cluster # 9988

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Anopheles gambiae
cluster # 9988 cluster # 9988 Sequences # 25 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9988#0 length = 1147 sequences # 4
consensus_9988#1 length = 1012 sequences # 13
consensus_9988#2 length = 812 sequences # 1

consensus_9988#3 length = 620 sequences # 5
consensus_9988#4 length = 421 sequences # 1
consensus_9988#5 length = 395 sequences # 1

consensusID : consensus_9988#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1147
fasta sequence

                              [TGTTTTATTTTTGTTCGTTCAACCCGACCCGCGCCCAACATTGCACACCCACTTAAAGTCGATTAAGCTATCACCACAATGGAATGAATGTGTAAAACTAAACCTTAAACAATAAACGAATGCACCGTTTAAATCAAACTAACTTTAACTTATCAGTCTGAAATCCCTGCTGATACGGCGACAAAGAACCTTAGGAAGTCCAACCCATTATTTGCTTTTTGAAAAAAAGAAAAGAAATACATAA-AAAAATGGAGAGCGATACAAAAATTTAACTGTAGCATGCATTTGGGAAGGCTTTTCTCTTAGGAGCTTGGGTACGGTCAAGCCGGAAAGCCAAACGCTTGCAGTCAATTGTGCTTCTGCTTGGTCGCGCCACTGCTCGAGCCGGAGCCTAGAATCTTCTTGCGCTGGGCAAACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGTTAAGCAGCTGCGTCTCTGCGCTGATCGGCAAAAAGTGGCGACACGAAACGGCGATCCCGG]

[+] EMBL CNS08ZXC             [TGTTTTATTTTTGTTCGTTCAACCCGACCCGCGCCCAACATTGCACACCCACTTAAAGTCGATTAAGCTATCACCACAATGGAATGAATGTGTAAAACTAAACCTTAAACAATAAACGAATGCACCGTTTAAATCAAACTAACTTTAACTTATCAGTCTGAAATCCCTGCTGATACGGCGACAAAGAACCTTAGGAAGTCCAACCCATTATTTGCTTTTTGAAAAAAAGAAAAGAAATACATAA AAAAATGGAGAGCGATACAAAAATTTAACTGTAGCATGCATTTGGGAAGGCTTTTCTCTTAGGAGCTTGGGTACGGTCAAGCCGGAAAGCCAAACGCTTGCAGTCAATTGTGCTTCTGCTTGGTCGCGCCACTGCTCGAGCCGGAGCCTGGGGTTTTCTTGCGCTGGGCAAACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAAAACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTGGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGAAAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAAC                                                                                                                                                                                    ]
[-] EMBL BM578268             [                            CCGCGCCCAACATTGCACACCCACTTAAAGTCGATTAAGCTATCACCACAATGGAATGAATGTGTAAAACTAAACCTTAAACAATAAACGAATGCACCGTTTTAATCAAACTAACTTTAACTTATCAGTCTGAAATCCCTGCTGATACGGCGACAAAGAAACTTAGAAAGTCCAACCCATTATTTGCTTTTTGAAAAAAA AAAAGAAATACATAATAAAAATGGAGAGCAATACAAAAGTTTAACTGTAGCATGCATTTGGGAAGGCTCTTCTCTTAGGAGCTTGGGTACGGTCAAGCCGGAAAGCCAAACGCTTGCAGTCAATTGTGCTTCTGCTTGGTCGCGCCACTGCTCGAGCCGGAGCCTAGAATCTTCTTGCGCTGGGCAAACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08ZXB             [                                                                                                                        TGCACCGTTTAAATCAAACTAACTTTAACTTATCAGTCTGAAATCCCTGCTGATACGGCGACAAAGAACCTTAGGAAGTCCAACCCATTATTTGCTTTTTGAAAAAAAGAAAAGAAATACATAA AAAAATGGAGAGCGATACAAAAATTTAACTGTAGCATGCATTTGGGAAGGCTTTTCTCTTAGGAGCTTGGGTACGGTCAAGCCGGAAAGCCAAACGCTTGCAGTCAATTGTGCTTCTGCTTGGTCGCGCCACTGCTCGAGCCGGAGCCTAGAATCTTCTTGCGCTGGGCAAACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCTTGACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGTTAAGCAGCTGCGTCTCTGCGCTG                                     ]
[-] EMBL BM613025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGAAGGTAAAGTTGTACGTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGTTAAGCAGCTGCGTCTCTGCGCTGATCGGCAAAAAGTGGCGACACGAAACGGCGATCCCGG]




>consensus_9988#0
TGTTTTATTTTTGTTCGTTCAACCCGACCCGCGCCCAACATTGCACACCCACTTAAAGTC
GATTAAGCTATCACCACAATGGAATGAATGTGTAAAACTAAACCTTAAACAATAAACGAA
TGCACCGTTTAAATCAAACTAACTTTAACTTATCAGTCTGAAATCCCTGCTGATACGGCG
ACAAAGAACCTTAGGAAGTCCAACCCATTATTTGCTTTTTGAAAAAAAGAAAAGAAATAC
ATAAAAAAATGGAGAGCGATACAAAAATTTAACTGTAGCATGCATTTGGGAAGGCTTTTC
TCTTAGGAGCTTGGGTACGGTCAAGCCGGAAAGCCAAACGCTTGCAGTCAATTGTGCTTC
TGCTTGGTCGCGCCACTGCTCGAGCCGGAGCCTAGAATCTTCTTGCGCTGGGCAAACATG
TGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAGTAC
AGGTACGAGAAGGTAAAGTTGTACGTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTG
GCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTAC
AGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGACGGCGTCGATCAGG
TTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGC
GGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATC
ACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAA
GCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAG
TCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGC
ATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATC
GGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAG
TTAATGTTAAGCAGCTGCGTCTCTGCGCTGATCGGCAAAAAGTGGCGACACGAAACGGCG
ATCCCGG

consensusID : consensus_9988#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1012
fasta sequence

                              [AACGGTGCATTCGTT-TATTGTTTAAGGTTTAGTTTTACACATTCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT-AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG-TAGCTGCACAGCAGCT-CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG-CCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCAGGTCCAACTGTCCGGACAGCAAGTTAGCAAGTACACGTCAGAACCCA]

[+] EMBL CNS08X4D             [AACGGTGCATTCGTT TATTGTTTAAGGTTTAGTTTTACACATTCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGAAACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAGCTGCACAGCAGCC CTCCCAAAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTTAGCCCACAAAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTCCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAAAAGA                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS0971H             [   GGTGCATTCGTT TATTGTTTAAGGTTTAGCTTTACACATTCATTCCATTGTGGTGAAAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATTTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTTCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAGCTGCACAGCAGCC CTCCCAGAAAGCCACAAGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTTAG CCACAAAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAAAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTTCAGGGATTGGCCGTGTACGG GAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTA                                                                                                                                                                             ]
[+] EMBL CNS09KVG             [     TGCATTCGTT TATTGTTTAAGGTTTAGTTTTACACATTCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAGCTGCACAGCAGCT CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTATCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGT                                                                       ]
[+] EMBL CNS09B9I             [         aTCGTTATATTGTTTAAGGTTTAGTTTTACACATTCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAGCTGCACAGCAGCTCCTCCCAGAAAGCCACAGGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACAAAGTAGCTGTATCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCAC                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08Y61             [                                          TTCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAG TGCACAGCAGCT CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCAGGTCCAACTGTCCGGACAGCAAGTTAGCAAGTACACG          ]
[-] EMBL CNS08X4C             [                                           TCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTTAAAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAG TGCACAGCAGCT CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCAGGTCCAACTGTCCGGACAGCAAGT                       ]
[-] EMBL CNS09KVF             [                                                               CTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAGTTAG TGCACAGCAGCT CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTATCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCAGGTCCAACTGTCCGGACAGCAAGTT                      ]
[+] EMBL CNS08Y62             [                                                               CTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTGGGGTTGAACGAACAAAAATAAAACTAAAATTTTTT AAAGGAAATGCTACTCAAATGGCTATTTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATCCCACACTCCATTTGCCCGTTTCGCGGATGTAGCTTTGGGCCCAG TAGCTGCACAGCAGCC CTCCCAGAAAGCCACAGGGATACATCGGGATGAAGATCGTTTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACAAAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS0971G             [                                                                                           GTTGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTT AAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACGTGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAGTTAG TGCACAGCAGCC CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCAGGTCCAACTGTCCGGACAGCAAGTTAGCAAGTACACGTCAGAACCCA]
[-] EMBL BX627174             [                                                                                                                                                                                                                                                                 GGGCAAACATGTGCAGATACATNTGCGNAAAGAGGGGCATATAGCAGACGCCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGACCCGATTCGGCAATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAG TAGCTGCACAGCAGCT CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTG                                                                                                             ]
[+] EMBL CNS08RWD             [                                                                                                                                                                                                                                                                     AAAAATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGAGGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08RWC             [                                                                                                                                                                                                                                                                                                                                                                                                                                 ACAGCAGCT CTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAG                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09B9H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGAAGCAGCAAGTGAG CCACATAGTAGCTGTATCGAATGATTTCGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCA GTCCAACTG                                     ]




>consensus_9988#1
AACGGTGCATTCGTTTATTGTTTAAGGTTTAGTTTTACACATTCATTCCATTGTGGTGAT
AGCTTAATCGACTTTAAGTGGGTGTGCAATGTTGGGCGCGGGTCGGGTTGAACGAACAAA
AATAAAACTAAAATGTTTTAAAGGAAATGCTACTCAAATGGCTATGTTTAATCGAGAACG
TGACCGTCATGGATTAGTTGGCTTTTGTCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGA
AAACCTTGCGCCGCTGGGCAAACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGC
AGACGGCCATAATCCAGATGAAGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGGCA
ATTCCACACTCCATTTGCCCGTATCGCGGATGTAGCTTTGGGCCCAGTAGCTGCACAGCA
GCTCTCCCAGAAAGCCACACGGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGA
GCAGCGACGGTACGGCTGGAAGCAGCAAGTGAGCCACATAGTAGCTGTACCGAATGATTT
CGGTCAAACTCCAACAGAACAGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTG
TGCCTTCGATAGCCCCCGCAACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCG
CTACGTTGCTTGGGACGATACCGACCATGGCATGGACCACCTCAAGTATTGCTAGCATTT
GAAAGAAGAATGTCGCTTGCCCCACGCGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTA
CGGCGAAGTGCTGAATAAATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTAT
TGTACAGTGTAAGGTATCCTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCA
TTGCTCGGCTGGGTCGGTAAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTT
ACGCAGGTCCAACTGTCCGGACAGCAAGTTAGCAAGTACACGTCAGAACCCA

consensusID : consensus_9988#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence

                              [AGNGAAAGTAATACATNAAAATGGAGAGCAATACTTAAAGTTTAACTGTAGCATGCATTTGGGAAGGCTTTTCTCTTAGAGCTTGGGTACGGTTCAAGCCGGGAAAGCCANACGCTTNCAGTCAATTGTGCTTCTGCTTGGTCGCAGCCAACTGCTCGAGCCGGAGCTTAGAATCTTCTTGCCTGGCCATACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGNGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAAATCTCGAGTAGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGTTAAGCAGCTGCGTCTTGTAAACCTCGGGGATT]

[-] EMBL AL933019             [AGNGAAAGTAATACATNAAAATGGAGAGCAATACTTAAAGTTTAACTGTAGCATGCATTTGGGAAGGCTTTTCTCTTAGAGCTTGGGTACGGTTCAAGCCGGGAAAGCCANACGCTTNCAGTCAATTGTGCTTCTGCTTGGTCGCAGCCAACTGCTCGAGCCGGAGCTTAGAATCTTCTTGCCTGGCCATACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGAAGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGNGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAAATCTCGAGTAGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGTTAAGCAGCTGCGTCTTGTAAACCTCGGGGATT]




>consensus_9988#2
AGNGAAAGTAATACATNAAAATGGAGAGCAATACTTAAAGTTTAACTGTAGCATGCATTT
GGGAAGGCTTTTCTCTTAGAGCTTGGGTACGGTTCAAGCCGGGAAAGCCANACGCTTNCA
GTCAATTGTGCTTCTGCTTGGTCGCAGCCAACTGCTCGAGCCGGAGCTTAGAATCTTCTT
GCCTGGCCATACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACC
GCCCACAGGAAGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGNGCATTTCGATGCT
CCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGGTTGAGGGC
GTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACC
CGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGA
CAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTAC
AAATCTCGAGTAGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAG
CGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACA
CCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGG
TTCCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGT
TAAGCAGCTGCGTCTTGTAAACCTCGGGGATT

consensusID : consensus_9988#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 620
fasta sequence

                              [GTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGG-ACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGCGACAGTACCTGGAACGTGGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTTTGTGCAGTTAATGTTAAGCAGCTGCGTCTCTGC--GCTCGGACGCGTGGGCGG]

[-] EMBL BM640495             [GTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGG ACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTGTGTGCAGTTAATGTTAAGCAGCTGCGTCTCTGC  GCTCGGACGCGTGGGCGG]
[-] EMBL BX619608             [                                                                                                    CTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGAACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCTGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTGGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTTTGTGCAGTTAATGTTAAGCAGCTGCGT                          ]
[-] EMBL AL930978             [                                                                                                                                         CGGG ACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGCGACAGTACCTGGAACGTGGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAATAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTTTGTGCAG TAATG TAAGCAGCTGCGTCTCTGCAACCTCGGGCG         ]
[-] EMBL BX606669             [                                                                                                                                                                             CGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGCGACAGTACCTGGAACGTGGTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAATAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGTAACCAGCGTTTGTGCAGTTAATGTTAAGCAGCTGCGT                          ]
[-] EMBL BX615398             [                                                                                                                                                                                     ATGATCTACGTCCCCGACCAGGCCAGTATGGCCAGCGGAAGACCCGGTGAAACTTTGCCCGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGCGACCGTACCTGGAACGTGGTGATGACC                                                                                                                                                                                                                                                                                                                         ]




>consensus_9988#3
GTGTTGGGCATTTCGATGCTCCACTGTTTCGTGTTGGCCACGTGCGACTGGGCCCAGAAG
AAGCACAGCAGCTCACCGGTCACGCCGGTCGGGTACAGCACTATGAAGGTGGTGTAGCGC
AGAAAGATGAGCAGCTGCGGGACGGCGTCGATCAGGTTGAGGGCGTAGTACGCGTATCGA
ATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGAAACTTTGCCA
GTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGCGACAGTACCTGGAACGTG
GTGATGACCGGATTGCTCGGCACGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCT
GCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCC
TTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGG
GCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATA
GTTTCCGACGTGCTTACGTAACCAGCGTTTGTGCAGTTAATGTTAAGCAGCTGCGTCTCT
GCGCTCGGACGCGTGGGCGG

consensusID : consensus_9988#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 421
fasta sequence

                              [CGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCAAGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGCGGACGCGTGG]

[-] EMBL BM642930             [CGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCAAGATCCGCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATTTGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGCGGACGCGTGG]




>consensus_9988#4
CGATCAGGTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGTA
TGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAGA
CGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCAAGATCC
GCGTGAAAGCGTGTACAATCTCGAGTAGGGCTGCATTTTGGAACAGGATGACGGTGAATC
CAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCAGCT
GATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGGATT
TGACGATCGGGGACGGTTCCTTGGCAGCCATAGTTTCCGACGTGCTTACGCGGACGCGTG
G

consensusID : consensus_9988#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 395
fasta sequence

                              [CAGATCGCCCGAGGTNACAGTTGGACTGCGTACTACGAAAAAGCAGCTACGCTTACTTGCTTAACAATTTACCGACCAGCCGAGCATGGCACAGGAAAGAGGAAACAATCCGTCCTAGTTAAAGGATACTTACACTGTACATACGGGTCAATTTGCAGGCTGGGACGTACATTTTCGTGCAATTTATTCAGCACTTCGCCGTACACGGGCAATCCCTGGACACACTGTGGGAGCCCGCGTGGGGCAAAGCGAAATTTCTTCTTTTCAAATTGCTAACAATTACTTGAGGTGGGTCCATGCCCATGGTCGGGTTATCGGTCCCAAGCAACGTAACGATACGTTCCTGCAGGTGTTCGGACGCTGCATGATCGTTGCGGGGGCTATCGAAGGCCACA]

