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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[CGCGAAAAGTACGCGAGACTTGGGCAGTGACATCAATCAGGAGGAATATAGTCAACGTAGACGTCTATCTACTCCAAGCGACAGTTCTAGTCCTCCTAGAACAATGAGACTTTTTAAATCTACAGGTACATTGACTAGAGAAGAGGAATCCTTTTGCGAATCAAATAACACTCTCACTAAAAAAAATCAAGGACAGGAAGTTGAGAGAAAGGGTTGGTTTAAATCTCTATCTAGGAAGAATAAATCGAATATCAAAATAATGGATAAGAAACCTAGAATACCAGGAAGTGAAATTTTAACTACTGGAACTGATGAAGAAGCTTCGTCCGTACCTGAACGAGTTTTTGTACAAAAGAATTTACGTTTTTTTGGGGACACCGATCAGGAATCAGTTTCATCTAATAGAGATCGCAGCCGTTACAATTTGGGTATTCTATCAACATCTCGGAAACCATCGAGACTTACTGAAAGTGCATTGTCTTCCGNTGAAAGTACAACAGGAGATAGCAGTCAACAAAGTCAGAATTCTCAG]
[+] EMBL BI507886 [CGCGAAAAGTACGCGAGACTTGGGCAGTGACATCAATCAGGAGGAATATAGTCAACGTAGACGTCTATCTACTCCAAGCGACAGTTCTAGTCCTCCTAGAACAATGAGACTTTTTAAATCTACAGGTACATTGACTAGAGAAGAGGAATCCTTTTGCGAATCAAATAACACTCTCACTAAAAAAAATCAAGGACAGGAAGTTGAGAGAAAGGGTTGGTTTAAATCTCTATCTAGGAAGAATAAATCGAATATCAAAATAATGGATAAGAAACCTAGAATACCAGGAAGTGAAATTTTAACTACTGGAACTGATGAAGAAGCTTCGTCCGTACCTGAACGAGTTTTTGTACAAAAGAATTTACGTTTTTTTGGGGACACCGATCAGGAATCAGTTTCATCTAATAGAGATCGCAGCCGTTACAATTTGGGTATTCTATCAACATCTCGGAAACCATCGAGACTTACTGAAAGTGCATTGTCTTCCGNTGAAAGTACAACAGGAGATAGCAGTCAACAAAGTCAGAATTCTCAG]
consensusID : consensus_1243#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence
[AGAAGAGGAATCCTTTTGCGAATCAAATAACACTCTCACTAAAAAAAATCAAGGACAGGAAGTTGAGAGAAAGGGTTGGTTTAAATCTCTATCTAGGAAGAATAAATCGAATATCAAAATAATGGATAAGAAACCTAGAATACCAGGAAGTGAAATTTTAACTACTGGAACTGATGAAGAAGCTTCGTCCGTACCTGAACGAGTTTTTGTACAAAAGAATTTACGTTTTTTTGGGGACACCGATCAGGAATCAGTTTCATCTAATAGAGATCGCAGAAATAAACGAGATGATCATACCTGTTCAGGACATGATGTTATGAATTCCAGCCGTTACAATTTGGGTATTCTATCAACATCTCGGAAACCATCGAGACTTACTGAAAGTGCATTGTCTTCCGGTGAAAGTACAACAGGAGATAGCAGTCAACAAAGTCAGAATTCTCAGAGATCACAGAGATCTGTTGTAT]
[+] EMBL BI514407 [AGAAGAGGAATCCTTTTGCGAATCAAATAACACTCTCACTAAAAAAAATCAAGGACAGGAAGTTGAGAGAAAGGGTTGGTTTAAATCTCTATCTAGGAAGAATAAATCGAATATCAAAATAATGGATAAGAAACCTAGAATACCAGGAAGTGAAATTTTAACTACTGGAACTGATGAAGAAGCTTCGTCCGTACCTGAACGAGTTTTTGTACAAAAGAATTTACGTTTTTTTGGGGACACCGATCAGGAATCAGTTTCATCTAATAGAGATCGCAGAAATAAACGAGATGATCATACCTGTTCAGGACATGATGTTATGAATTCCAGCCGTTACAATTTGGGTATTCTATCAACATCTCGGAAACCATCGAGACTTACTGAAAGTGCATTGTCTTCCGGTGAAAGTACAACAGGAGATAGCAGTCAACAAAGTCAGAATTCTCAGAGATCACAGAGATCTGTTGTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1243#0 CGCGAAAAGTACGCGAGACTTGGGCAGTGACATCAATCAGGAGGAATATAGTCAACGTAG 60
consensus_1243#1 ------------------------------------------------------------
consensus_1243#0 ACGTCTATCTACTCCAAGCGACAGTTCTAGTCCTCCTAGAACAATGAGACTTTTTAAATC 120
consensus_1243#1 ------------------------------------------------------------
consensus_1243#0 TACAGGTACATTGACTAGAGAAGAGGAATCCTTTTGCGAATCAAATAACACTCTCACTAA 180
consensus_1243#1 ------------------AGAAGAGGAATCCTTTTGCGAATCAAATAACACTCTCACTAA 42
******************************************
consensus_1243#0 AAAAAATCAAGGACAGGAAGTTGAGAGAAAGGGTTGGTTTAAATCTCTATCTAGGAAGAA 240
consensus_1243#1 AAAAAATCAAGGACAGGAAGTTGAGAGAAAGGGTTGGTTTAAATCTCTATCTAGGAAGAA 102
************************************************************
consensus_1243#0 TAAATCGAATATCAAAATAATGGATAAGAAACCTAGAATACCAGGAAGTGAAATTTTAAC 300
consensus_1243#1 TAAATCGAATATCAAAATAATGGATAAGAAACCTAGAATACCAGGAAGTGAAATTTTAAC 162
************************************************************
consensus_1243#0 TACTGGAACTGATGAAGAAGCTTCGTCCGTACCTGAACGAGTTTTTGTACAAAAGAATTT 360
consensus_1243#1 TACTGGAACTGATGAAGAAGCTTCGTCCGTACCTGAACGAGTTTTTGTACAAAAGAATTT 222
************************************************************
consensus_1243#0 ACGTTTTTTTGGGGACACCGATCAGGAATCAGTTTCATCTAATAGAGATCGCAG------ 414
consensus_1243#1 ACGTTTTTTTGGGGACACCGATCAGGAATCAGTTTCATCTAATAGAGATCGCAGAAATAA 282
******************************************************
consensus_1243#0 ---------------------------------------------CCGTTACAATTTGGG 429
consensus_1243#1 ACGAGATGATCATACCTGTTCAGGACATGATGTTATGAATTCCAGCCGTTACAATTTGGG 342
***************
consensus_1243#0 TATTCTATCAACATCTCGGAAACCATCGAGACTTACTGAAAGTGCATTGTCTTCCGNTGA 489
consensus_1243#1 TATTCTATCAACATCTCGGAAACCATCGAGACTTACTGAAAGTGCATTGTCTTCCGGTGA 402
******************************************************** ***
consensus_1243#0 AAGTACAACAGGAGATAGCAGTCAACAAAGTCAGAATTCTCAG----------------- 532
consensus_1243#1 AAGTACAACAGGAGATAGCAGTCAACAAAGTCAGAATTCTCAGAGATCACAGAGATCTGT 462
*******************************************
consensus_1243#0 -----
consensus_1243#1 TGTAT 467
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |