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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1360#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[TGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTCTAAAATAGAATTTATTTAACATATATATATTTTAATAAATATAATAACATAAGATGTGTACATATAATAATATCTATATGTATAAGATTTGTATGAACCCGCAAAAGCCAGACAGTGCAATGAATATAACAATTCTGGGTGAAGCAATTCATTTATTTTAAGACATTCTGAAATCAAACATGAAATGAAATATCATATCTAAGGAACAGATGTCTATAAAATTTTTTCATTGTGTAATTAATCTTTGTGATTAAATTGAATGATATAATTGTGATATAAATCGAGATAAAAGTTTAAGTTTTGGAACTATACTTACTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGA]
[+] EMBL BI511639 [TGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTCTAAAATAGAATTTATTTAACATATATATATTTTAATAAATATAATAACATAAGATGTGTACATATAATAATATCTATATGTATAAGATTTGTATGAACCCGCAAAAGCCAGACAGTGCAATGAATATAACAATTCTGGGTGAAGCAATTCATTTATTTTAAGACATTCTGAAATCAAACATGAAATGAAATATCATATCTAAGGAACAGATGTCTATAAAATTTTTTCATTGTGTAATTAATCTTTGTGATTAAATTGAATGATATAATTGTGATATAAATCGAGATAAAAGTTTAAGTTTTGGAACTATACTTACTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGA]
consensusID : consensus_1360#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 471 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATAAAGTATCTTTTTATTTATACAATGCTAAAATTTAACGTTTTCCTCCAACACGTGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGAGATGCACCTACAATAGCACGTTGAAATTTTTGAGTACGTCTTGTTCTTTTTTTTGCTTGTTCTTCTTCTTGTCCTTTTTTATGTTTTCGTCTATATAATACAGTCCACGTGACTTTTCTTGGATTACGTCTCATTAAATGTGCGGATTCACATTTTGAATTCAAGAAAGTGAATGTTTTTCCATCCACTTTTACCATG]
[-] EMBL BI506903 [TTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATAAAGTATCTTTTTATTTATACAATGCTAAAATTTAACGTTTTCCTCCAACACGTGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGAGATGCACCTACAATAGCACGTTGAAATTTTTGAGTACGTCTTGTTCTTTTTTTTGCTTGTTCTTCTTCTTGTCCTTTTTTATGTTTTCGTCTATATAATACAGTCCACGTGACTTTTCTTGGATTACGTCTCATTAAATGTGCGGATTCACATTTTGAATTCAAGAAAGTGAATGTTTTTCCATCCACTTTTACCATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1360#0 ------------------------------------------------------------
consensus_1360#1 TTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATAAAGTATCTTTTTATTTATACAATGCT 60
consensus_1360#0 --------------------------TGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTA 34
consensus_1360#1 AAAATTTAACGTTTTCCTCCAACACGTGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTA 120
**********************************
consensus_1360#0 TGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCT 94
consensus_1360#1 TGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCT 180
************************************************************
consensus_1360#0 TTCTTTTGTTCCTTTGCAGCTCTAAAATAGAATTTATTTAACATATATATATTTTAATAA 154
consensus_1360#1 TTCTTTTGTTCCTTTGCAGCTTTA----ATAGCTTGTTC----TCTCTGTGCTTTACGAA 232
********************* ** * * ** ** * * * * **** **
consensus_1360#0 ATA-TAATAACATAAGATGTGTACATATAATAATATCTATATGTATAAGATTTGTATGAA 213
consensus_1360#1 TTTCTGGTTTCATATTACGTTT---TGCTAAAATATCTGTAAGAGATGCACCTACAATAG 289
* * * **** * ** * * * ******* ** * * * * *
consensus_1360#0 CCCGCAAAAGCCAGACAGTGCAATGAATATAACAATTCTGGGTGAAGCAATTCATTTATT 273
consensus_1360#1 CACGTTGAAATTTTTGAGTACGTCTTGT-TCTTTTTTTTGCTTGTTCTTCTTCTTGTCCT 348
* ** ** *** * * * ** ** ** *** * * *
consensus_1360#0 TTAAGACATTCTGAAATCAAACATGAAATGAA-ATATCATATCTAAGGAACAGATGTCTA 332
consensus_1360#1 TTTTTATGTTTTCGTCTATATAATACAGTCCACGTGACTTTTCTT-GGATTACGTCTC-A 406
** * ** * * * ** * * * * * * *** *** * * ** *
consensus_1360#0 TAAAATTTTTTCATTGTGTAATTAATCTTTGTGATTAAATTGAATGATATAATTGTGATA 392
consensus_1360#1 TTAAATGTGCGGATT-CACATTTTGAATTCAAGA---AAGTGAATGTTTTTCCATCCACT 462
* **** * *** * ** ** ** ** ****** * * *
consensus_1360#0 TAAATCGAGATAAAAGTTTAAGTTTTGGAACTATACTTACTTAATAGCTTGTTCTCTCTG 452
consensus_1360#1 TTTACCATG--------------------------------------------------- 471
* * * *
consensus_1360#0 TGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGA 504
consensus_1360#1 ----------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |