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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1168#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 507 fasta sequence
[GCGGCCGCGTTGCTTTTTTTCGAGATACATTCCGTGACAAGATTTTTTCTTTCATATCGAAATATCGTGATAATCAACTTTTTAACTTTCAAATTGTTTTCAATCAATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAATTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTGTCACGTACCTACGCTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATTTCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTCCATCGCTGATCACCCGCTGTGTATCACGCATCCCCACAGCTATATATATATGTGTCCAACACACTTGTAGCTTTCGCATACAATTTCTTCCCGTAATTTTCCGATCAACAATCTGTGCATATATATATCGCGCACACATGGTTTGCTTTCAGCCTTGGAAAAAAAAAAAAAAAAA]
[+] EMBL BI506700 [GCGGCCGCGTTGCTTTTTTTCGAGATACATTCCGTGACAAGATTTTTTCTTTCATATCGAAATATCGTGATAATCAACTTTTTAACTTTCAAATTGTTTTCAATCAATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAATTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTGTCACGTACCTACGCTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATTTCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTCCATCGCTGATCACCCGCTGTGTATCACGCATCCCCACAGCTATATATATATGTGTCCAACACACTTGTAGCTTTCGCATACAATTTCTTCCCGTAATTTTCCGATCAACAATCTGTGCATATATATATCGCGCACACATGGTTTGCTTTCAGCCTTGGAAAAAAAAAAAAAAAAA]
[+] EMBL BI507809 [GCGGCCGCGTTGCTTTTTTTCGAGATACATTCCGTGACAAGATTTTTTCTTTCATATCGAAATATCGTGATAATCAACTTTTTAACTTTCAAATTGTTTTCAATCAATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAATTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTGTCACGTACCTACGCTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATTTCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTCCATCGCTGATCACCCGCTGTGTATCACGCATCCCCACAGCTATATATATATGTGTCCAACACACTTGTAGCTTTCGCATACAATTTCTTCCCGTAATTTTCCGATCAACAATCTGTGCATATAT ]
consensusID : consensus_1168#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence
[TTCCGCTACGAAAAGCCACCTGTGAATCTATCTCGCAAATATTATACTACGAGAGAATCACTAAAAAAAAAAAAATCGATTTAGCGTTGAAATTCGTTTTATTCCCCGATATATTATTTTAAAATATATATATAAATTGAAAATAAACTTTTTTTCGAGATACATTCCGTGACAAGATTTTTTCTTTCATATCGAAATATCGGGATAATCAACTTTTTAACTTTCAAATTNNNTTCAATCAATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAATTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTNTCACGTACCTACGCTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATTTCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTC]
[+] EMBL BI509644 [TTCCGCTACGAAAAGCCACCTGTGAATCTATCTCGCAAATATTATACTACGAGAGAATCACTAAAAAAAAAAAAATCGATTTAGCGTTGAAATTCGTTTTATTCCCCGATATATTATTTTAAAATATATATATAAATTGAAAATAAACTTTTTTTCGAGATACATTCCGTGACAAGATTTTTTCTTTCATATCGAAATATCGGGATAATCAACTTTTTAACTTTCAAATTNNNTTCAATCAATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAATTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTNTCACGTACCTACGCTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATTTCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1168#0 ------------------------------------------------------------
consensus_1168#1 TTCCGCTACGAAAAGCCACCTGTGAATCTATCTCGCAAATATTATACTACGAGAGAATCA 60
consensus_1168#0 ------------------------------------------------------------
consensus_1168#1 CTAAAAAAAAAAAAATCGATTTAGCGTTGAAATTCGTTTTATTCCCCGATATATTATTTT 120
consensus_1168#0 ---------------GCGGCCGCGTTGCTTTTTTTCGAGATACATTCCGTGACAAGATTT 45
consensus_1168#1 AAAATATATATATAAATTGAAAATAAACTTTTTTTCGAGATACATTCCGTGACAAGATTT 180
* *********************************
consensus_1168#0 TTTCTTTCATATCGAAATATCGTGATAATCAACTTTTTAACTTTCAAATTGTTTTCAATC 105
consensus_1168#1 TTTCTTTCATATCGAAATATCGGGATAATCAACTTTTTAACTTTCAAATTNNNTTCAATC 240
********************** *************************** *******
consensus_1168#0 AATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAA 165
consensus_1168#1 AATTTTTCATTTCGAAATTATTTCAGTCGTTGCCAAGAACTTTAGACTCCTGGTTAACAA 300
************************************************************
consensus_1168#0 TTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTGTCACGTACCTACG 225
consensus_1168#1 TTCCATTTACAAAAACCTTCAATTATTTAAAATTCTCTTCTTTCGTNTCACGTACCTACG 360
********************************************** *************
consensus_1168#0 CTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATT 285
consensus_1168#1 CTTCTTTTCATCTCTTTCGAGAAAGCTTTTACACAACACAATTATTATTCCAAGCTAATT 420
************************************************************
consensus_1168#0 TCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTCCATCGCTGATCAC 345
consensus_1168#1 TCAATCTATCCAAAAAAAGACTGAATCAAAAGATATCGCAGTCGTTC------------- 467
***********************************************
consensus_1168#0 CCGCTGTGTATCACGCATCCCCACAGCTATATATATATGTGTCCAACACACTTGTAGCTT 405
consensus_1168#1 ------------------------------------------------------------
consensus_1168#0 TCGCATACAATTTCTTCCCGTAATTTTCCGATCAACAATCTGTGCATATATATATCGCGC 465
consensus_1168#1 ------------------------------------------------------------
consensus_1168#0 ACACATGGTTTGCTTTCAGCCTTGGAAAAAAAAAAAAAAAAA 507
consensus_1168#1 ------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |