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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1161#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 643 fasta sequence
[ACATTTTATTATCTAATATTATTTAATTAAATTTTTATTAGAATTATTATAAAAATTCTTAATTACCATTAAAATCACTTTCCACAGAAGATAAATTAGAATACAATTTCTATCCTGTCGCGAGTGGACAGCTTCAATTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCACGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCAAATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACATACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTCTATCAATAGGTAAAGAAGGTGAGCCAAGTGCATTCCTCACGTATGCCGATCCAGAACCATTTGGAATCGGTTATTTTGGAGTATGCACTGGTTGGGGTGCTTCTGGTGAATGGTTAATCGAAGCCATATGTGTAGGTGGTCACGATCGTTATGTGAATCCAACAGCTCCACCAGTGGAAGGAGTAATAGATATAGGAAAATTTTGTTGGTGCGAAGCATCTGGTGGAATAATTCCACCATCTGCAGTTCAAGGAGGAAAAGATATTGATGGGAATGATTTGTACGTGGG]
[+] EMBL BI511379 [ACATTTTATTATCTAATATTATTTAATTAAATTTTTATTAGAATTATTATAAAAATTCTTAATTACCATTAAAATCACTTTCCACAGAAGATAAATTAGAATACAATTTCTATCCTGTCGCGAGTGGACAGCTTCAATTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCACGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCAAATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACATACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTC ]
[+] EMBL BI509433 [ TTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCACGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCAAATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACATACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTCTATCAATAGGTAAAGAAGGTGAGCCAAGTGCATTCCTCACGTATGCCGATCCAGAACCATTTGGAATCGGTTATTTTGGAGTATGCACTGGTTGGGGTGCTTCTGGTGAATGGTTAATCGAAGCCATATGTGTAGGTGGTCACGATCGTTATGTGAATCCAACAGCTCCACCAGTGGAAGGAGTAATAGATATAGGAAAATTTTGTTGGTGCGAAGCATCTGGTGGAATAATTCCACCATCTGCAGTTCAAGGAGGAAAAGATATTGATGGGAATGATTTGTACGTGGG]
consensusID : consensus_1161#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence
[GTAAAAAAAAATTTTCATTGTTATTCAAAAGAATGGCTATTTCACTTTCCACAGAAGATAAATTAGAATACAATTTCTATCCTGTCGCGAGTGGACAGCTTCAATTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCACGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCAAATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACATACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTCTATCAATAGGTAAAGAAGGTGAGCCAAGTGCATTCCTCACGTATGCCGATCCAGAACCATTTGGAATCGGTTATTTTGGAGTATGCACTGGTTGGGGTGCTTCTGGTGAATGGTTAATCGAAGATGTGAATCCAACAGCTCCACCAGTGGAAGGAGTAATAGATATAGGAAAATTTTGTT]
[+] EMBL BI946505 [GTAAAAAAAAATTTTCATTGTTATTCAAAAGAATGGCTATTTCACTTTCCACAGAAGATAAATTAGAATACAATTTCTATCCTGTCGCGAGTGGACAGCTTCAATTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCACGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCAAATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACATACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTCTATCAATAGGTAAAGAAGGTGAGCCAAGTGCATTCCTCACGTATGCCGATCCAGAACCATTTGGAATCGGTTATTTTGGAGTATGCACTGGTTGGGGTGCTTCTGGTGAATGGTTAATCGAAGATGTGAATCCAACAGCTCCACCAGTGGAAGGAGTAATAGATATAGGAAAATTTTGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1161#0 ACATTTTATTATCTAATATTATTTAATTAAATTTTTATTAGAATTATTATAAAAATTCTT 60
consensus_1161#1 --------------------GTAAAAAAAAATTTTCATTG---TTATTCAAAAG------ 31
* ** ******* *** ***** ***
consensus_1161#0 AATTACCATTAAAATCACTTTCCACAGAAGATAAATTAGAATACAATTTCTATCCTGTCG 120
consensus_1161#1 AATGGCTATT----TCACTTTCCACAGAAGATAAATTAGAATACAATTTCTATCCTGTCG 87
*** * *** **********************************************
consensus_1161#0 CGAGTGGACAGCTTCAATTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCA 180
consensus_1161#1 CGAGTGGACAGCTTCAATTCCGGATAAAAGCCCCAAATGATGCTCATATCGCTCTTACCA 147
************************************************************
consensus_1161#0 CGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCA 240
consensus_1161#1 CGGGCCCTCAAGAGGGAGAACCTATGTATGAAGTCTTCATTGGTGGTTGGAGCAATAGCA 207
************************************************************
consensus_1161#0 AATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACA 300
consensus_1161#1 AATCCGTAATCCGTAAAAATAGAACAAAGCCTGATGTTGCTGAGGTAGATACACCTGACA 267
************************************************************
consensus_1161#0 TACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTCTATCAA 360
consensus_1161#1 TACTTAGTGCAGATGAAATGCGTGGATTTTGGATAAGATGGAATGATGGTGTTCTATCAA 327
************************************************************
consensus_1161#0 TAGGTAAAGAAGGTGAGCCAAGTGCATTCCTCACGTATGCCGATCCAGAACCATTTGGAA 420
consensus_1161#1 TAGGTAAAGAAGGTGAGCCAAGTGCATTCCTCACGTATGCCGATCCAGAACCATTTGGAA 387
************************************************************
consensus_1161#0 TCGGTTATTTTGGAGTATGCACTGGTTGGGGTGCTTCTGGTGAATGGTTAATCGAAGCCA 480
consensus_1161#1 TCGGTTATTTTGGAGTATGCACTGGTTGGGGTGCTTCTGGTGAATGGTTAATCGAAG--- 444
*********************************************************
consensus_1161#0 TATGTGTAGGTGGTCACGATCGTTATGTGAATCCAACAGCTCCACCAGTGGAAGGAGTAA 540
consensus_1161#1 ------------------------ATGTGAATCCAACAGCTCCACCAGTGGAAGGAGTAA 480
************************************
consensus_1161#0 TAGATATAGGAAAATTTTGTTGGTGCGAAGCATCTGGTGGAATAATTCCACCATCTGCAG 600
consensus_1161#1 TAGATATAGGAAAATTTTGTT--------------------------------------- 501
*********************
consensus_1161#0 TTCAAGGAGGAAAAGATATTGATGGGAATGATTTGTACGTGGG 643
consensus_1161#1 -------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |