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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1316#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[TCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAACTGAAAAAATCATATTTAAAAAAAATATTTTATGATTGCAATTCTTCGTAAACTATATTACACATACCGATACTCTCATGATTATTTATTTATCTATATCCATATAGAAATCAAATGTATAATATTAAATAAATAGATATTTTAATGGATAATATTAGAAGTATATAAAAAGAAAACTTACAGGCCAGTTTTACTTCGCCCACAGCGTAGGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCNACCAGCGGGAACTCTAT]
[+] EMBL BI507295 [TCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAACTGAAAAAATCATATTTAAAAAAAATATTTTATGATTGCAATTCTTCGTAAACTATATTACACATACCGATACTCTCATGATTATTTATTTATCTATATCCATATAGAAATCAAATGTATAATATTAAATAAATAGATATTTTAATGGATAATATTAGAAGTATATAAAAAGAAAACTTACAGGCCAGTTTTACTTCGCCCACAGCGTAGGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCNACCAGCGGGAACTCTAT]
consensusID : consensus_1316#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence
[CGTCTAAGTAAATAGTCATTACGAAAGTCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAAAGGCCAGTTTTACTTCGCCCACAGCGTAAGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCCACCAGCGGGAACTCTATTAATCTCGATTTCGCGACCATCATCTCCTCTTATGGTGATCCTAACGATACCATCCTCGACAAAATACATTCCATCGGCTGAATCGCCTTGTTTGATGATCTGA]
[+] EMBL BI510784 [CGTCTAAGTAAATAGTCATTACGAAAGTCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAAAGGCCAGTTTTACTTCGCCCACAGCGTAAGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCCACCAGCGGGAACTCTATTAATCTCGATTTCGCGACCATCATCTCCTCTTATGGTGATCCTAACGATACCATCCTCGACAAAATACATTCCATCGGCTGAATCGCCTTGTTTGATGATCTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1316#0 ---------------------------TCGACTCGAGATGATACTTGAAAACACGCGGAT 33
consensus_1316#1 CGTCTAAGTAAATAGTCATTACGAAAGTCGACTCGAGATGATACTTGAAAACACGCGGAT 60
*********************************
consensus_1316#0 GAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATC 93
consensus_1316#1 GAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATC 120
************************************************************
consensus_1316#0 ATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGA 153
consensus_1316#1 ATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGA 180
************************************************************
consensus_1316#0 AATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACG 213
consensus_1316#1 AATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACG 240
************************************************************
consensus_1316#0 CTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAACTGA 273
consensus_1316#1 CTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAA--AG 298
********************************************************
consensus_1316#0 AAAAATCATATTTAAAAAAAATATTTTATGATTGCAATTCTTCGTAAACTATATTACACA 333
consensus_1316#1 GCCAGTTTTACTTCGCCCACAGCGTAAGCCGAAGCAGCGCGAGGTTTA-TGTGTCACTAG 357
* * ** ** * * * *** * ** * * * * **
consensus_1316#0 TACCGATACTCTCATGATTATTTATTTAT-----CTATATCCATATAGAAATCAAATGTA 388
consensus_1316#1 CGCCAAT--TCGCCTAAGTATCCACCAGCGGGAACTCTATTAATCTCGATTTCGCGACCA 415
** ** ** * * * *** * ** *** ** * ** ** *
consensus_1316#0 TAATATTAAATAAATAGATATTTTAATGGATAATATTAGAAGTATATAAAAAGAAAACTT 448
consensus_1316#1 TCATCTCCTCTTA-TGGTGATCCTAACG-ATACCATCCTCGAC-----AAAATACATTCC 468
* ** * * * * * ** *** * *** ** **** * *
consensus_1316#0 ACAGGCCAGTTTTACTTCGCCCACAGCGTAGGCCGAAGCAGCGCGAGGTTTATGTGTCAC 508
consensus_1316#1 ATCGGCTGAATCGCCTTGTTTGATGATCTGA----------------------------- 499
* *** * *** * *
consensus_1316#0 TAGCGCCAATTCGCCTAAGTATCNACCAGCGGGAACTCTAT 549
consensus_1316#1 -----------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |