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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_184#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 606 fasta sequence
[CGATGACCTGATCTTTCGAAAGTTCGAGAGAGTAATTATTTAGACACGAGATTTTTAATTTCAAGATTTTTCAAAATATATTTTATATTTTTTTATTATATTATGTAATTAATATCGATATTAAAATTCTAAATGTAAAATTGTTATCTTATCGAAGGTAAAAATTTTGTCAGATCATCGAGAAACTCTCCACGTGTAATTTATTTCTATCTCTCTCTGTATATCCTTATATATACGTATATACATATAAATATTCTTTCTAATCGTAAGCCACCAGCAGCAAGAAGCACTTAAGTGAAAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATG]
[+] EMBL BI509343 [CGATGACCTGATCTTTCGAAAGTTCGAGAGAGTAATTATTTAGACACGAGATTTTTAATTTCAAGATTTTTCAAAATATATTTTATATTTTTTTATTATATTATGTAATTAATATCGATATTAAAATTCTAAATGTAAAATTGTTATCTTATCGAAGGTAAAAATTTTGTCAGATCATCGAGAAACTCTCCACGTGTAATTTATTTCTATCTCTCTCTGTATATCCTTATATATACGTATATACATATAAATATTCTTTCTAATCGTAAGCCACCAGCAGCAAGAAGCACTTAAGTGAAAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATG]
consensusID : consensus_184#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 523 fasta sequence
[GTTCCTCTCCAACTTCTTTTCGTTTCATTTTCGGTAAATTGTGAATAATGGACATAATCGACCGGAATGTATATCCACCGGATCACAAAACGGTGATCAAACTTCGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATGGCGTGCTCACCGTCGAGGCTCCGCTTCCGGCGATTGGCACAGGCGAGAAGCTCATCCCAATTGCGCATCAGTAGATCGCCCAATCGACCAGTCGAACACACGAAAAAAACGA]
[-] EMBL BI508889 [GTTCCTCTCCAACTTCTTTTCGTTTCATTTTCGGTAAATTGTGAATAATGGACATAATCGACCGGAATGTATATCCACCGGATCACAAAACGGTGATCAAACTTCGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATGGCGTGCTCACCGTCGAGGCTCCGCTTCCGGCGATTGGCACAGGCGAGAAGCTCATCCCAATTGCGCATCAGTAGATCGCCCAATCGACCAGTCGAACACACGAAAAAAACGA]
[-] EMBL BI507323 [ TAATGGACATAATCGACCGGAATGTATATCCACCGGATCACAAAACGGTGATCAAACTTCGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATGGCGTGCTCACCGTCGAGGCTCCGCTTCCGGCGATTGGCACAGGCGAGAAGCTCATCCCAATTGCGCATCAGTAGATCGCCCAATCGACCAGTCGAACACACGAAAAAAACGA]
consensusID : consensus_184#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 511 fasta sequence
[TGACTTATAGAAAAATCATGGCTGACAGTGGTATCAAGCGTAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGACACCGAATTTTCCAACATACGGGAACGCTTCGACGCCGAGATGAGAAAGATGGAGGACGAGATGTCACGATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAGTACTACCAGCACCACAACGCNNNNCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGNNAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATGG]
[+] EMBL BI508581 [TGACTTATAGAAAAATCATGGCTGACAGTGGTATCAAGCGTAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGACACCGAATTTTCCAACATACGGGAACGCTTCGACGCCCAGATGAGAAAGATGGAGGACGAGATGTCACGATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAGTACTACCAGCACCACAACGCNNNNCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGNNAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTA ]
[+] EMBL BI506575 [ TAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGACACCGAATTTTCCAACATACGGGAACGCTTCGACGCCGAGATGAGAAAGATGGAGGACGAGATGTCACGATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAGTACTACCAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAAACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGTTGTCAAGACCGTGGACAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAGAGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTCGTTGAGCAAAGATGG]
consensusID : consensus_184#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 400 fasta sequence
[CAAGTGTGACTTATAGAAAAATCATGGCTGACAGTGGTATCAAGCGTAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGACACCGAATTTTCCAACATACGGGAACGCTTCGACGCCGAGATGAGAAAGATGGAGGACGAGATGTCACGATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAGTACTACCAGTCGACATCACACGAGCACCAGCGAACACCGTACCTCGACGACCTCGAAGAGCGAAGGTTGGGACAAGGTCGATCCTGCAGCACCGCCAACGCGGTCCGCGTTCGACAGCTTCAAAAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAA]
[+] EMBL BI510715 [CAAGTGTGACTTATAGAAAAATCATGGCTGACAGTGGTATCAAGCGTAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGACACCGAATTTTCCAACATACGGGAACGCTTCGACGCCGAGATGAGAAAGATGGAGGACGAGATGTCACGATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAGTACTACCAGTCGACATCACACGAGCACCAGCGAACACCGTACCTCGACGACCTCGAAGAGCGAAGGTTGGGACAAGGTCGATCCTGCAGCACCGCCAACGCGGTCCGCGTTCGACAGCTTCAAAAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGCGTGGCTCGACGGGTTGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_184#0 CGATGACCTGATCTTTCGAAAGTTCGAGAGAGTAATTATTTAGACACGAGATTTTTAATT 60
consensus_184#1 ------------------------------------------------------------
consensus_184#2 ------------------------------------------------------------
consensus_184#3 ------------------------------------------------------------
consensus_184#0 TCAAGATTTTTCAAAATATATTTTATATTTTTTTATTATATTATGTAATTAATATCGATA 120
consensus_184#1 ------------------------------------------------------------
consensus_184#2 ---------------------------------TGACTTATAGAAAAATCATGGCTGACA 27
consensus_184#3 ------------------------------------------------------------
consensus_184#0 TTAAAATTCTAAATGTAAAATTGTTATCTTATCGAAGGTAAAAATTTTGTCAGATCATCG 180
consensus_184#1 ------------------------------------------------------------
consensus_184#2 GTGGTAT--CAAGCGTAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGA-CACCG 84
consensus_184#3 ------------------------------------------------------------
consensus_184#0 AGAAACTCTCCACGTGTAATTTATTTCT-ATCTCTCTCTGTATATCCTTATATATAC-GT 238
consensus_184#1 -----------------GTTCCTCTCCA-ACTTCTTTTCGTTTCATTTTCGGTAAATTGT 42
consensus_184#2 AATTTTCCAACATACGGGAACGCTTCGACGCCGAGATGAGAAAGATGGAGGACGAGATGT 144
consensus_184#3 ------------------------CAAGTGTGACTTATAGAAAAATCATGGCTGACAGTG 36
*
consensus_184#0 ATATACATATAAATATTCTTTCTAATCGTA-AGCCACCAG--CAGCAAGAAGCACTTAAG 295
consensus_184#1 GAATA-ATGGACATAATCGACCGGAATGTATATCCACCGGATCACAAAACGGTGATCAAA 101
consensus_184#2 CACGATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAGTACT---- 200
consensus_184#3 GTATCAAGCGTAATATTCCTATCAAGCTCGGTGACTTCAGCGTAATAGACACCGAATTTT 96
* * *
consensus_184#0 TGAAAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGC 355
consensus_184#1 CTTC-GCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGC 160
consensus_184#2 -ACCAGCACCACAACGCNNNNCACTCAAAACAGTTCTCTCAGCCCCCCACACGACTCGGC 259
consensus_184#3 CCAACATACGGGAACGCTTCGACGCCGAGA--------TGAGAAAGATGGAGGACGAGAT 148
** ***** * * * * ** * *** *
consensus_184#0 GTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAA 415
consensus_184#1 GTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAA 220
consensus_184#2 GTGGCTCGACGGGTTGAACAGCCCGCTCATTCAGGACGAAGGGGACAGCAAATGCCTGAA 319
consensus_184#3 GTCAC------GATTCAGAAGCGAATTGATGAATCGCGAAAGCAACAACTTCTTTAAGAG 202
** * * ** * *** * ** * **** * *** * * **
consensus_184#0 -ACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGT-TGTCAA-GACCGTGGA 472
consensus_184#1 -ACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGT-TGTCAA-GACCGTGGA 277
consensus_184#2 -ACTTCGTTTCGACGTCTCCCAGTACACGCCTGAGGAGATCGT-TGTCAA-GACCGTGGA 376
consensus_184#3 TACTACCAGTCGACATCACACGA---GCACCAGCGAACACCGTACCTCGACGACCTCGAA 259
*** * ***** ** * * * ** * * * * *** ** * **** * *
consensus_184#0 CAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAG 532
consensus_184#1 CAACAAACTATTGGTCCATGCAAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAG 337
consensus_184#2 CAACAAACTATTGGTCCATGNNAAACACGAAGAGAAGACAGAGAGTAAATCGGTGTACAG 436
consensus_184#3 GAGCGAAGGTTGGGACAAGGTCGATCCTGCAGCACCGCCAACGCG---GTCCGCGTTCGA 316
* * ** * ** * * * * * * ** * ** * * ** * ** *
consensus_184#0 AGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTC 592
consensus_184#1 AGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTC 397
consensus_184#2 AGAGTACAATCGCGAATTCCTGCTGCCCAAGGGAACCAATCCCGAAAGTATCAAGTCTTC 496
consensus_184#3 CAGCTTCAAAAGCACCACAACGCAGAGCACTCAAAACAGTTCTCTCAGCCCCCCACACGA 376
* *** ** ** * ** ** ** * * ** *
consensus_184#0 GTTGAGCAAAGATG---------------------------------------------- 606
consensus_184#1 GTTGAGCAAAGATGGCGTGCTCACCGTCGAGGCTCCGCTTCCGGCGATTGGCACAGGCGA 457
consensus_184#2 GTTGAGCAAAGATGG--------------------------------------------- 511
consensus_184#3 CTCGGCGTGGCTCGACGGGTTGAA------------------------------------ 400
* * *
consensus_184#0 ------------------------------------------------------------
consensus_184#1 GAAGCTCATCCCAATTGCGCATCAGTAGATCGCCCAATCGACCAGTCGAACACACGAAAA 517
consensus_184#2 ------------------------------------------------------------
consensus_184#3 ------------------------------------------------------------
consensus_184#0 ------
consensus_184#1 AAACGA 523
consensus_184#2 ------
consensus_184#3 ------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |