812#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 235
fasta sequence

                              [GGCCCCACGAACAACAGCAGCACGGGGCGGTCGGTACGTGTGGAAAGAACAAGCACAACAATCATCATCATCATCATCAACACCACCGGCAACCGCAACACCAGAAGGGAGTCATGGCCGGTGCCAGCACGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAAATCCGGCCAACAGAGAGAAGCAACAGTCCCGCGTCGACCAAAACAATAAACG]

[+] EMBL CNS08XX6             [GGCCCCACGAACAACAGCAGCACGGGGCGGTCGGTACGTGTGGAAAGAACAAGCACAACAATCATCATCATCATCATCAACACCACCGGCAACCGCAACACCAGAAGGGAGTCATGGCCGGTGCCAGCACGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTCCAAATCCGGCCAACAGAGAGAAGCAACAGTCCCGCGTCGACCAAAACAATAAACG]




>consensus_9812#3
GGCCCCACGAACAACAGCAGCACGGGGCGGTCGGTACGTGTGGAAAGAACAAGCACAACA
ATCATCATCATCATCATCAACACCACCGGCAACCGCAACACCAGAAGGGAGTCATGGCCG
GTGCCAGCACGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCGTTTC
CAAATCCGGCCAACAGAGAGAAGCAACAGTCCCGCGTCGACCAAAACAATAAACG

consensusID : consensus_9812#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 138
fasta sequence

                              [TTCTTGTCTACTTCCTGTTCTGTTTTGCGGCGGGCGTCGTACTGCCGGTGCTGTTCGGCGGCGCTGGTGGGCCCCACGTTCATCTGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGTACATGCACTACAATCATCATC]

[-] EMBL CNS08XX7             [TTCTTGTCTACTTCCTGTTCTGTTTTGCGGCGGGCGTCGTACTGCCGGTGCTGTTCGGCGGCGCTGGTGGGCCCCACGTTCATCTGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGTACATGCACTACAATCATCATC]




>consensus_9812#4
TTCTTGTCTACTTCCTGTTCTGTTTTGCGGCGGGCGTCGTACTGCCGGTGCTGTTCGGCG
GCGCTGGTGGGCCCCACGTTCATCTGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGTACA
TGCACTACAATCATCATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9812#1      -------------GGCAGAATCGGCACGTAGGCGAAATCATACGCATTTTGCGTGTGCAC 47
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      TTGCTCAGGAATATCATATGTTTAGGTGAGAGCGAAATCATACGCATTTTGCGTGTGCAC 60
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      AAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCC 107
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      AAAAAGGGTCCACTTGCAGAGGATAGTTATTATTCTCTTGTTTGTTGCTTCAAAGATTCC 120
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      CCGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTA 167
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      CCGTGACGATAGCCGTTTCAGTGGCCACTTTTTCTCGATAAAGAAGAAGCAACGAAACTA 180
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      GTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATC 227
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      GTTAGAAAGGTGGTGCAACGTAGATGAGACGGCAGCAGCAGCATCATCGTCATCATCATC 240
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      ATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCT 287
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      --------------CCGCCCACGCGTCCGGGCAGGGCCCATCGACACTAGGAAACGTTCT 46
consensus_9812#0      ATCCCTTTCGAGTTAGCATAAATCAAGATGGCAGGGCCCATCGACACTAGGAAACGTTCT 300
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      CGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTT 347
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      CGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTT 106
consensus_9812#0      CGCGAGGAAGAACAGAATGAATTTATGCCCCTGTCGAAACGCATCAACAATCTGCATCTT 360
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      AACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCT 407
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      AACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAAATCGGCGGCGCT 166
consensus_9812#0      AACAACAACCAGAACAGTATTGCGGCAGGCGTCGTACTGCCGGAGCAGATCGGCGGCGCT 420
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      GGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCAC 467
consensus_9812#3      ----GGCCCCACGAACAACAGCAGCACGGGGCGGTCGGTACGTGTGGAAAGAACAAGCAC 56
consensus_9812#2      GGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCAC 226
consensus_9812#0      GGTGGGCCCCACGATCATCAGCTGCTTGGGGCGGTCGGTTCGTGTGGAATGAACATGCAC 480
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      AACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATG 527
consensus_9812#3      AACAATCATCATCATCATCATCAACACCACCGGCAACCGCAACACCAGAAGGGAGTCATG 116
consensus_9812#2      AACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATG 286
consensus_9812#0      AACAATCATCATCATCATCATCATCACCACCTGCATCCGCAACACCTGATGGGAGTTATG 540
consensus_9812#4      -------------------------------TTCTTGTCTACTTCCTGTTCTGTTTTGCG 29
                                                       *      *   ** *    *  *   *

consensus_9812#1      GCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCG 587
consensus_9812#3      GCCGGTGCCAGCACGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCG 176
consensus_9812#2      GCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCG 346
consensus_9812#0      GCCGGTGCCAGCTCGAGCAGTAGCAATAGTAGTAACAGCAATGGCAGCAGCAACGGATCG 600
consensus_9812#4      GCGGGCGTC-GTACTGCCGGTGCTGTTCG-----GCGGCGCTGGTGGGCCCCACGT-TCA 82
                      ** ** * * *  *   * **     * *      * **  ***  *   * ***  ** 

consensus_9812#1      TTTCCAATTCCGGCNCAACAGTGGAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGG 647
consensus_9812#3      TTTCCAAATCCGGCCAACAGAGAGAAGCAACAGTCCCGCGTCGACCAAAACAATAAACG- 235
consensus_9812#2      TTTCCAATTCCGGCCAACAGTG-GAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGG 405
consensus_9812#0      TTTCCAATTCCGGCCAACAGTG-GAAGCAACAGTCCCGCGTCGACCATTTCAATTAACGG 659
consensus_9812#4      TCTGCTGCTTGGGGCGGTCGGTTCGTGTGGAA--TGTACATGCACTACAATCATCATC-- 138
                      * * *   *  **             *    *      * *  ** *     ** * *  

consensus_9812#1      CGAAATCCTGGGGCGATTTACTGTCCCGTTGCTGAGCGCGGAGGGAAAAATCCACACTAC 707
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      CGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTTCA 465
consensus_9812#0      CGAAATCCTGGGCGATTACTGTCCCGTGCTGAGCGCGGAGGAAAATCCACACTACTTCAC 719
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      TTTCACTTAAAAATAAGGATCCCTGTACAGAGCCTTGTACCGTCAGCGGATTAACCCGAC 767
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      CTAAAAATAAGATCCTGTACG--------------------------------------- 486
consensus_9812#0      TAAAAATAAGATCCTGTACGAGCTGTACGTCGAGCGGATGAGCCGACTGCAGTGAATTCC 779
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      CTGCAGTGGAATTCCCAACCAAAAAGAAAGGACCATCCGTAAGGGTTGTTTANTCTTAAT 827
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      CACCAAAAGAAGGACCATCGTAGGGGTGTTTAATTCTTAATGCGTTAACTACAGATTTTC 839
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      GCCGTTTAC--------------------------------------------------- 836
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      ATACTTTTTTTAAAAAATACTTTCTCGAACAAGCTTATTTCTGCTAATTATATTTAGTAT 899
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      ------------------------------------------------------------
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      TTAACATTGATCGGGCGAGATCTGCTGATGAGTTCTGTGTAAGGTTGAATTGTGGGTTTT 959
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      ------------------------------------------------------------
consensus_9812#3      ------------------------------------------------------------
consensus_9812#2      ------------------------------------------------------------
consensus_9812#0      GTGTGGCGATTGGCGGATGTAAGCAAGCTTGGGTCCGAAGACCACCAGATTAGCCTTAAA 1019
consensus_9812#4      ------------------------------------------------------------
                                                                                  

consensus_9812#1      -----------------------------------------------
consensus_9812#3      -----------------------------------------------
consensus_9812#2      -----------------------------------------------
consensus_9812#0      GAGCAACAGAGAGAGAGCGAGTTTTGAAGCAAGAGATTCTAAATAAA 1066
consensus_9812#4      -----------------------------------------------