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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1019#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[GCAAGAGTATCGAGAACGTTGCATACAATTAAGGAACAATCACACAGTGTACCGCTTCAACGAGCCGCACGAAGCGAAACACGGATCGAGGGGGAGGGAAGGAGTAAGGAATAAGGCGGGAGAAAGAGAGAGAGAGAGAGAGAGAAGGGAGGGAGAAGAGGAATTCTTGGCTGGTTCGAGTCGAACAACGTGTAGCGGATCTTCTACGCAGGTATACAAGTAAGTACGTACGTGCGGGTCGCGTGTAGGGATACTCACGTAATGTAGGCCCGTTCCAGGAGATACCGTAAGACCTTGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA]
[+] EMBL BI512058 [GCAAGAGTATCGAGAACGTTGCATACAATTAAGGAACAATCACACAGTGTACCGCTTCAACGAGCCGCACGAAGCGAAACACGGATCGAGGGGGAGGGAAGGAGTAAGGAATAAGGCGGGAGAAAGAGAGAGAGAGAGAGAGAGAAGGGAGGGAGAAGAGGAATTCTTGGCTGGTTCGAGTCGAACAACGTGTAGCGGATCTTCTACGCAGGTATACAAGTAAGTACGTACGTGCGGGTCGCGTGTAGGGATACTCACGTAATGTAGGCCCGTTCCAGGAGATACCGTAAGACCTTGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA]
consensusID : consensus_1019#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence
[TTTTTTTTTTTGAATACTATTCTGTTTTCGAAATTTGATTGAATTGCAAAAATTTATAAATGCAACGCTCCTTTAATCTTTCCCCCTTTCGGTAATTTTTTTTCCTCTTTTAATCAATCCTTCCCTTTCCTAAATTTCAAAATAGTTGAAACAGTTTGGAAAAAATATAATTTTAAAATTCTCCTTTTAAGCTGAAAATTTGTTTAACGCCAATTTAAGTGGAGTTGGAGCTTTTTTAATATAAAATAATTGCAATTAACGGAACAGTGGTTCCAACCATTTTCAGAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA]
[+] EMBL BI508756 [TTTTTTTTTTTGAATACTATTCTGTTTTCGAAATTTGATTGAATTGCAAAAATTTATAAATGCAACGCTCCTTTAATCTTTCCCCCTTTCGGTAATTTTTTTTCCTCTTTTAATCAATCCTTCCCTTTCCTAAATTTCAAAATAGTTGAAACAGTTTGGAAAAAATATAATTTTAAAATTCTCCTTTTAAGCTGAAAATTTGTTTAACGCCAATTTAAGTGGAGTTGGAGCTTTTTTAATATAAAATAATTGCAATTAACGGAACAGTGGTTCCAACCATTTTCAGAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA]
consensusID : consensus_1019#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 258 fasta sequence
[TGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATGTATAATTTCTTTCTTAATCTTTCTTTTTTCTTTCCTCTTCAGTTTCTTATTTTTGTTACGTAAATTTGAAATTTGAAATTAGATTCATTTTTTATCTTTCGAGACTGTTTAACTTTCTCGAAA]
[+] EMBL BI513525 [TGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATGTATAATTTCTTTCTTAATCTTTCTTTTTTCTTTCCTCTTCAGTTTCTTATTTTTGTTACGTAAATTTGAAATTTGAAATTAGATTCATTTTTTATCTTTCGAGACTGTTTAACTTTCTCGAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1019#0 GCAAGAGTATCGAGAACGTTGCATACAATTAAGGAACAATCACACAGTGTACCGCTTCAA 60
consensus_1019#2 ------------------------------------------------------------
consensus_1019#1 ------------------------------------------------------------
consensus_1019#0 CGAGCCGCACGAAGCGAAACACGGATCGAGGGGGAGGGAAGGAGTAAGGAATAAGGCGGG 120
consensus_1019#2 ------------------------------------------------------------
consensus_1019#1 ------------------------------------------------------------
consensus_1019#0 AGAAAGAGAGAGAGAGAGAGAGAGAAGGGAGGGAGAAGAGGAATTCTTGGCTGGTTCGAG 180
consensus_1019#2 ------------------------------------------------------------
consensus_1019#1 ------------------------------------------------------------
consensus_1019#0 TCGAACAACGTGTAGCGGATCTTCTACGCAGGTATACAAGTAAGTACGTACGTGCGGGTC 240
consensus_1019#2 ------------------------------------------------------------
consensus_1019#1 ------TTTTTTTTTTTGAATACTATTCTGTTTTCGAAATTTGATTGAATTGCAAAAATT 54
consensus_1019#0 GCGTGTAGGGATACTCACGTAATGTAGGCCCGTTCCAGGAGATACCGTAAGACCTTGCTG 300
consensus_1019#2 -------------------------------------------------------TGCTG 5
consensus_1019#1 TATAAATGCAACGCTCCTTTAATCTTTCCCCCTTTCGGTAATTTTTTTTC--CTCTTTTA 112
* *
consensus_1019#0 TTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAG 360
consensus_1019#2 TTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAG 65
consensus_1019#1 ATCAATC-CTTCCCTTTCCTAAATTTCAAAATAGTTGAAACAGTTTGGAAAAAATAT--- 168
* ** ** * *** * * * ** ** * *** * *
consensus_1019#0 AAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTC----TTC 416
consensus_1019#2 AAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTC----TTC 121
consensus_1019#1 AATTTTAAAATTCTCCTTTTAAGCTGAA-AATTTGTTTAACGCCAATTTAAGTGGAGTTG 227
** *** *** * * ****** ** * ** *** * **
consensus_1019#0 GAAATTTGTAAAT----AATCAGGGCACAAGGGTCGAAAATGATTATCCAGCT--GTTCC 470
consensus_1019#2 GAAATTTGTAAATGTATAATTTCTTTCTTAATCTTTCTTTTTTCTTTCCTCTTCAGTTTC 181
consensus_1019#1 GAGCTTTTTTAAT--ATAAAATAATTGCAATTAACGGAACAGTGGTTCCAACC-ATTTTC 284
** *** * *** ** * *** ** *
consensus_1019#0 ATGCTGA----------------------------------------------------- 477
consensus_1019#2 TTATTTTTGTTACGTAAATTTGAAATTTGAAATTAGATTCATTTTTTATCTTTCGAGACT 241
consensus_1019#1 AGAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA---------- 334
*
consensus_1019#0 -----------------
consensus_1019#2 GTTTAACTTTCTCGAAA 258
consensus_1019#1 -----------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |