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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence
[CAAGAGGACACCCAGTGTCGACGATCGCAATGAATCGAAAGGAAGTGAGAGGGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTACAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATACCCTCCCTCCTCCACTTTTTCTAACTTACCACCACGCGTTCCCCCCACTCCCATTACTCCCATCTCTTCTTCCCACCCACTCCCCCACCTCCACTCGGCGGTTACCTACCGAGTGGTTCGACACTTCACCTTCCTTCCTTCCTTTTTCTTTTCCTTCGTTACTCGTGACCTTAGTATCNNNTTATTTATTTAGAGTTCGAGCGAGTATAAACTTACCGCCGGATGTGGAAGGAATTAATTTAGGTATTCGCTCTTTTCACGT]
[+] EMBL BI515637 [CAAGAGGACACCCAGTGTCGACGATCGCAATGAATCGAAAGGAAGTGAGAGGGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTACAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATACCCTCCCTCCTCCACTTTTTCTAACTTACCACCACGCGTTCCCCCCACTCCCATTACTCCCATCTCTTCTTCCCACCCACTCCCCCACCTCCACTCGGCGGTTACCTACCGAGTGGTTCGACACTTCACCTTCCTTCCTTCCTTTTTCTTTTCCTTCGTTACTCGTGACCTTAGTATCNNNTTATTTATTTAGAGTTCGAGCGAGTATAAACTTACCGCCGGATGTGGAAGGAATTAATTTAGGTATTCGCTCTTTTCACGT]
consensusID : consensus_1629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence
[GAGAGAGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTATAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATAAATATATATATATATATATACATTACGTACGTGTACATGTATNNNNAGAGAGAGAGAGAGAGAGAGATCANNATGAAAGAAATTTTAATGAAAAAAAAATTCAAAAATAATATTAGAAATTTTTAGAAAATGGANAATGTTCTGATAACATGACAATTATCTGATAGAAATGATTTATTTGCAGAACTAAAATTTTCGGATGAAAGAAGAGGGAGAAAATACAAGAAAAATATA]
[+] EMBL BI515012 [GAGAGAGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTATAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATAAATATATATATATATATATACATTACGTACGTGTACATGTATNNNNAGAGAGAGAGAGAGAGAGAGATCANNATGAAAGAAATTTTAATGAAAAAAAAATTCAAAAATAATATTAGAAATTTTTAGAAAATGGANAATGTTCTGATAACATGACAATTATCTGATAGAAATGATTTATTTGCAGAACTAAAATTTTCGGATGAAAGAAGAGGGAGAAAATACAAGAAAAATATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1629#0 CAAGAGGACACCCAGTGTCGACGATCGCAATGAATCGAAAGGAAGTGAGAGGGAAACGGG 60
consensus_1629#1 ----------------------------------------------GAGAGAGAAACGGG 14
***** ********
consensus_1629#0 GCATCCTCGACGATCGTAGAAGATGCCTCGGTTTACAAATTTTCAGCGTAATCTCGTGGC 120
consensus_1629#1 GCATCCTCGACGATCGTAGAAGATGCCTCGGTTTATAAATTTTCAGCGTAATCTCGTGGC 74
*********************************** ************************
consensus_1629#0 ACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATA 180
consensus_1629#1 ACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATA 134
************************************************************
consensus_1629#0 CCCTCCCTCCTCCACTTTTTC-TAACTTACCACCACGCGTTCCCCCCACTCCCATTACTC 239
consensus_1629#1 AATATATATATATATATATACATTACGTACGTGTACATGTATNNNNAGAGAGAGAGAGAG 194
* * * * * * ** *** ** ** *
consensus_1629#0 CCATCTCTTCTTCCCACCCACTCCCCCACCTCCACTCGGCGGTTACCTACCGAGTGGTTC 299
consensus_1629#1 AGAGAGATCANNATGAAAGA-------AATTTTAATGAAAAAAAAATTCAAAAATAATAT 247
* * * * * * * * * * * * *
consensus_1629#0 GACACTTCACCTTCCTTCCTTCCTTTTTCTTTTCCTTCGTTACTCGTGACCTTAGTATCN 359
consensus_1629#1 TAGAAATTTTTAGAAAATGGANAATGTTCTGATAACATGACAATTAT----CTGATAG-A 302
* * * * **** * * * * * * **
consensus_1629#0 NNTTATTTATTTAGAGTTCGAGCGAGTATAAACTTACCGCCGGATGTGGAAGGAATTAAT 419
consensus_1629#1 AATGATTTATTTGCAG--------AACTAAAATTTTCGGATGAAAGAAGAGGGAGAAAAT 354
* ******** ** * *** ** * * * * * ** *** ***
consensus_1629#0 TTAGGTATTCGCTCTTTTCACGT 442
consensus_1629#1 ACAAGAAAAATATA--------- 368
* * * *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |