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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9871#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1231 fasta sequence
[CCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAG-AAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA-CCGGTGCTGCG-AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG-CTGCAAC-ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG-CCGTG-CCGGTGCATGAAATCTTTCGA-CCAGTTCTTGT-CCGCCTCGA-TCTGTGCACCGCGTCG-CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC-GGCCAGCGGGTCCTCCGG-CCCGACCGCTACCAG-ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGGGTCCGCCCACGCGTCCGCGGACGCGTGGGCGG]
[+] EMBL CNS08F7V [CCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAGCAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA CCGGTGCTGCG AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTCCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAA ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCAC ]
[+] EMBL CNS08HKW [ CTGCTCACTGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAG AAATGTGCATCGAACAAACGAAAAAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCCGGTGCTGCGCAACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGG ]
[+] EMBL CNS08T0F [ AAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAA AAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA CCGGTGCTGCG AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTTATAACGCAGCCCTTGGTGGATTTTTCTGGGTAGCCCTTGCTGGCCATCACTAAACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTTTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTTTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTAAAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTCCC ]
[+] EMBL CNS090AB [ AAAG AAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA CCGGTGCTGCG AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTTTGATAACGCAGCCCTTGGGGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCA ]
[-] EMBL CNS08F7U [ CCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ]
[-] EMBL CNS090AA [ CCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ]
[-] EMBL CNS08T0E [ AGATCGGTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATG TTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGTTTTTT TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ]
[-] EMBL CNS08X6S [ GACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG TTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACGGCGGGCCATCTTCCAGCAGATGGTTTTTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ]
[+] EMBL CNS08X6T [ ACCGTTGTTCTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTTCCGGGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTTT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTC ]
[-] EMBL BM613681 [ ctagcCCGCTCGCCTTCCACGACCAGTGCCGCGTACGGTGCGCTGCGGATGAACGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CTGCCTCGA TCTGTGCACCACGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCACTCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTTGTTCTCTGGCCAATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGG ]
[-] EMBL BX628840 [ CACC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGG ]
[-] EMBL CNS08HKV [ CAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAATTCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGTTCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ]
[-] EMBL BM595161 [ GCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGCCCACGCGTCCGCCCACGCGTCCGCGG ]
[-] EMBL BM575266 [ GCGGATGAATGTTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCAA TCTGTGCACCGCGCCG CCCGGGGCCGAAGCATTTGATGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG GCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACATCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACAACTGATTCTAGCACTGAATCGATGTCGAATTTGTACTACACCAAGGCCTACTTCGTTCGTTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTcgg ]
[-] EMBL BM602776 [ CTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGG ]
[-] EMBL BM590694 [ TCGGTGAAGCTGGCGTACCGGGCCGTCGGTATGCCCGTG CCGGTGCATGAAATCTTTCGACCCAGTTCTTGT CCGCCTCGATTCTGTGCACCGCGTCGCCCCCGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATCGGGCCAGCGGGTCCTCCGGCCCCGACCGCTACCAGAATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGG ]
[-] EMBL CNS08LNG [ TGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGT CTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ]
[-] EMBL BM631476 [ TG CCGTGCCCGGTGCATGAAATCTTTCGA CCAGTTCTTGTCCCGCCTCAA TCTGTGCACCGCGCCG CCCGGGGCCGAAGCATTTAATGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG GCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCACTCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTTGTTCTCTGGCCAATCTTGGCGATCCGTGTTAGCTGATCGACGcgg ]
[-] EMBL BM607578 [ CACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTG ]
[-] EMBL BM594776 [ AGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCACTCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTTGTTCTCTGGCCAATCTTGGCGATCCGTGTTAGCTGATCGACGGATT GAG CCG GACGCGTGGGCGGACGCGTGGGCGG]
[-] EMBL AL694790 [ ACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACAACTGATTCTAGCACTGAATCGATGTCGAATTTGTACTACACC AGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCtaaacctc ]
consensusID : consensus_9871#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[TTTTTTGAGCTTTAACGCCCCCCCCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAACCGTCGAAGCTGATCGCGGTGCTGCAGGCGGACGTAGCGTGCGCCGCAGCCTGCTTCAGGTCGCTGTGCAGCACGACGGTGATCAGCACCCGGCCACCGTTCGTCACGAACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGACATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACCTCCCGCACGACCAGATCCAGCTG]
[+] EMBL CNS08LNH [TTTTTTGAGCTTTAACGCCCCCCCCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAACCGTCGAAGCTGATCGCGGTGCTGCAGGCGGACGTAGCGTGCGCCGCAGCCTGCTTCAGGTCGCTGTGCAGCACGACGGTGATCAGCACCCGGCCACCGTTCGTCACGAACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGACATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACCTCCCGCACGACCAGATCCAGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9871#0 -----------------------CCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTC 37
consensus_9871#1 TTTTTTGAGCTTTAACGCCCCCCCCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTC 60
*************************************
consensus_9871#0 CGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATG 97
consensus_9871#1 CGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATG 120
************************************************************
consensus_9871#0 CTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAAC----------- 146
consensus_9871#1 CTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAACCGTCGAAGCTG 180
*************************************************
consensus_9871#0 ------------------------------------------------------------
consensus_9871#1 ATCGCGGTGCTGCAGGCGGACGTAGCGTGCGCCGCAGCCTGCTTCAGGTCGCTGTGCAGC 240
consensus_9871#0 ---------------------------------------TCTCCGCGCTCGTTCCGGGCC 167
consensus_9871#1 ACGACGGTGATCAGCACCCGGCCACCGTTCGTCACGAACTCTCCGCGCTCGTTCCGGGCC 300
*********************
consensus_9871#0 ACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATA 227
consensus_9871#1 ACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATA 360
************************************************************
consensus_9871#0 ACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCG 287
consensus_9871#1 ACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCG 420
************************************************************
consensus_9871#0 CTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCC 347
consensus_9871#1 CTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCC 480
************************************************************
consensus_9871#0 ATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCG 407
consensus_9871#1 ATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCG 540
************************************************************
consensus_9871#0 AACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTAC 467
consensus_9871#1 AACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGA-CATCATGCCAGCGTAC 599
******************************************* ****************
consensus_9871#0 AAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACC 527
consensus_9871#1 AAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACC 659
************************************************************
consensus_9871#0 AGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTG 587
consensus_9871#1 ----TCCCGCACGACCAGATCCAGCTG--------------------------------- 682
* ** *** * * * * **
consensus_9871#0 GCGTACCGGGCCGTCGGTATGCCGTGCCGGTGCATGAAATCTTTCGACCAGTTCTTGTCC 647
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 GCCTCGATCTGTGCACCGCGTCGCCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGC 707
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 GCGTCGGCCAGCCCATCGGCCAGCGGGTCCTCCGGCCCGACCGCTACCAGATCGATCTGG 767
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 TTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGC 827
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 TGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACC 887
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 CGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACC 947
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 AGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCC 1007
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 AACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACC 1067
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 AAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTA 1127
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 CTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGAT 1187
consensus_9871#1 ------------------------------------------------------------
consensus_9871#0 CGACGGATTCGGGTCCGCCCACGCGTCCGCGGACGCGTGGGCGG 1231
consensus_9871#1 --------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||