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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1009#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 648 fasta sequence
[CGTCCAGGAGGTAAAACTGGTGGTGGAGGTGTTGCATCTTGGTCAGAAAGTAACCGAGATAGAAGAGAACGTTTACGACAACTTGCATTGGAAACTATTGATCTTAATAAAGATCCATATTTTATGAAAAATCATTTAGGATCATATGAATGTAAATTATGTTTAACTCTTCACAATAATGAAGGTAGTTATTTAGCTCATACACAGGGTAAAAAGCATCAAGCAAATTTAGCTAGAAGAGCTGCTAAAGAAGCAAAGGAAGCACCTCAAACACTTGCACCTGAAAAACCTCGTGTAGAACCAAAAAAATTTGTAAAAATTGGAAGACCTGGTTACAGAGTAACTAAACAACGTGATCCAGAATCAGGACAACAAAGTTTATTGTTTCAAGTCGATTATCCAGAAGTTGCAGATAATGTTATTCCAAGACATAGATTTATGTCAGCATATGAACAAAGAGTTGAACCACCAGATCGTAAATGGCAATACTTATTATTTGCTGCTGAGCCTTATGAAACTATAGCTTTCAAAGTTCCTAGTAGAGAAGTTGAAAAGGCAGAAGGCAAGTTTTGGACACATTGGAACAAAGATACAAAACAATTTTTTTTACAATTTGCATTTAAAAATGAAAAACCTTCAGTTGGCAAA]
[+] EMBL BI515479 [CGTCCAGGAGGTAAAACTGGTGGTGGAGGTGTTGCATCTTGGTCAGAAAGTAACCGAGATAGAAGAGAACGTTTACGACAACTTGCATTGGAAACTATTGATCTTAATAAAGATCCATATTTTATGAAAAATCATTTAGGATCATATGAATGTAAATTATGTTTAACTCTTCACAATAATGAAGGTAGTTATTTAGCTCATACACAGGGTAAAAAGCATCAAGCAAATTTAGCTAGAAGAGCTGCTAAAGAAGCAAAGGAAGCACCTCAAACACTTGCACCTGAAAAACCTCGTGTAGAACCAAAAAAATTTGTAAAAATTGGAAGACCTGGTTACAGAGTAACTAAACAACGTGATCCAGAATCAGGACAACAAAGTTTATTGTTTCAAGTCGATTATCC ]
[+] EMBL BI514357 [ TAGCTAGAAGAGCTGCTAAAGAAGCAAAGGAAGCACCTCAAACACTTGCACCTGAAAAACCTCGTGTAGAACCAAAAAAATTTGTAAAAATTGGAAGACCTGGTTACAGAGTAACTAAACAACGTGATCCAGAATCAGGACAACAAAGTTTATTGTTTCAAGTCGATTATCCAGAAGTTGCAGATAATGTTATTCCAAGACATAGATTTATGTCAGCATATGAACAAAGAGTTGAACCACCAGATCGTAAATGGCAATACTTATTATTTGCTGCTGAGCCTTATGAAACTATAGCTTTCAAAGTTCCTAGTAGAGAAGTTGAAAAGGCAGAAGGCAAGTTTTGGACACATTGGAACAAAGATACAAAACAATTTTTTTTACAATTTGCATTTAAAAATGAAAAACCTTCAGTTGGCAAA]
consensusID : consensus_1009#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 253 fasta sequence
[ACAATTTGCATTTAAAAATGAAAAACCTTCAGTTGGCAAAGTACCACCTCCTCCTGTTCCTTTAATAAGGCCTGGATTAGGACCACCTATGGTACCAGTTCCACCACCACCAAGACCACCTATGTTTAATCCAGTACCACCACCACCAGCTCTTTTAGCAACAGGCATGCAAATACCTCCACCACCTCCTCATATAGCATAATCTTTTGATTAATAATAAAATAAAATAAAAAAATATTAATGAAAAAAAAAA]
[+] EMBL BI513136 [ACAATTTGCATTTAAAAATGAAAAACCTTCAGTTGGCAAAGTACCACCTCCTCCTGTTCCTTTAATAAGGCCTGGATTAGGACCACCTATGGTACCAGTTCCACCACCACCAAGACCACCTATGTTTAATCCAGTACCACCACCACCAGCTCTTTTAGCAACAGGCATGCAAATACCTCCACCACCTCCTCATATAGCATAATCTTTTGATTAATAATAAAATAAAATAAAAAAATATTAATGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1009#0 CGTCCAGGAGGTAAAACTGGTGGTGGAGGTGTTGCATCTTGGTCAGAAAGTAACCGAGAT 60
consensus_1009#1 ------------------------------------------------------------
consensus_1009#0 AGAAGAGAACGTTTACGACAACTTGCATTGGAAACTATTGATCTTAATAAAGATCCATAT 120
consensus_1009#1 ------------------------------------------------------------
consensus_1009#0 TTTATGAAAAATCATTTAGGATCATATGAATGTAAATTATGTTTAACTCTTCACAATAAT 180
consensus_1009#1 ------------------------------------------------------------
consensus_1009#0 GAAGGTAGTTATTTAGCTCATACACAGGGTAAAAAGCATCAAGCAAATTTAGCTAGAAGA 240
consensus_1009#1 -------------------------------------ACAATTTGCATTTAAAAATGAAA 23
* * ***** * * *
consensus_1009#0 GCTGCTAAAGAAGCAAAGGAAGCACCTCAAACACTTGCACCTGAAAAACCTCGTGTAGAA 300
consensus_1009#1 AACCTTCAGTTGGCAAAGTAC-CACCTCCTCCTGTTCCTTTAATAAGGCCTGGATTAGGA 82
* * ****** * ****** * ** * ** *** * *** *
consensus_1009#0 CCAAAAAAATTTGTAAAAATTGGAAGACCTGGTTACAGAGTAACTAAACAACGTGATCCA 360
consensus_1009#1 CCACCTA---TGGTACCAGTTCCACCACC--ACCA-AGACCACCTATGTT---TAATCCA 133
*** * * *** * ** * *** * *** * *** * *****
consensus_1009#0 GAATCAGGACAACAAAGTTTATTGTTTCAAGTCGATTATCCAGAAGTTGCAGATAATGTT 420
consensus_1009#1 GTACCACCACCACCAGCTCT----TTTAGCAACAGGCATGCAAATACCTCC-ACCACCTC 188
* * ** ** ** * * * *** * ** ** * * * * *
consensus_1009#0 ATTCCAAGACATAGATTTATGTCAGCATATGAACAAAGAGTTGAACCACCAGATCGTAAA 480
consensus_1009#1 CTCATATAGCATAATCTTTTG-------ATTAATAATAAAATAAAATAAAAAAATATTAA 241
* * **** ** ** ** ** ** * * ** * * * * **
consensus_1009#0 TGGCAATACTTATTATTTGCTGCTGAGCCTTATGAAACTATAGCTTTCAAAGTTCCTAGT 540
consensus_1009#1 TGAAAAAAAAAA------------------------------------------------ 253
** ** * *
consensus_1009#0 AGAGAAGTTGAAAAGGCAGAAGGCAAGTTTTGGACACATTGGAACAAAGATACAAAACAA 600
consensus_1009#1 ------------------------------------------------------------
consensus_1009#0 TTTTTTTTACAATTTGCATTTAAAAATGAAAAACCTTCAGTTGGCAAA 648
consensus_1009#1 ------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |