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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1221#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 564 fasta sequence
[ACACTCGCTCTTCTCCATCTCTTGTTGTTTAAAAATCCTCGTCGCGAAGAGTATGATAAATGCCGAAGAGTGAAAACGATCGTTAAATAATTTTTTCTCGAATTATCAATCTCCCCAAGAATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTATGTACATTTGAAATTCATATTTTTGTTTTTTTTTTCTCTCCTCTCTCTTTTTTATATATACATATATATATATTGAGACGTGTTATCGATCTACTTTTCTTTTCTGCTTTTTAGACGTATACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAAAGCGAGATGACGGGTGCACATTCCATGAATATAATTATACATAACTTATATAAAATAACGAATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAATGAATAATATATCTAATAAAGTTTGAAAGCTTACGAATAGACTCGGTTCATCATTATCATATATCGTGATTTTTATGTCATGTTCAATAAATGAGTTTTAAAA]
[+] EMBL BI515464 [ACACTCGCTCTTCTCCATCTCTTGTTGTTTAAAAATCCTCGTCGCGAAGAGTATGATAAATGCCGAAGAGTGAAAACGATCGTTAAATAATTTTTTCTCGAATTATCAATCTCCCCAAGAATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTATGTACATTTGAAATTCATATTTTTGTTTTTTTTTTCTCTCCTCTCTCTTTTTTATATATACATATATATATATTGAGACGTGTTATCGATCTACTTTTCTTTTCTGCTTTTTAGACGTATACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAAAGCGAGATGACGGGTGCACATTCCATGAATATAATTATACATAACTTATATAAAATAACGAATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAATGAATAATATATCTAATAAAGTTTGAAAGC ]
[-] EMBL BI516098 [ CGAAGAGTATGATAAATGCCGAAGAGTGAAAACGATCGTTAAATAATTTTTTCTCGAATTATCAATCTCCCCAAGAATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTATGTACATTTGAAATTCATATTTTTGTTTTTTTTTTCTCTCCTCTCTCTTTTTTATATATACATATATATATATTGAGACGTGTTATCGATCTACTTTTCTTTTCTGCTTTTTAGACGTATACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAAAGCGAGATGACGGGTGCACATTCCATGAATATAATTATACATAACTTATATAAAATAACGAATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAATGAATAATATATCTAATAAAGTTTGAAAGCTTACGAATAGACTCGGTTCATCATTATCATATATCGTGATTTTTATGTCATGTTCAATAAATGAGTTTTAAAA]
consensusID : consensus_1221#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[GTGAAAACGATCGTTAAATAATTTTTTTCTCGAATTATCAATCTCCCCAAGAATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTATGAACATTTGAAATTCATATTTTGGTTTTTTTTTTCTCTCCTCTCTCTTTTGGAGAGAAATATATATATATATATATATATATATATATATTGAGACGTGTTATCGATCAACTTTTCTTTTCTGCTTTTTAGACGTAAACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAAAGCGAGATGACGGGTGCACATTCCATGAATATAATTAAACATAACTTATATAAAATAACGAATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAACGAATAATATATCTAATAAAGTTTGAAAGCTTACGAATAGACTCGGTTCATCATTATCATATATCGTGATTTTTATGTCATGTTCAATAAATGAGTTTTAAAATAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL BE844276 [GTGAAAACGATCGTTAAATAATTTTTTTCTCGAATTATCAATCTCCCCAAGAATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTATGAACATTTGAAATTCATATTTTGGTTTTTTTTTTCTCTCCTCTCTCTTTTGGAGAGAAATATATATATATATATATATATATATATATATTGAGACGTGTTATCGATCAACTTTTCTTTTCTGCTTTTTAGACGTAAACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAAAGCGAGATGACGGGTGCACATTCCATGAATATAATTAAACATAACTTATATAAAATAACGAATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAACGAATAATATATCTAATAAAGTTTGAAAGCTTACGAATAGACTCGGTTCATCATTATCATATATCGTGATTTTTATGTCATGTTCAATAAATGAGTTTTAAAATAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1221#0 ACACTCGCTCTTCTCCATCTCTTGTTGTTTAAAAATCCTCGTCGCGAAGAGTATGATAAA 60
consensus_1221#1 ------------------------------------------------------------
consensus_1221#0 TGCCGAAGAGTGAAAACGATCGTTAAATAATTTTTT-CTCGAATTATCAATCTCCCCAAG 119
consensus_1221#1 ---------GTGAAAACGATCGTTAAATAATTTTTTTCTCGAATTATCAATCTCCCCAAG 51
*************************** ***********************
consensus_1221#0 AATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTAT 179
consensus_1221#1 AATCGAACGCGGAAAGAAGAGAAAACGTACGTGTACAACGTGTAATATTGTACGCGGTAT 111
************************************************************
consensus_1221#0 GTACATTTGAAATTCATATTTTTGTTTTTTTTTTCTCTCCTCTCTCTTTTT--------- 230
consensus_1221#1 GAACATTTGAAATTCATATTTTGGTTTTTTTTTTCTCTCCTCTCTCTTTTGGAGAGAAAT 171
* ******************** ***************************
consensus_1221#0 ---------TATATATACATATATATATATTGAGACGTGTTATCGATCTACTTTTCTTTT 281
consensus_1221#1 ATATATATATATATATATATATATATATATTGAGACGTGTTATCGATCAACTTTTCTTTT 231
******** ****************************** ***********
consensus_1221#0 CTGCTTTTTAGACGTATACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAA 341
consensus_1221#1 CTGCTTTTTAGACGTAAACGTCTACCGCGTATATGGAATAATGTACAAAATAGGAAAGAA 291
**************** *******************************************
consensus_1221#0 AGCGAGATGACGGGTGCACATTCCATGAATATAATTATACATAACTTATATAAAATAACG 401
consensus_1221#1 AGCGAGATGACGGGTGCACATTCCATGAATATAATTAAACATAACTTATATAAAATAACG 351
************************************* **********************
consensus_1221#0 AATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAA 461
consensus_1221#1 AATCTGTTAGCGTTTGTTAAGAGCATCCGAGTAAGATATATTACACGCAAAGATAACAAA 411
************************************************************
consensus_1221#0 TGAATAATATATCTAATAAAGTTTGAAAGCTTACGAATAGACTCGGTTCATCATTATCAT 521
consensus_1221#1 CGAATAATATATCTAATAAAGTTTGAAAGCTTACGAATAGACTCGGTTCATCATTATCAT 471
***********************************************************
consensus_1221#0 ATATCGTGATTTTTATGTCATGTTCAATAAATGAGTTTTAAAA----------------- 564
consensus_1221#1 ATATCGTGATTTTTATGTCATGTTCAATAAATGAGTTTTAAAATAAAAAAAAAAAAAAAA 531
*******************************************
consensus_1221#0 -----
consensus_1221#1 AAAAA 536
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |