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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 1612 cluster # 1612       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1612#0 length = 515 sequences # 1  
 consensus_1612#1 length = 194 sequences # 1  
consensusID : consensus_1612#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 515
fasta sequence 
                              [TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCTCTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGGTTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTCGACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACACACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCCCTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGAGAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG]

[+] EMBL BI516153             [TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCTCTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGGTTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTCGACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACACACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCCCTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGAGAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG]




>consensus_1612#0
TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCT
CTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGG
TTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTC
GACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACA
CACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCC
CTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGA
GAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACT
ATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTG
TCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG

consensusID : consensus_1612#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 194
fasta sequence 
                              [GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGGAAAAAAGAAGAAAAAGAAAAAAAAAAA]

[+] EMBL BI505640             [GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGGAAAAAAGAAGAAAAAGAAAAAAAAAAA]




>consensus_1612#1
GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGAT
TCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTC
TCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGGAAAAAAGAAGAAA
AAGAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1612#0      TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCT 60
consensus_1612#1      ------------------------------------------------------------
                                                                                  

consensus_1612#0      CTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGG 120
consensus_1612#1      ------------------------------------------------------------
                                                                                  

consensus_1612#0      TTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTC 180
consensus_1612#1      ------------------------------------------------------------
                                                                                  

consensus_1612#0      GACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACA 240
consensus_1612#1      ------------------------------------------------------------
                                                                                  

consensus_1612#0      CACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCC 300
consensus_1612#1      ------------------------------------------------------------
                                                                                  

consensus_1612#0      CTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGA 360
consensus_1612#1      ------------------------------------------------------------
                                                                                  

consensus_1612#0      GAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACT 420
consensus_1612#1      -------------GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACT 47
                                   *      *    ** ********************************

consensus_1612#0      ATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTG 480
consensus_1612#1      ATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTG 107
                      ************************************************************

consensus_1612#0      TCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG------------------------- 515
consensus_1612#1      TCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGG 167
                      ***********************************                         

consensus_1612#0      ---------------------------
consensus_1612#1      AAAAAAGAAGAAAAAGAAAAAAAAAAA 194


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)