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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9864#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 756 fasta sequence
[CAGAATCCCCGAGGTTTAACCGTTCAGTCGAACAGAAGT-ATTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATTATTTTTGTTGCAAATGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGATGTGGCAAGTATTGCCGGTTTGGACCTGGCATGATAATAAACTTCCTACAGACTATTTCGAAAACCGTATTCCAGATTTGTTGCCCGCACCCCGGCATTGAGCTGCCACGCAACACATGTGGTTTAACAAACAAAACACAGAAAAGCACGCAACTGCCATACTCAAAACGCTGTCACGTACAGCTCTTACCCCGAGCTTACGCGACACTCGACGAAACGCTAAATTCTTAGCTTATGACAGTTCACTTCACTCAAATTGGTACAATTTCCATCCTAACAAATTGTCAAACTCTCCACANNTANCACTTACACGCTCTCTTGCTAAACTGTTTGCANAATCCGCCTAAAATACACAGAAATAACCGAATTTTCTACACGAATTGTNCTGACACATATGTACACNTAAA]
[+] EMBL AL695075 [CAGAATCCCCGAGGTTTAACCGTTCAGTCGAACAGAAGT ATTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATTATTTTTGTTGCAAATGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGATGTGGCAAGTATTGCCGGTTTGGACCTGGCATGATAATAAACTTCCTACAGACTATTTCGAAAACCGTATTCCAGATTTGTTGCCCGCACCCCGGCATTGAGCTGCCACGCAACACATGTGGTTTAACAAACAAAACACAGAAAAGCACGCAACTGCCATACTCAAAACGCTGTCACGTACAGCTCTTACCCCGAGCTTACGCGACACTCGACGAAACGCTAAATTCTTAGCTTATGACAGTTCACTTCACTCAAATTGGTACAATTTCCATCCTAACAAATTGTCAAACTCTCCACANNTANCACTTACACGCTCTCTTGCTAAACTGTTTGCANAATCCGCCTAAAATACACAGAAATAACCGAATTTTCTACACGAATTGTNCTGACACATATGTACACNTAAA]
[+] EMBL BX625847 [ agACCGTTCAGTCGAACAGAAGTAATTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATTATTTTTGTTGCAAATGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGATGTGGC AGTATTG CGG TTGGACCTGGCATGATAAT AAC TCCTACAGACTA TTCG AAACCGTA TCCAGA TTGTTGCCCGCA CCCGGCATTGAG TG CA G AA A ATGTGGTTTAA AAACAAAACACAG AAAGCA G AA TGCCATACTCAAAA G TGTCACGTACAG TCTTACCCCGAG TTACGCGACACTCGA GAAACGCT AATTCTTAG TTATGACAGTTCA ]
consensusID : consensus_9864#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 705 fasta sequence
[CCGGCTTGGTGACTTCAGACCGTTCAGTCGAACAGAATCGTAAACTTTGCTAATTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCTGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGTTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTC-AAAATAAATTGCAGTTTTAGCATAATGTTTGAAATCGCTAAATACACAGAAATGACCGAAATTTTCTACACAAATTGTATGGCATAAGTAACAATAAACATTACATTATTAC]
[+] EMBL BM649532 [CCGGCTTGGTGACTTCAGACCGTTCAGTCGAACAGAATCGTAAACTTTGCTAATTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACCAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAGGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCAGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGCTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTCAAAAATAAATTGCAGTTTTAGCAT ]
[+] EMBL BX625578 [ ACTTTGCTAATTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCTGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGTTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTC AAAATAAATTGCAGTTTTAGCATAATGTTTGAAATCGCTAAATACACAGAAATGACCGAAATTTTCTACACAAATTGTATGGCATAAGTAACAATAAACATTACATTATTAC]
[+] EMBL BX623222 [ CTTTTCTNNTTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCTGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGTTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTC AAAATAAATTGC ]
consensusID : consensus_9864#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 622 fasta sequence
[CCGCTAGCATTGGCTCTATCACAACTCACCGAGAGCTTGGTGACTTCTCGTCGATCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGGATCAAATTATATATTATGGGGCCGTCAACAAACTTTAAAGTGCTAGTCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATATTGCTGGATGTGGAGTCATTGGGGTAGGACCTGGAATGGTTTTAACTAAGACAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATTACCGCAGAAGATTCAAATTAAAATCAAAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATCAAGTTAAAAAATACTAATCAGCTCGCATTTTATTCTCGGAACGACGCATAAACTAGAACAAAACAAATAATGCTGAATAAAAAAAAATCC]
[+] EMBL BM595266 [CCGCTAGCATTGGCTCTATCACAACTCACCGAGAGCTTGGTGACTTCTCGTCGATCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGGATCAAATTATATACTATGGGGCCGTCTACAAACTTTAAAGTGCTAGTCACATTAGTTTTGTTGCAAATTATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGC ]
[+] EMBL BM593848 [ CCG GAGCTTGGTGACTTCTCGTCGATCACTCGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAATACTTAGCTTTTAAAAACAGGATCAAATTATATATTATGGGGCCATCAATCAACTTTAAAGTGGTAGTCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGTCAAGTTCAAGAAGGGAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATATTGCTGGATGTGGAGTCATTGGGGTAGGACCTGGAATGGTTTTAACTAAAACAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATTACCGCAGAAGATTCAAATTGAAATCAAAACATAATGCTAAAACGTGTCATACATTTGATCATTTGATCAAGTTAAAAAATACTAATCAGCTCGCATTTTATTCTCGGAACGACGCATAA ]
[+] EMBL BM588869 [ ccgGACTTCTCGTCGTTTACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGAATCAAATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAAAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATCAAGTGAAAGATTGCTAATCAGCCCGCATTTTATTCTCGAAACAACGCATAAACTAGAACAAAACAAATAATGCTGAATAAAAAAAAATCC]
[+] EMBL BM655485 [ ccGGGGCCATCAATAAACTTTAAAGTGGTAGTCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGTCAAGTTCAAGAAGGGAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTGAATGAGGAACGACAGCGTCCCGGGAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATATTGCAGGATGTGGAGTCATTGGGGTAGGACCTGGAATGGTTTTAACTAAGACAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATTACCGCAGAAGATTCAAATTAAAATCAAAACATAGTGCTAAAACGTGTCATGAATTTGATCATTTGATCAAGTTAAAAAATACTAATCAGCTCGCATTTTATTCTCGGAACGACGCATAAACTAGAACAAAACAAATCATACTGAATAAAAAAAAtgc ]
[+] EMBL CNS08XG9 [ gTTGCTGGATGTGGAGTTATTGGGGTAGGACCTGGAATGGTTTTAACTAAGACAGACTATTCAAAACCGTATCCAGATTGCTGTCCCCAA ]
consensusID : consensus_9864#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 619 fasta sequence
[CCCAGGTTATCCTCGTTTACACNACGTTACAATAATTATTTTCAACATTCTTAAGCTAAAAACAGTTAGCTTTTAATAACAGCAATCAACATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAACATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAACAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATACAAGTGAAAGATTGCTAATCAGCCCGCA-TTTATTCTCGAAACAACGCATAAACTAAACAAAACAAATAATGCTGAATANACCACNCANAATCCAAAACATAAACANNACNCCANACACA]
[+] EMBL AL933373 [CCCAGGTTATCCTCGTTTACACNACGTTACAATAATTATTTTCAACATTCTTAAGCTAAAAACAGTTAGCTTTTAATAACAGCAATCAACATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAACATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAACAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATACAAGTGAAAGATTGCTAATCAGCCCGCA TTTATTCTCGAAACAACGCATAAACTAAACAAAACAAATAATGCTGAATANACCACNCANAATCCAAAACATAAACANNACNCCANACACA]
[+] EMBL BM649558 [ ccgGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAA ATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAA AACATAATGCTAAAACGTGTCATGAATTTGATCATTTGAT CAAGTGAAAGATTGCTAATCAGCCCGCATTTTATTCTCGAAACAACGCATAAACTAgaa ]
[-] EMBL CNS08XGA [ TCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGA ]
consensusID : consensus_9864#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 579 fasta sequence
[CCGCTAGTTCTAGATCGCGAGCTTGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAATAATAAAAAAATAAAACGATTTAATTCAAGTA]
[+] EMBL BM606344 [CCGCTAGTTCTAGATCGAGAGCTTGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCAT ]
[+] EMBL BM634705 [ ccgGCTTGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAATAAT ]
[+] EMBL BX621321 [ gcacgaggGGTGNGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACACTAAATCGTGAACCTGCTAATTTTATACGACATTTGTCCACACAATTAAGTTACACATGATGAAGACGTCAACCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTGCAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTCGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGATTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAATAATAAAAAAATAAAACGATTTAATTCAAGTA]
[+] EMBL BM600731 [ ccgGGTGAGTTCAGACCGATCAATCGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGCTACACATGATGAAGTCGTCAACCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTCGTAACACAAAAAGTCAAGTTCAAGAAAATAGCTGCTACGATGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGATTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGGCATGATTTTGATAATTTGATATGAAAAGATTCCATAA ]
[+] EMBL BM592712 [ ccGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAACCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTT ]
[+] EMBL BM647512 [ TAATTTTATACGACATTTGTCCACACAATCGAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTATCCACATTACTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTACTAACACGAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAGAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAAT ]
consensusID : consensus_9864#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence
[AGCAGAATCCGCACGANTGAGCTTGGTGACTTCTCGTCGTTCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGAATCAAATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACGTACAGAATAAGATGTTCCTGGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATGATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAAATGGTTTTAACTAAAATAGACTATTCTAAACCGTATCCAGGATTGGCTGTCCCCAAAGGTGAACACTGAAACGCAGAAGATTTCCAAGTTNNACGAGTCCGANAGCCGTTNACGTGGCGTCGAAACG]
[+] EMBL BX468883 [AGCAGAATCCGCACGANTGAGCTTGGTGACTTCTCGTCGTTCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGAATCAAATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACGTACAGAATAAGATGTTCCTGGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATGATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAAATGGTTTTAACTAAAATAGACTATTCTAAACCGTATCCAGGATTGGCTGTCCCCAAAGGTGAACACTGAAACGCAGAAGATTTCCAAGTTNNACGAGTCCGANAGCCGTTNACGTGGCGTCGAAACG]
consensusID : consensus_9864#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence
[GAATCGCCACGAGGTNCGTAGTGCTTGGTGACTTCAGGACCGCNTCAGGTCGAACAGAAGTAATNTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATATATTTTTGTTGCAAAGTGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGGATGTGGCAGTATTGCGGTTGGACCTGGCATGATAATAACGTCCTACAGACTATTGCGAAACCGTATCCAGATGGTTGACCCGCGACCACGGCCATTGAGTGCAGGAAAAGTGTGGTTTAAAAACANAAACACAG]
[+] EMBL BX468970 [GAATCGCCACGAGGTNCGTAGTGCTTGGTGACTTCAGGACCGCNTCAGGTCGAACAGAAGTAATNTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATATATTTTTGTTGCAAAGTGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGGATGTGGCAGTATTGCGGTTGGACCTGGCATGATAATAACGTCCTACAGACTATTGCGAAACCGTATCCAGATGGTTGACCCGCGACCACGGCCATTGAGTGCAGGAAAAGTGTGGTTTAAAAACANAAACACAG]
consensusID : consensus_9864#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 94 fasta sequence
[CCGCCCGCGCGTCCGGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAGCACTAGATCGTGAACCTGCTAATTTTATACGACATTTG]
[+] EMBL BM587259 [CCGCCCGCGCGTCCGGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAGCACTAGATCGTGAACCTGCTAATTTTATACGACATTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9864#0 -------------------------------CAGAATCCCCGAGGTTTA-ACCGTTC--A 26
consensus_9864#1 -------------------------------CCGGCTTGGTGACTTCAG-ACCGTTC--A 26
consensus_9864#6 ------------GAATCGCCACGAGGTNCGTAGTGCTTGGTGACTTCAGGACCGCNTCAG 48
consensus_9864#4 -------------CCGCTAGTTCTAGATCGCGAGCTTGG-TGAGTTCAG-ACCGATC--A 43
consensus_9864#7 -----------------------CCGCCCGCGCGTCCGGGTGAGTTCAG-ACCGATC--A 34
consensus_9864#2 CCGCTAGCATTGGCTCTATCACAACTCACCGAGAGCTTGGTGACTTCTC-GTCGATC-AC 58
consensus_9864#3 --------------------------------------CCCAGGTTATC-CTCGTTT-AC 20
consensus_9864#5 --------------AGCAGAATCCGCACGANTGAGCTTGGTGACTTCTC-GTCGTTC-AC 44
* **
consensus_9864#0 GTCGAACAGAAGTA--TTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATT 84
consensus_9864#1 GTCGAACAGAA-------------------TCGTAAACTTTGCTAATTTTATACGACATT 67
consensus_9864#6 GTCGAACAGAAGTAATNTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATT 108
consensus_9864#4 ATTGAGTTGAAATAA-GTTCCAACATTAAATCGTAAACCT-GCTAATTTTATACGACATT 101
consensus_9864#7 ATTGAGTTGAAATAA-GTTCCAGCACTAGATCGTGAACCT-GCTAATTTTATACGACATT 92
consensus_9864#2 ACGA-GTTAAAATAAGTTATTTTCAAA---TTTTAA-----GCTAAAAACAGTTAGCTTT 109
consensus_9864#3 ACNACGTTACAATAA-TTATTTTCAACAT-TCTTAA-----GCTAAAAACAGTTAGCTTT 73
consensus_9864#5 ACGA-GTTAAAATAAGTTATTTTCAAA---TTTTAA-----GCTAAAAACAGTTAGCTTT 95
* * * * ***** * * **
consensus_9864#0 CGTCCTCAC-AATTAA-GTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCC 142
consensus_9864#1 CGTCCACAC-AATTAA-GTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCC 125
consensus_9864#6 CGTCCTCAC-AATTAA-GTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCC 166
consensus_9864#4 TGTCCACAC-AATCAA-GTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCC 159
consensus_9864#7 TG---------------------------------------------------------- 94
consensus_9864#2 TAATAACAG-GATCAA-ATTATATATTATGGGGCCGTCAACAAACTTTAAAGTGCTAGTC 167
consensus_9864#3 TAATAACAGCAATCAACATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATC 133
consensus_9864#5 TAATAACAG-AATCAA-ATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATC 153
consensus_9864#0 ACAT-TATTTTTGTTGCAAA-TGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACA 200
consensus_9864#1 ACAT-TATTTTTGTTGCAAA-TGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACA 183
consensus_9864#6 ACATATATTTTTGTTGCAAAGTGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACA 226
consensus_9864#4 ACAT-TAGTTTTGTTACAAA-TGATCTATTTAGTATCGTTTTCACATGCATATACATTCC 217
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 ACAT-TAGTTTTGTTGCAA-ATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACA 225
consensus_9864#3 ACAT-TAGTTTTGTTGCAACATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACA 192
consensus_9864#5 ACAT-TAGTTTTGTTGCAA-ATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACA 211
consensus_9864#0 TCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGC-TAAA- 258
consensus_9864#1 TCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGC-TAAA- 241
consensus_9864#6 TCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGC-TAAA- 284
consensus_9864#4 TGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGC-TACA- 275
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 TGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCAC-TACA- 283
consensus_9864#3 TGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCAC-TACA- 250
consensus_9864#5 TGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACGTACAG 271
consensus_9864#0 AATAA-ATGTTCCTG-TAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGC 316
consensus_9864#1 AATAA-ATGTTCCTG-TAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGC 299
consensus_9864#6 AATAA-ATGTTCCTG-TAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGC 342
consensus_9864#4 AATAA-ATGTTCCTG-TAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGG 333
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 AATAA-ATGTTCCTG-TAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGC 341
consensus_9864#3 AATAA-ATGTTCCTG-TAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGC 308
consensus_9864#5 AATAAGATGTTCCTGGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGC 331
consensus_9864#0 TGCAGTGACGATTATTCGCTTCATGTTGCTGG-ATGTGGCAAGTATTGCCGGTTTGGACC 375
consensus_9864#1 TGCAGTGATGATTATTCACTTCATGTTGCTGG-ATGTGGCA-GTATTGCGG--TTGGGCC 355
consensus_9864#6 TGCAGTGACGATTATTCGCTTCATGTTGCTGGGATGTGGCA-GTATTGCGG--TTGGACC 399
consensus_9864#4 TGCAGTGATGATTATTCACTTCATGGTATTGG-ATGTGGTTTTTTTGCGGTTGGGCCTGG 392
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 TGCAGTGATGATTATTCACTTCATATTGCTGG-ATGTGGAG-TCATTGGGG--TAGGACC 397
consensus_9864#3 TGCAGTGATGATTATTCACTTCATGTTGCTGG-ATGTGGAG-TTATTGGGG--TTGGACC 364
consensus_9864#5 TGCAGTGATGATGATTCACTTCATGTTGCTGG-ATGTGGAG-TTATTGGGG--TTGGACC 387
consensus_9864#0 TGGCA-TGATAATAAACTTCCTACAGACTATTTCGAAAACCGTATTCCAGATTTGTTG-C 433
consensus_9864#1 TGGAA-TGATAATAA--CTCCTACAGACTATTC--AAAACCGTATCCTGA--TTGTTG-C 407
consensus_9864#6 TGGCA-TGATAATAA-CGTCCTACAGACTATTGC-GAAACCGTATCCAGA--TGGTTGAC 454
consensus_9864#4 CATGG-TGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGA 451
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 TGGAA-TGGTTTTAA--CTAAGACAGACTATTCT--AAACCGTATCCAGATT--GCTGTC 450
consensus_9864#3 TGGAA-TGGTTTTAA--CTAAGATAGACTATTCT--AAACCGTATCCAGATT--GCTGTC 417
consensus_9864#5 TGGAAATGGTTTTAA--CTAAAATAGACTATTCT--AAACCGTATCCAGGATTGGCTGTC 443
consensus_9864#0 CCGCACCCC--GGCATTGAGCTGCCACGCAACACATGTGGTTTAACAAACAAAACACAGA 491
consensus_9864#1 CCGCACCC---GGCATTGAGT------GCAGAAAATGTGGTTTAA-AAACAAAACACAGA 457
consensus_9864#6 CCGCGACCACGGCCATTGAGT----GCAGGAAAAGTGTGGTTTAAAAACANAAACACAG- 509
consensus_9864#4 TAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGAC 511
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 CCCAA--GTGAAAATT--ACC----GCAGAAGATT--CAAATTAAAATCAA-AACATAAT 499
consensus_9864#3 CCCAA--GTGAAAATG--AAC----GCAGAAGATT--CAAATTAAAATCAACAACATAAT 467
consensus_9864#5 CCCAAAGGTGAACACTGAAAC----GCAGAAGATTTCCAAGTTNNA--CGAGTCCGANAG 497
consensus_9864#0 AAAGCACGCAACTGCCATACTCAAAACGCTGT-CACGTACAGCTCTTACCCCGAGCTTAC 550
consensus_9864#1 AAA-CA---GAATACCATACTCAAAA--GTGT-CACGTATAGTTTTAGTACAGAG-TTAC 509
consensus_9864#6 ------------------------------------------------------------
consensus_9864#4 ATGATTTTGATAATTTGATATGAAATGATTCC-ATAATAATAAAAAAATAAAACGATTTA 570
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 GCTAAAACGTGTCATGAATTTGATCATTTGAT-CAAGTTAAAAAATACTAATCAGCTCGC 558
consensus_9864#3 GCTAAAACGTGTCATGAATTTGATCATTTGATACAAGTGAAAGATTGCTAATCAGCCCGC 527
consensus_9864#5 CCGTTNACGTGGCGTCGAAACG-------------------------------------- 519
consensus_9864#0 GCGACACTCGACGAAACGCTAAATTCTTAGCTTATGACAGTTCACTTCACTCAAATTGGT 610
consensus_9864#1 GCGACACTAGA-GTTACGCTAA-TTCTTAGTTT-TGACAGTTCATTTA--TCAAATTGGT 564
consensus_9864#6 ------------------------------------------------------------
consensus_9864#4 ATTCAAGTA--------------------------------------------------- 579
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 ATTTTATTCTCGGAACGACGCATAAACTAGAACAAAACAAATAATGCTGAATAAA----A 614
consensus_9864#3 ATTT-ATTCTCGAAACAACGCATAAACTA-AACAAAACAAATAATGCTGAATANACCACN 585
consensus_9864#5 ------------------------------------------------------------
consensus_9864#0 ACAATTTCCATCCTAACAAATTGTCAAACTCTCCACANNTANCACTTACACGCTCTCTTG 670
consensus_9864#1 ACAATTTAAATCTAAACAAA--GCCAATTTCAAAATAAATTGCAGTT----------TTA 612
consensus_9864#6 ------------------------------------------------------------
consensus_9864#4 ------------------------------------------------------------
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 AAAAATCC---------------------------------------------------- 622
consensus_9864#3 CANAATCCAAAACATAAACANNACNCCANACACA-------------------------- 619
consensus_9864#5 ------------------------------------------------------------
consensus_9864#0 CTAAACTGTTTGCANAATCCGCCTAAAATACACAGAAATAACCGAA-TTTTCTACACGAA 729
consensus_9864#1 GCATAATGTTTGAAA---TCGCT--AAATACACAGAAATGACCGAAATTTTCTACACAAA 667
consensus_9864#6 ------------------------------------------------------------
consensus_9864#4 ------------------------------------------------------------
consensus_9864#7 ------------------------------------------------------------
consensus_9864#2 ------------------------------------------------------------
consensus_9864#3 ------------------------------------------------------------
consensus_9864#5 ------------------------------------------------------------
consensus_9864#0 TTGTNCTGACACATATGTACACNTAAA-------------- 756
consensus_9864#1 TTGTATGG---CATAAGTAACAATAAACATTACATTATTAC 705
consensus_9864#6 -----------------------------------------
consensus_9864#4 -----------------------------------------
consensus_9864#7 -----------------------------------------
consensus_9864#2 -----------------------------------------
consensus_9864#3 -----------------------------------------
consensus_9864#5 -----------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||