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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9841#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1754 fasta sequence
[CCGAAATACGCAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCC-TTTTC-CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT-CTTATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC------ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGAGG-AAGGATAGTTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA-TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGAAGACGGGAACTGGTTTGGAGAGAATGCACGAGA--AGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA-TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC--AA--AC-ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG-CTGGTGTTAATGAAAC-GATGAATAAAGTTTTTTCGAACCCTCAAAAAAAAAAAAAATAGAAAAA]
[+] EMBL BM642742 [CCGAAATACGCAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCATTTTCTGGTCTGGTTCCGTGTGCTTTGGTTCGTTCCGTGCTGCCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACATTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTTGAAAATGACGC ]
[+] EMBL CNS08QMA [ cgAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCC AATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCAT CCGGGCTCGCCGATGAAAGACGA CAGGCGTTCGTGTT ]
[+] EMBL CNS08Z17 [ ACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATTAACATCCCGGA GGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAA ]
[+] EMBL BM621837 [ ccgATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCATTTTCTGGTCTGGTTCCGTGTGCTTTGGTTCGTTCCGTGCTGCCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCGGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCAATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGTGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCC ]
[+] EMBL AGA285008 [ AAATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGT ]
[+] EMBL AGA285816 [ AAATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCATGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGACGCGCCTGTAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTAC ]
[+] EMBL BX605888 [ GTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATTAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTA TCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAAT ]
[+] EMBL CNS08M7Y [ CAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAGTCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCAC ]
[+] EMBL BX604053 [ GAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAATGGAAGGTACTGCCG ]
[+] EMBL BM655111 [ ccGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACATTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTTGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGTCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTATCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGG ]
[+] EMBL CNS09C2T [ ACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGTCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTATCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGT GCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGAT ]
[+] EMBL BX628969 [ GACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGAGG AAGGATAGTTTGAC ]
[-] EMBL CNS08Z18 [ GGCCCGCCCGTACTGCCCCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGAGG AAGGATAGTTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTATTTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAATAGAAGACGGGAACTGGTTTGGAGAGAATGCACGAGA AGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAATTTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGAATAAAGTTTTTT ]
[-] EMBL CNS09C2U [ TGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGT GCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGATA GGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAAAGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGCGGAAAGGATAATTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAGAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGAAGACGGGAACTAGTTTGGAGAGAATGCAGAAGAG AGAGAAAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AAATACAATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGAAT AAGTATTT ]
[-] EMBL CNS08M7Z [ TGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGT GCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATATGCTTATTAGATA GGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAAAGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGCGGAAAGGATAATTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAGAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGAAGACGGGAACTAGTTTGGAGAGAATGCAGAAGAG AGAGAAAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTCCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AAATACAATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CT GT TTAATAAA ]
[+] EMBL BM632859 [ ccgCCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAACACACAAACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGCGGAAAGGATAATTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAGAATGGCTTGGAAAAATTAACTGTAGAAC AAAAAGAAAACGGGAACTGGTTTGGAGAGAATGTACGAGAAGAGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATACAAAA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTG ]
[-] EMBL AGA283720 [ TGCTGTGCTGTGTGGAGG AAGGATAGTTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAATAGAAGACGGGAACTGGTTTGGAGAGAATGCACGAGA AGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAATTTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGAATAAAGTTTTTTCGAACCCTCAAAAAAAA ]
[-] EMBL AGA284511 [ CACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGATCGTTGATTATATATTGCGTAGTTTCTAGGTACGAGTAGGAAAAAAATGGTGTGGAAAAATTAACTGTCGAACAAAATAGAAGACGGGAACTGCTTTGGAGAGAATGCACGCGA AGAGGGAGAGGACGATTTACGCGACAGTCGCATCCATGGTAGAGAGAAATATTTTAATTTGCTTTTCTGTCTTCCCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGATTAAAGTTTTTTCGAACACTCTAAACAGAAAAAAATAGAAAAA]
[-] EMBL CNS08QMB [ tTGG TTGGAAAAATTAACTGTAGAAC AAAAAGAAGACGGGAACTAGTTTGGAGAGAATGCAGAAGAG AGAGAAAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AAATACAATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAGCCTGGTGTTAATGAAACAGATGAATAAAGTTTTT ]
consensusID : consensus_9841#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence
[CCGCGGACGCGTGGGCGAGCCCAAATCCAAAATCTTCCCCGCTGTAGCTCCCTTTTCCGTCTGGTTCCGTGTGCTTTGATTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAATGCAGGTAGTAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGTGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAA]
[+] EMBL BM578888 [CCGCGGACGCGTGGGCGAGCCCAAATCCAAAATCTTCCCCGCTGTAGCTCCCTTTTCCGTCTGGTTCCGTGTGCTTTGATTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAATGCAGGTAGTAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGTGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAA]
consensusID : consensus_9841#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 566 fasta sequence
[GCAGAATCCCCGAGGATTTGACAAAACACGTCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCTGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGCTAGCCAGCGATGGGAAACGCAGGTAGCAATTTGCCAAGGGCAGCGTCATTAAATCCGGATCGAATTGATCCCATCCCGGGCTTCGCCGATGAAGGGACGACCAGCGCGTTCGTGTTTGGACCTGCAAGCCACACATCCACGGGTATCCTGTTCGCGACGGAGCTGAGTGAGGTGGAACCGTACTGGGTACTCCAAAGTTCCGTGCCCCAGATCCAGAGTTTTGCCCGTGAGCCGCGGCAAGGCGTTCCAGCACCACTGTCCGAGGGAACGACCCCATTCCGAGGGCNGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCNGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGG]
[+] EMBL AL694918 [GCAGAATCCCCGAGGATTTGACAAAACACGTCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCTGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGCTAGCCAGCGATGGGAAACGCAGGTAGCAATTTGCCAAGGGCAGCGTCATTAAATCCGGATCGAATTGATCCCATCCCGGGCTTCGCCGATGAAGGGACGACCAGCGCGTTCGTGTTTGGACCTGCAAGCCACACATCCACGGGTATCCTGTTCGCGACGGAGCTGAGTGAGGTGGAACCGTACTGGGTACTCCAAAGTTCCGTGCCCCAGATCCAGAGTTTTGCCCGTGAGCCGCGGCAAGGCGTTCCAGCACCACTGTCCGAGGGAACGACCCCATTCCGAGGGCNGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCNGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGG]
consensusID : consensus_9841#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[CGAGAATCGGCACGAGGGGCGATTGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTNGGGCGCGATATCTCATCAGATAGGGG]
[+] EMBL BX619730 [CGAGAATCGGCACGAGGGGCGATTGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTNGGGCGCGATATCTCATCAGATAGGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9841#0 CCGAAATACGCAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCC 60
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 AAATCCAAAATCTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCGTGTGCTTTGGTTC 120
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 ATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTT 180
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 GCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGA 240
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 CGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGA 300
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 GGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGA 360
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 GCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGG 420
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 TGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTC 480
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 CAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGG 540
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 CACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCAT 600
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 -------------------------------------GCAGAATCCCCGAGGATTTGACA 23
consensus_9841#0 CATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGG-CGAATGGAAGC 659
consensus_9841#3 ------------------------------CGAGAATCGGCACGAGGGGCGATTGGAAGC 30
consensus_9841#1 ---------------------------CCGCGGACGCGTGGGCGAGCCCAAATCCAAAAT 33
consensus_9841#2 AAACACGTCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAAT 83
* *** * **
consensus_9841#0 ACGATCCGAAGCTGAAAAATGTAGAAAATGACGCT--GGCACCACGAACAACCTCGTCAC 717
consensus_9841#3 ACGATCCGAAGCTGAAAAATGTAGAAAATGACGCT--GGCACCACGAACAACCTCGTCAC 88
consensus_9841#1 CTTCCCCGCTGTAGCTCCCTTTTCCGTCTGGTTCC-GTGTGCTTTGATTCATTCCGT-GC 91
consensus_9841#2 CTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCTGTGTGCTTTGGTTCATTCCGT-GC 142
*** * * * * ** * * * * * *** *
consensus_9841#0 CGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGG 777
consensus_9841#3 CGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGG 148
consensus_9841#1 TGTCCCCT--TTCGTGCGTGAG-TAGCC--AG-GATGGG-AAATGCAGGTAGTAATTTGC 144
consensus_9841#2 TGTCCCCT--TTCGTGCGTGAGCTAGCC--AGCGATGGG-AAACGCAGGTAGCAATTTGC 197
** * * * ** *** ** * ** * *** ** *** ** * *
consensus_9841#0 CAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGA 837
consensus_9841#3 CAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGA 208
consensus_9841#1 CAAGGG-AGCGTCAT-AAATCCGGATCGAAT-GATCCCATCCCGGGCT-CG--CCGATGA 198
consensus_9841#2 CAAGGGCAGCGTCATTAAATCCGGATCGAATTGATCCCATCCCGGGCTTCG--CCGATGA 255
***** * *** ** * * * * ** * * * * * **
consensus_9841#0 ATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCC 897
consensus_9841#3 ATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCC 268
consensus_9841#1 A--GG-ACGACCAG-GCATTCGTGTTTGA--CCGCAAGCCACACATC-CACGGGTATCC- 250
consensus_9841#2 A--GGGACGACCAGCGCGTTCGTGTTTGGACCTGCAAGCCACACATC-CACGGGTATCCT 312
* ** * ** * * ** * *** * ** * ** ** * *
consensus_9841#0 ACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTA 957
consensus_9841#3 ACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTA 328
consensus_9841#1 GTTCGCGACGGAG--GAG-GAGGTG---GAACCGTAC-GGGTACTCCAAG--TCCGTGCC 301
consensus_9841#2 GTTCGCGACGGAGCTGAGTGAGGTG---GAACCGTACTGGGTACTCCAAAGTTCCGTGCC 369
* ** ** ** * ** ** *** ** ** * * * **
consensus_9841#0 CGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGAC-GCATCGCTACCGGAAGA 1016
consensus_9841#3 CGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGAC-GCATCGCTACCGGAAGA 387
consensus_9841#1 C--GATCCAGAGTTT-GCCCGCGAGCCGCGG--AAGCGTTCCAGCACCA-TGTCCGAGGG 355
consensus_9841#2 CCAGATCCAGAGTTTTGCCCGTGAGCCGCGGCAAGGCGTTCCAGCACCACTGTCCGAGGG 429
* * ** * * * * * * *** * *** * * * ** *
consensus_9841#0 AAT-ACGTCACCACGCTG--CTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGT 1073
consensus_9841#3 AAT-ACGTCACCACGCTG--CTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGT 444
consensus_9841#1 AACGACCCCAT-CCGAGG--CGCCTGGAGGTGGAGCGGGTGGTGGTGGCGGTGGGCCGGA 412
consensus_9841#2 AACGACCCCATTCCGAGGGCNGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGA 489
** ** ** ** * * * * * * * ***** * *** *
consensus_9841#0 GTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGA 1133
consensus_9841#3 GTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTNGGGCGCGA 504
consensus_9841#1 TGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGA 472
consensus_9841#2 TGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCNGACCGTGTTCAAGTGGGA 549
* * * * ** ** *** ***** * * * * **
consensus_9841#0 TATCT-TATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGAT 1192
consensus_9841#3 TATCT-CATCAGATAGGGG----------------------------------------- 522
consensus_9841#1 CGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGAT 532
consensus_9841#2 CGGCGGTGGCAAGCAGG------------------------------------------- 566
* * ***
consensus_9841#0 TGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATC 1252
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 GGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTA 592
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 CGCTGGGGCCACAGAAACACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCT 1312
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 CAAGTTTCTGGTCGATGGCGAA-------------------------------------- 614
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 GGTTGGTTGGTTGCTGTGCTGTGTGGAGGAAGGATAGTTTGACCGCCGCGTGGAGGTCAC 1372
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 ACAGCTAAATGTATTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTA 1432
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 GTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGA 1492
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 AGACGGGAACTGGTTTGGAGAGAATGCACGAGAAGAGAGAGAGGACGATTTACGCGACAG 1552
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 TCGCAGCCATGGTAGAGAGAAATATTTTAATTGCTTTTCTGTTTTCGCCGTTTCCCAATC 1612
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 GATCGAAAACGACGACGACTGGCCGGTGGCGATACAAACATATTTTACGAATCTTTCGTG 1672
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 TAAATACGCTGGATAAAGCTGGTGTTAATGAAACGATGAATAAAGTTTTTTCGAACCCTC 1732
consensus_9841#3 ------------------------------------------------------------
consensus_9841#1 ------------------------------------------------------------
consensus_9841#2 ------------------------------------------------------------
consensus_9841#0 AAAAAAAAAAAAAATAGAAAAA 1754
consensus_9841#3 ----------------------
consensus_9841#1 ----------------------
consensus_9841#2 ----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||