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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9896#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1945 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGCCGAAGCCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA-GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT-GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGCGGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAA-TTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACTGAATCTGACCGGGCAGAAACAGCCCAGTGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGT]
[+] EMBL BM576741 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCCGAAGCCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATA ]
[+] EMBL BM623485 [ ccgGCCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTGGCTATTATTATCCCAGGGCGCACCAACTATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAATCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATCGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGGTTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCTGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTCATACTGGCCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGC ]
[+] EMBL BM607658 [ ccgCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCGGAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAAGAGAGCCTG ]
[+] EMBL BX601787 [ GACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACACCGACCTCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGg ]
[+] EMBL BM640818 [ ccgCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTACTCCAACGCCCCGGTCTCCTCCCAGCCAGCTTCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCTGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAAGGGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGGCTGGCCCAATCGTCCGTATCGTTTGAGGAGATACAGCTGCTCCAGAAGCTTAGCATGGGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATG ]
[+] EMBL BM622414 [ ccgCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGAT ]
[+] EMBL BM635524 [ ccgGTTGCGAGAGGGGACGGAAACTAGTGGCTATTATTATCCCAGGGCGCACCAACTATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAATCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATCGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGGTTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCTGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTCATACTGGCCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAAGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCA ]
[+] EMBL AGA285699 [ TCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAACAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGA ]
[+] EMBL BX608467 [ ACCATCACCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGCGGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGT ]
[+] EMBL BM645836 [ ccgGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTCATACTGGCCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGCCGGCTGTCGGGTGAGCTAGCGGCGGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAGATTGGCCGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTCGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTT ]
[-] EMBL AGA284393 [ ACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCG ]
[+] EMBL BX605293 [ CGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGCGGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAATTTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCA ]
[+] EMBL AGA280797 [ ACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATG ]
[+] EMBL AGA280500 [ ACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGC ]
[+] EMBL BX617166 [ TGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAA TTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGTCCGGTGAAAAGAGCCGCATTTTGGGCGA ]
[+] EMBL BX608730 [ ATGCGTAAAGTATATGTCGATGAGATCAA TTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACTGAATCTGACCGGGCAGAAACAGCCCAGTGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGT]
[+] EMBL BM577951 [ ccgGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACTGAATCGGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTGCAGCAGGCTACATCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTCAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCGCACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAA ]
consensusID : consensus_9896#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 715 fasta sequence
[CAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTTTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGAGGAAGAGCAGCCGCAAACTGTTAT]
[+] EMBL BX612858 [CAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTTTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGG ]
[+] EMBL BX614321 [ AGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGACGAGGCCCAGCAGCAGTCCGATGACAGCAAGGCGCGGGACG ]
[-] EMBL AGA282421 [ CCCAGCGGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCATCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATT ]
[+] EMBL BM583445 [ ccggGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATTTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGGCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCGGACCGAGCAGAAACAGCCCAGCGGGCAGCAAAAATGGTACAGCAAGCTACATCAAGCCAGGAAGCCGCCGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTCAGTCTGCTGCGCTGTCCACTCTGTCTGAAGGGCTACAAGGATTTCAGCTCACTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGAGGAAGAGCAGCCGCAAACTGTTAT]
[-] EMBL AGA282203 [ CGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGTGATTGAGTAGGATTTGTGGAAGAACCACACCTGTATTACCCGgg ]
consensusID : consensus_9896#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence
[AGCAGATACCCACACTCGAAAGAAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACGTTAGTCTTAAGAGCGATGGGTGGGGGAGATGTGTAATGTAATTTAATCTTGGTATGTTTTTGTCCCATTTTACAGTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGTCATGAATTATA]
[-] EMBL BM591453 [AGCAGATACCCACACTCGAAAGAAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACGTTAGTCTTAAGAGCGATGGGTGGGGGAGATGTGTAATGTAATTTAATCTTGGTATGTTTTTGTCCCATTTTACAGTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGTCATGAATTATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9896#0 CCGCCCACGCGTCCGCCCACGCGTCCGCGCCGAAGCCGACTCTACGTCGTTCGCTTGCAG 60
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 TGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCA 120
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTC 180
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGT 240
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCC 300
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCC 360
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCA 420
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 TGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGA 480
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 ATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCA 540
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 ATCGATCGAGAACAAGGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCC 600
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGC 660
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCATGGAGCACAG 720
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCAT 780
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 ACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCA 840
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGC 900
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCT 960
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTA 1020
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTC 1080
consensus_9896#1 ------------------------------------------------------------
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAA 1140
consensus_9896#1 ------------------------------------------------------CAACAA 6
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCT 1200
consensus_9896#1 GCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCT 66
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATAT 1260
consensus_9896#1 GAAGCAAATCGAGCGACGCTTTTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATAT 126
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 GCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACA 1320
consensus_9896#1 GCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACA 186
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 AGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGA 1380
consensus_9896#1 AGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGA 246
consensus_9896#2 ------------------------------------------------------------
consensus_9896#0 CGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAG--AAAGGGTACAGATG 1438
consensus_9896#1 CGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAG--AAAGGGTACAGATG 304
consensus_9896#2 -----------------------AGCAGATACCCACACTCGAAAGAAAAGGGTACAGATG 37
******** *********** **************
consensus_9896#0 CTTACCGTGCAGTCGGACATCTTCCAGAA-GGATTTCGAAGCCGAACGTACGGCGCGCGA 1497
consensus_9896#1 CTTACCGTGCAGTCGGACATCTTCCAGAA-GGATTTCGAAGCCGAACGTACGGCGCGCGA 363
consensus_9896#2 CTTACCGTGCAGTCGGACATCTTCCAGAAAGGATTTCGAAGCCGAACGTACGGCGCGCGA 97
***************************** ******************************
consensus_9896#0 AGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAA 1557
consensus_9896#1 AGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAA 423
consensus_9896#2 AGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAA 157
************************************************************
consensus_9896#0 TGCCGAACTTACTGCGCAAGTTTCCCAAAC------------------------------ 1587
consensus_9896#1 TGCCGAACTTACTGC--------------------------------------------- 438
consensus_9896#2 TGCCGAACTTACTGCGCAAGTTTCCCAAACGTTAGTCTTAAGAGCGATGGGTGGGGGAGA 217
***************
consensus_9896#0 ----------------------------------------------TGAATCTGACCGGG 1601
consensus_9896#1 ----------------------------------------------TGAATCTGACCGGG 452
consensus_9896#2 TGTGTAATGTAATTTAATCTTGGTATGTTTTTGTCCCATTTTACAGTGAATCTGACCGGG 277
**************
consensus_9896#0 CAGAAACAGCCCAGTGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTG 1661
consensus_9896#1 CAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTG 512
consensus_9896#2 CAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTG 337
************** *********************************************
consensus_9896#0 CAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTC 1721
consensus_9896#1 CAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTC 572
consensus_9896#2 CAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTC 397
************************************************************
consensus_9896#0 TGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACG 1781
consensus_9896#1 TGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACG 632
consensus_9896#2 TGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACG 457
************************************************************
consensus_9896#0 CTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGG 1841
consensus_9896#1 CTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGAG 692
consensus_9896#2 CTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGG 517
********************************************************** *
consensus_9896#0 GTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATC 1901
consensus_9896#1 GAAGAGCAGCCGCAAACTGTTAT------------------------------------- 715
consensus_9896#2 GTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATC 577
* ********** **********
consensus_9896#0 TTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGT----------- 1945
consensus_9896#1 -------------------------------------------------------
consensus_9896#2 TTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGTCATGAATTATA 632
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||