[+] EMBL AL697120             [CAGATCGCCCGAGGTNACAGTTGGACTGCGTACTACGAAAAAGCAGCTACGCTTACTTGCTTAACAATTTACCGACCAGCCGAGCATGGCACAGGAAAGAGGAAACAATCCGTCCTAGTTAAAGGATACTTACACTGTACATACGGGTCAATTTGCAGGCTGGGACGTACATTTTCGTGCAATTTATTCAGCACTTCGCCGTACACGGGCAATCCCTGGACACACTGTGGGAGCCCGCGTGGGGCAAAGCGAAATTTCTTCTTTTCAAATTGCTAACAATTACTTGAGGTGGGTCCATGCCCATGGTCGGGTTATCGGTCCCAAGCAACGTAACGATACGTTCCTGCAGGTGTTCGGACGCTGCATGATCGTTGCGGGGGCTATCGAAGGCCACA]




>consensus_9988#5
CAGATCGCCCGAGGTNACAGTTGGACTGCGTACTACGAAAAAGCAGCTACGCTTACTTGC
TTAACAATTTACCGACCAGCCGAGCATGGCACAGGAAAGAGGAAACAATCCGTCCTAGTT
AAAGGATACTTACACTGTACATACGGGTCAATTTGCAGGCTGGGACGTACATTTTCGTGC
AATTTATTCAGCACTTCGCCGTACACGGGCAATCCCTGGACACACTGTGGGAGCCCGCGT
GGGGCAAAGCGAAATTTCTTCTTTTCAAATTGCTAACAATTACTTGAGGTGGGTCCATGC
CCATGGTCGGGTTATCGGTCCCAAGCAACGTAACGATACGTTCCTGCAGGTGTTCGGACG
CTGCATGATCGTTGCGGGGGCTATCGAAGGCCACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9988#0      TGTTTTATTTTTGTTCGTTCAACCCGACCCGCGCCCAACATTGCACACCCACTTAAAGTC 60
consensus_9988#2      ------------------------------------------------------------
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      ------------------------------------------------------------
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      GATTAAGCTATCACCACAATGGAATGAATGTGTAAAACTAAACCTTAAACAATAAACGAA 120
consensus_9988#2      ------------------------------------------------------------
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      ------------------------------------------------------------
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      TGCACCGTTTAAATCAAACTAACTTTAACTTATCAGTCTGAAATCCCTGCTGATACGGCG 180
consensus_9988#2      ------------------------------------------------------------
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      ----------------------------AACGGTGCATTCGTTTATTGTTTAAGGTTTAG 32
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      ACAAAGAACCTTAGGAAGTCCAACCCATTATTTGCTTTTTGAAAAAAAGAAAAGAAATAC 240
consensus_9988#2      ----------------------------------------------AGNGAAAGTAATAC 14
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      TTTTACACATTCATTCCATTGTGGTGATAGCTTAATCGACTTTAAGTGGGTGTGCAATGT 92
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      ATAAAAAAATGGAGAGCGATACA-AAAATTTAACTGTAGCATGCATTTGGGAAGGCTTTT 299
consensus_9988#2      ATNAAAA--TGGAGAGCAATACTTAAAGTTTAACTGTAGCATGCATTTGGGAAGGCTTTT 72
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      TGGGCGCGGGTCGGGTTGAACGAACAAAAATAAAACTAAAATGTTTTAAAGGAAATGCTA 152
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      CTCTTAGGAGCTTGGGTACGGT-CAAGCCGG-AAAGCCAAACGCTTGCAGTCAATTGTGC 357
consensus_9988#2      CTCTTAG-AGCTTGGGTACGGTTCAAGCCGGGAAAGCCANACGCTTNCAGTCAATTGTGC 131
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      CTCAAA------TGGCTATGTT--TAATCGAGAACGTGAC-CGTCATGGATTAGTTG-GC 202
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      TTCTGCTTGGTCGCGCC--ACTGCTCGAGCCGGAGCCTAGAATCTTCTTGCGCTGGGCAA 415
consensus_9988#2      TTCTGCTTGGTCGCAGCCAACTGCTCGAGCCGGAGCTTAGAATCTTCTTGC-CTGGCCAT 190
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      TTTTG-TCAGCTTCTGCCGGGTCTGCGTTCCTCGCCCGAAAACCTTGCGCCGCTGGGCAA 261
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      ACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGA 475
consensus_9988#2      ACATGTGCAGGTACAGCTGAGGGAACAGTGGAATGTAGAGCAGCATCACCGCCCACAGGA 250
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      ------------------------------------------------------------
consensus_9988#1      ACATGTGCAGATACATCTGCGGAAAGAGGGGCATATAGCAGACGGCCATAATCCAGATGA 321
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      AGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGG-CATTTCGATGCTCCACTGTTTC 534
consensus_9988#2      AGTACAGGTACGAGAAGGTAAAGTTGTACGTGTTGGNGCATTTCGATGCTCCACTGTTTC 310
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      -----------------------------GTGTTGGG-CATTTCGATGCTCCACTGTTTC 30
consensus_9988#1      AGTAGTAAAAGGAGAAGCTAAAATTGAACCGATTCGG-CAATTCCACACTCCATTTGCCC 380
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      GTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTC 594
consensus_9988#2      GTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAG------------------- 351
consensus_9988#4      ------------------------------------------------------------
consensus_9988#3      GTGTTGGCCACGTGCGACTGGGCCCAGAAGAAGCACAGCAGCTCACCGGTCACGCCGGTC 90
consensus_9988#1      GTATCGCGGATGTAGCTTTGGGCCCAGTAGCTGCACAGCAGCTCTCCCAGAAAGCCACAC 440
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      GGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGACGGCGTCG 654
consensus_9988#2      ------------------------------------------------------------
consensus_9988#4      ----------------------------------------------------------CG 2
consensus_9988#3      GGGTACAGCACTATGAAGGTGGTGTAGCGCAGAAAGATGAGCAGCTGCGGGACGGCGTCG 150
consensus_9988#1      GGATACATCGGGATGAAGATCGTGTACCGCAGCCAAACGAGCAGCGACGGTACGGCTGGA 500
consensus_9988#5      -----------------------------CAGATCGCCC-GAGGTNACAGTTGGACTGCG 30
                                                                                  

consensus_9988#0      ATCAG---GTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGT 711
consensus_9988#2      --------GTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGT 403
consensus_9988#4      ATCAG---GTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGT 59
consensus_9988#3      ATCAG---GTTGAGGGCGTAGTACGCGTATCGAATGATCTCCGTCACCGACCAGGCCAGT 207
consensus_9988#1      AGCAGCAAGTGAGCCACATAGTAGCTGTACCGAATGATTTCGGTCAAACTCCAACAGAAC 560
consensus_9988#5      TACTACGAAAAAGCAGCTACGCTTACTTGCTTAACAATTT-----ACCGACCAGCCGAGC 85
                                      *   *      *    **  ** *     *    ***    *  

consensus_9988#0      ATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAG 771
consensus_9988#2      ATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAG 463
consensus_9988#4      ATGGCAAGCGGAAGACCCGGTGATACCTTGCCAGTCGGTGTAGCCATCACAACACCGCAG 119
consensus_9988#3      ATGGCAAGCGGAAGACCCGGTGAAACTTTGCCAGTCGGTGTAGCCATCACAACACCGCAG 267
consensus_9988#1      AGCGCTAGTGGAAGCCCTGGGGATTTCTGGCCGGTCGGTGTGCCTTCGATAGCCCCCGCA 620
consensus_9988#5      ATGGCACAGGAAAGAGGAAACAATCCGTC-CTAGTTAAAGGATACTT-ACACTGTACATA 143
                      *  **    * ***        *    *  *  **    *        * *         

consensus_9988#0      ACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATC 831
consensus_9988#2      ACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCACGATC 523
consensus_9988#4      ACGACCATCACCCGGGACAGTACCTGGAACGTTGTGATGACCGGATTGCTCGGCAAGATC 179
consensus_9988#3      ACGACCATCACCCGCGACAGTACCTGGAACGTGGTGATGACCGGATTGCTCGGCACGATC 327
consensus_9988#1      ACGATCATGCAGCGTCCGAACACCTGCAGGAACGTCATCGCTACGTTGCTTGGGACGATA 680
consensus_9988#5      CGGGTCAATTTGCAGGCTGGGACGTACATTTTCGTGCAATTTATTCAGCACTTCGCCGTA 203
                        *  **     *        ** *  *     **            **         * 

consensus_9988#0      CGCGTGAAAGCGTGTACAA-TCTCGAGTAGGGCT-GCATTTTGGAACAGGATGACGGTGA 889
consensus_9988#2      CGCGTGAAAGCGTGTACAAATCTCGAGTAGG-CT-GCATTTTGGAACAGGATGACGGTGA 581
consensus_9988#4      CGCGTGAAAGCGTGTACAA-TCTCGAGTAGGGCT-GCATTTTGGAACAGGATGACGGTGA 237
consensus_9988#3      CGCGTGAAAGCGTGTACAA-TCTCGAGTAGGGCT-GCATTTTGGAACAGGATGACGGTGA 385
consensus_9988#1      CCGACCATGGCATGGACCA-CCTCAAGTATTGCTAGCATTTGAAAGAAGAATGTCGCTTG 739
consensus_9988#5      CACGGGCAATCCCTGGACA--CACTGTGGGAGCCCGCGTGGGGCAAAGCGAAATTTCTTC 261
                      *         *       *  * *        *  ** *     *     *      *  

consensus_9988#0      ATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCA 949
consensus_9988#2      ATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCA 641
consensus_9988#4      ATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCA 297
consensus_9988#3      ATCCAAGATAGTCCCAGAGCGTTTTTTCCGTGCCCTTGTCGATGGTGTAGTAAGCTATCA 445
consensus_9988#1      CCCCACG-CGGCTCCACAGTGTGTCCAGGGATTGGCCGTGTACGGCGAAGTGCTGAATAA 798
consensus_9988#5      TTTTCAAATTGCTAACAATTACTTGAGGTGGGTCCATGCCCATGGTCGGGTTATCGGTCC 321
                                *      *     *     *       *   * **    **      *  

consensus_9988#0      GCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGG 1009
consensus_9988#2      GCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGG 701
consensus_9988#4      GCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGG 357
consensus_9988#3      GCTGATATAGCATGTAACACCAGCCGACGACTTGGGCTGCGTTGTACAGAATCAGGTAGG 505
consensus_9988#1      ATTGCACGAAAATGTACGTCCAGCCTGCAAATTGAGCCGTATTGTACAGTGTAAGGTATC 858
consensus_9988#5      CAAGCAACGTAACGATACGTTCCTGCAGGTGTTCGGACGCTGCATGATCGTTGCGGGGGC 381
                         *       * *                 **  *  *     *      *  **    

consensus_9988#0      ATTTGACGATCGGGGA------------------CGGTTCC-TTGGCAGCCATAGTTTCC 1050
consensus_9988#2      ATTTGACGATCGGGGA------------------CGGTTCCCTTGGCAGCCATAGTTTCC 743
consensus_9988#4      ATTTGACGATCGGGGA------------------CGGTTCC-TTGGCAGCCATAGTTTCC 398
consensus_9988#3      ATTTGACGATCGGGGA------------------CGGTTCC-TTGGCAGCCATAGTTTCC 546
consensus_9988#1      CTTTAACTAGGACGGATTGGTTTTCCTTCTTTTCCTGTGCCATTGCTCGGCTGGGTCGGT 918
consensus_9988#5      TATCGAAGGCCACA---------------------------------------------- 395
                        *  *                                                      

consensus_9988#0      GACGTGCTTACGTAACCA-GCGTGTGTGCAGTTA---ATGTTAAGCAGCTGCGTCTCTGC 1106
consensus_9988#2      GACGTGCTTACGTAACCA-GCGTGTGTGCAGTTA---ATGTTAAGCAGCTGCGTCT-TGT 798
consensus_9988#4      GACGTGCTTACGCGGAC--GCGTGG----------------------------------- 421
consensus_9988#3      GACGTGCTTACGTAACCA-GCGTTTGTGCAGTTA---ATGTTAAGCAGCTGCGTCTCTGC 602
consensus_9988#1      AAATTGTTTAAGCAAGTAAGCGTAGCTGCTTTTTCGTAGGTTACGCAGGTCCAACTGTCC 978
consensus_9988#5      ------------------------------------------------------------
                                                                                  

consensus_9988#0      GCTGATCGGCAAAAAGTGGCGACACGAAACGGCGATCCCGG 1147
consensus_9988#2      AAACCTCGGGGATT--------------------------- 812
consensus_9988#4      -----------------------------------------
consensus_9988#3      GCTCGGACGCGTGGGCGG----------------------- 620
consensus_9988#1      GGACAGCAAGTTAGCAAGTACACGTCAGAACCCA------- 1012
consensus_9988#5      -----------------------------------------