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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 1387 cluster # 1387       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1387#0 length = 488 sequences # 1  
 consensus_1387#1 length = 279 sequences # 1  
consensusID : consensus_1387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence 
                              [GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCCGTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAAAGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAGGAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGAGAGAAAAA]

[+] EMBL BI507930             [GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCCGTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAAAGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAGGAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGAGAGAAAAA]




>consensus_1387#0
GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCC
GTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAA
AGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAG
GAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAG
TTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGC
GAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTG
CGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCA
AAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGA
GAGAAAAA

consensusID : consensus_1387#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 279
fasta sequence 
                              [TTTTTTTTTTTCATTTCATCTAAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTT]

[-] EMBL BI506706             [TTTTTTTTTTTCATTTCATCTAAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTT]




>consensus_1387#1
TTTTTTTTTTTCATTTCATCTAAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATC
GGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTAT
GCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTAC
CAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATT
GTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1387#0      GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCC 60
consensus_1387#1      ------------------------------------------------------------
                                                                                  

consensus_1387#0      GTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAA 120
consensus_1387#1      ------------------------------------------------------------
                                                                                  

consensus_1387#0      AGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAG 180
consensus_1387#1      ---------------------------------------TTTTTTTTTTTCATTTCATCT 21
                                                                         *    *   

consensus_1387#0      GAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAG 240
consensus_1387#1      AAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAG 81
                       ***  ******************************************************

consensus_1387#0      TTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGC 300
consensus_1387#1      TTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGC 141
                      ************************************************************

consensus_1387#0      GAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTG 360
consensus_1387#1      GAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTG 201
                      ************************************************************

consensus_1387#0      CGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCA 420
consensus_1387#1      CGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCA 261
                      ************************************************************

consensus_1387#0      AAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGA 480
consensus_1387#1      AAATTACTTAGGACATTT------------------------------------------ 279
                      ******************                                          

consensus_1387#0      GAGAAAAA 488
consensus_1387#1      --------


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)