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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1032 fasta sequence
[CCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT-CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC-GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA-G--AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC-GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC-CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA-CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT-GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG-ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG-TC-CCTGTGGCGAAGTGAAGGGTTAAT-AAAAAAAGCAGGTGATGCGAATTGTAAAAA]
[+] EMBL CNS09CJF [CCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTTCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAA ]
[+] EMBL CNS09OFM [ CGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAGGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCAGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TCGCCTGTGG ]
[+] EMBL CNS08OXF [ cCTTTCCGCGCGTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GAGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCA GTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATTATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGATAAATt ]
[+] EMBL CNS094D7 [ CGCGTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCTCCGCAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA GGAAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATC ]
[+] EMBL CNS093TH [ GTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCA GTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGT ]
[+] EMBL CNS09RBH [ cacatgGCAGG GT CGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGCGGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCA GTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATAGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAA ]
[-] EMBL CNS09RBI [ AAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTAACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTAACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGAAACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGTGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TG CCTGTGGCGAAGTGAA GGTTAAT AAAAAccctgctt ]
[-] EMBL CNS09OFN [ AAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CGGAGGAGGTAACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTAACAGAGGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGAAACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCAGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGTTGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTGCTC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCA ]
[+] EMBL BX621577 [ ACGTCGGTGGCCTCT CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGNCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGG AAAAACTGACTGGCTCGACGGAAAACATGTCGTGGTTTGGCAACG ]
[-] EMBL CNS09CJG [ GCCGATCGACTACGAGTAACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACAATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGAAACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTTCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTTACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTGATGCG ]
[-] EMBL CNS08OXG [ AAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TCGCCTGTGGCGAAGTGAAGGGTTAATAAAAAAAAGCAGG GGTGC ]
[-] EMBL CNS094D8 [ CCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTTTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCAT ]
[-] EMBL CNS09MZS [ GAAGCGAAACCCGCAGGTGTTCTTCGAAATAAGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGGGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTG ]
[-] EMBL CNS09HLV [ AGGTGTTCTTCGACATACGGATAGGGGACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTGATGCGAATTGTA ]
[-] EMBL CNS09DLL [ CATCATGGTGCTGCGGGCGGTTGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTTTGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCGGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTTTTGCGAATT TAAAAA]
[-] EMBL CNS09CLF [ GAGTTTATGTGTCAAGGGGGCGATTTTACACGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACCGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTGCTC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGC ]
[-] EMBL CNS093TI [ GGGGCGATTTTAC CGCAAAAAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTGctc ]
[-] EMBL CNS09KOQ [ GGAACGCTGTGGTATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAA ]
consensusID : consensus_9975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 860 fasta sequence
[TGGGTAAAAAAATCCAATCGAGAATAACAGCAGCTTTCCGCGCG-TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG-AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG-G-ACGATACG-CGTCAACACGGCGAAACCGCAGCGCATCAAG-G-A-GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAG-CACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTACCGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGTGTTTGGCAACGTTATTAGCG]
[+] EMBL CNS09DLK [TGGGTAAAAAAAAACAATCGAGAATAACAGCAGCTTTCCGCGCG TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG G ACGATACG CGTCAACACGGCGAAACCGCAGCGCATCAAG G A GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAG CACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGT ]
[+] EMBL CNS09HLU [TGGGTAAACAAATCCAATCGAGAATAACAGCAGCTTTCCGCGCG TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG G ACGATACG CGTCAACACGGCGAAACCGCAGCGCATCAAG G A GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGT CCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGA ]
[+] EMBL CNS09MZR [ AAATCCAATCGAGAATAACAGCAGCTTTCCGCGCGCTTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG G ACGATACG CGTCAACACGGCGAAACCGCAGCGCATCAAG G A GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAG CACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTACCGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGTGTTTGGCAACGTTATTAGCG]
[+] EMBL CNS09CLE [ CAATCGAGAATAACAGCAGCTTTCCGCGCG TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGCAGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGCACGCGCACGATACGCCGTCAACACGGCGAAACCGCAGCGCATCAAGCGCAGGGGCAGCAATC ]
consensusID : consensus_9975#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 512 fasta sequence
[CAGATCGCAGAGGTGTATACAGCAGCTTTCCGCGCGTCGCAGGCGTCGCAAAACCTTTCCAAAGGCCGTAAACACCCCAATAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCTCGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGCGGGTTCGCCTTCATCCGAGTTTGAAAACGCGGAAGATGCGGNCGNCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGGGAAACCGAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGGAACCGAAAGCGGCGGAAGAGAACGAAGCGC]
[+] EMBL AL696205 [CAGATCGCAGAGGTGTATACAGCAGCTTTCCGCGCGTCGCAGGCGTCGCAAAACCTTTCCAAAGGCCGTAAACACCCCAATAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCTCGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGCGGGTTCGCCTTCATCCGAGTTTGAAAACGCGGAAGATGCGGNCGNCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGGGAAACCGAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGGAACCGAAAGCGGCGGAAGAGAACGAAGCGC]
consensusID : consensus_9975#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 347 fasta sequence
[CCCCGAGTTTACGTGTACTCGGTGGCCCTCTCGTAGGGAGGTGACAAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACTGGTGGACATACAGATGCCGATCCGACTACGAGGTCACAGAAGCACCGCGGGNTTCGCCTTCATCGAGGTTTGAAAACGCGGAAGATGCGGGCCGCCGACCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGT]
[+] EMBL AL932930 [CCCCGAGTTTACGTGTACTCGGTGGCCCTCTCGTAGGGAGGTGACAAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACTGGTGGACATACAGATGCCGATCCGACTACGAGGTCACAGAAGCACCGCGGGNTTCGCCTTCATCGAGGTTTGAAAACGCGGAAGATGCGGGCCGCCGACCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9975#2 CAGATCGCAGAGGTGTATACAGCAGCTTTCCGCGCGTCGCAGGCGTC-GCAAAACCTTTC 59
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 -----CCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCGCAAAACCTTTC 55
consensus_9975#1 ----------------------------------------------------TGGGTAAA 8
consensus_9975#2 CAAAGGCCGTAAACACCC-CAATAACGATG-ACGAGCGACAAACGCACCGTGTACGTCGG 117
consensus_9975#3 ------------------------------------CCCCGAGTTTAC-GTGTAC-TCGG 22
consensus_9975#0 CAAAAGCCGTAAACACCCGTAAAAACGATG-ACGAGCGACAAACGCACCGTGTACGTCGG 114
consensus_9975#1 AAAATCCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCACAAAACCTTTC 68
* * ** *
consensus_9975#2 TGGCC-TCTCGGAGG-AGGTGACAGAGAAG-CTAATTACCGACGCATTCATCCCGTTCGG 174
consensus_9975#3 TGGCCCTCTCGTAGGGAGGTGACA-AGAAG-CTAATTACCGACGCATTCATCCCGTTCGG 80
consensus_9975#0 TGGCC-TCTCGGAGG-AGGTGACAGAGAAG-CTAATTACCGACGCATTCATCCCGTTCGG 171
consensus_9975#1 CAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGG 128
* * * * * ** * * * ** *******************
consensus_9975#2 TGACCTGGTGGACATACAGATGCCGATC-GACTACGAG-TCACAGAAGCACCGCGGGTT- 231
consensus_9975#3 TGAC-TGGTGGACATACAGATGCCGATCCGACTACGAGGTCACAGAAGCACCGCGGGNTT 139
consensus_9975#0 TGACCTGGTGGACATACAGATGCCGATC-GACTACGAG-TCACAGAAGCACCGCGGGTT- 228
consensus_9975#1 TGACCTGGTGGACATACAGATGCCGATC-GACTACGAG-TCACAGAAGCACCGCGGGTT- 185
**** *********************** ********* ****************** *
consensus_9975#2 CGCCTTCATCCGAGTTTGAAAACGCGGAAGATGCGGNCGNC--GCCGTCGACAACATGAA 289
consensus_9975#3 CGCCTTCATCGAGGTTTGAAAACGCGGAAGATGCGGGCCGCCGACCGTCGACAACATGAA 199
consensus_9975#0 CGCCTTCATC-GAGTTTGAAAACGCGGAAGATGCGGCCGCC--GCCGTCGACAACATGAA 285
consensus_9975#1 CGCCTTCATC-GAGTTTGAAAACGCGGAAGATGCGGCCGCC--GCCGTCGACAACATGAA 242
********** *********************** * * ****************
consensus_9975#2 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGGGAAACCG-AGCGCATCAA 348
consensus_9975#3 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAA 259
consensus_9975#0 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAA 345
consensus_9975#1 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAA 302
***************************************** ******* **********
consensus_9975#2 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGC 408
consensus_9975#3 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGC 319
consensus_9975#0 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGC 405
consensus_9975#1 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGC 362
********************************************* **************
consensus_9975#2 AACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGA 468
consensus_9975#3 AACGCTCAAGAACGATGGGGAGAATGGT-------------------------------- 347
consensus_9975#0 AACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGA 465
consensus_9975#1 AACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGA 422
****************************
consensus_9975#2 GGTGCAGCCGAAGGAACCGAAAGCGGCGGAAGAGAACGAAGCGC---------------- 512
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 GGTGCAGCCGAAG-AACCGAAAGCGGCGGAAGAGAA-GAAGCGCAACCCGCAGGTGTTCT 523
consensus_9975#1 GGTGCAGCCGAAG-AACCGAAAGCGGCGGAAGAGAA-GAAGCGCAACCCGCAGTGTTCTT 480
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 TCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATG 583
consensus_9975#1 CGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGT 540
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 TGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCT 643
consensus_9975#1 GGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTA 600
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 ACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTA 703
consensus_9975#1 CAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC 660
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 CCGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACT 763
consensus_9975#1 CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACTT 720
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 TCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGA 823
consensus_9975#1 CATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAA 780
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 ATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCG 883
consensus_9975#1 TGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT 840
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 TGTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGGATCGA 943
consensus_9975#1 GTTTGGCAACGTTATTAGCG---------------------------------------- 860
consensus_9975#2 ------------------------------------------------------------
consensus_9975#3 ------------------------------------------------------------
consensus_9975#0 AGGGCGGACGAGTGCAGCAGAAGGTGACGATTGTCCCTGTGGCGAAGTGAAGGGTTAATA 1003
consensus_9975#1 ------------------------------------------------------------
consensus_9975#2 -----------------------------
consensus_9975#3 -----------------------------
consensus_9975#0 AAAAAAGCAGGTGATGCGAATTGTAAAAA 1032
consensus_9975#1 -----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||