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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1858#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[AGTTGTCGGGGAAGTATGGAAGAAGAGAAAAAAAAAAGGAGCAAAAAAATAAATAATAATAATAATAATAATATTAATATTAATAATAATAATAATAATAATAATAATAATAATAAAAACATGAATTATAATAGAGTAATGTATTTTATGACGGGTTTTAATAGCGGTATTAATACGATATTAATAGCGATATTTAGCCGTAACTGATAATAAAGACACTATTTGAATGTGAAATTATTAGACGATAATGAGACACAGGATGTAACACAGTGGTAATAAACTGTATGGTAATAAACTACTATATAAGGTTTAAACGATTAGGCATTAAATCGTCGAAATGGGAAAGAAAATGGACGAGAACAAGTAAGATATTAAGATAATGATGGGGGAAAAAAAAAAAAAAAGAAAACGAATATCGAAACAATGAAAATCTATGGACTTTTTTTACCAAAGAATTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTGTATACGTACGATGGGATT]
[+] EMBL BI504805 [AGTTGTCGGGGAAGTATGGAAGAAGAGAAAAAAAAAAGGAGCAAAAAAATAAATAATAATAATAATAATAATATTAATATTAATAATAATAATAATAATAATAATAATAATAATAAAAACATGAATTATAATAGAGTAATGTATTTTATGACGGGTTTTAATAGCGGTATTAATACGATATTAATAGCGATATTTAGCCGTAACTGATAATAAAGACACTATTTGAATGTGAAATTATTAGACGATAATGAGACACAGGATGTAACACAGTGGTAATAAACTGTATGGTAATAAACTACTATATAAGGTTTAAACGATTAGGCATTAAATCGTCGAAATGGGAAAGAAAATGGACGAGAACAAGTAAGATATTAAGATAATGATGGGGGAAAAAAAAAAAAAAAGAAAACGAATATCGAAACAATGAAAATCTATGGACTTTTTTTACCAAAGAATTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTGTATACGTACGATGGGATT]
consensusID : consensus_1858#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence
[TTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTNTATACGTACGATGGGATTAAATCACTTGGAGCGAGAGAATTTCGAAACTTCGATATACGAAATTTAATCCTTGTGCCGATAAAATACGAATAATACTTCAGAGCATCGCACACGCTATTAAGGAAAGAAAAAGGGAAGNACGTTTAATTATAATAAACCCCGATGCAAGATCTAAGGTACTATAAATCTCCAATTTCCTTCTATCTAATAATAAAAAGTCAAAACTCGTCGAGGAGTTTTTTGTTAGCAAGGGATTAAACTTCGATGATTCTCGCCAAATGATTTTTGATGCTTCCAGTATATTATGGAACGATTCNNNGATAAAATACTGTCGAATTTACGGGAACGTTCTCCGCTAAAAAAGAACAAATTTAAAATGTAAATGTTAAATGTAATATC]
[+] EMBL BI515882 [TTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTNTATACGTACGATGGGATTAAATCACTTGGAGCGAGAGAATTTCGAAACTTCGATATACGAAATTTAATCCTTGTGCCGATAAAATACGAATAATACTTCAGAGCATCGCACACGCTATTAAGGAAAGAAAAAGGGAAGNACGTTTAATTATAATAAACCCCGATGCAAGATCTAAGGTACTATAAATCTCCAATTTCCTTCTATCTAATAATAAAAAGTCAAAACTCGTCGAGGAGTTTTTTGTTAGCAAGGGATTAAACTTCGATGATTCTCGCCAAATGATTTTTGATGCTTCCAGTATATTATGGAACGATTCNNNGATAAAATACTGTCGAATTTACGGGAACGTTCTCCGCTAAAAAAGAACAAATTTAAAATGTAAATGTTAAATGTAATATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1858#0 AGTTGTCGGGGAAGTATGGAAGAAGAGAAAAAAAAAAGGAGCAAAAAAATAAATAATAAT 60
consensus_1858#1 ---------------------TTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCAC 39
* *** * ** ** * * * *
consensus_1858#0 AATAATAATAATATTAATATTAATAATAATAATAATA-ATAATAATAATAATAATAAAA- 118
consensus_1858#1 GCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTNTATACGTACGATGGGATTAAATC 99
* * * * * * * ** * * *** * ** * ****
consensus_1858#0 ACATGAATTATAATAGAGTAATGTATTTTATG-ACGGGTTTTAATAGCGGTATTAATACG 177
consensus_1858#1 ACTTGGAGCGAGAGAATTTCGAAACTTCGATATACGAAATTTAATCCTTGTGCCGATAAA 159
** ** * * * * ** ** *** ****** ** ***
consensus_1858#0 ATATTAATAGCGATATTTAGC--CGTAACTGATAATAAAGACACTATTTGAATGTGAAAT 235
consensus_1858#1 ATACGAATAATACTTCAGAGCATCGCACACGCTATTAAGGAAAGAAAAAGGGAAGNACGT 219
*** **** * *** ** * * ** *** ** * * * * *
consensus_1858#0 T--ATTAGACGATAATGAGACACAGGATGTAACACAGTGGTAATAAACTGTATGGTAATA 293
consensus_1858#1 TTAATTATAATAAACCCCGATGCAAGATCTAAGGTACTATAAATCTCCAATTTCCTTCTA 279
* **** * * * ** ** *** *** * * *** * * * * **
consensus_1858#0 AACTACTATATAAGGTTTAAACG-ATTAGGCATTAAATCGTCGAAATGGGAAAGAAAATG 352
consensus_1858#1 TCTAATAATAAAAAGTCAAAACTCGTCGAGGAGTTTTTTGTTAGCAAGGGATTAAACTTC 339
* *** ** ** **** * * * * * ** * **** ** *
consensus_1858#0 GACGAG----AACAAGTAAGATATTAAGATAATGATGGGGGAAAAAAAAAAAAAAAGA-A 407
consensus_1858#1 GATGATTCTCGCCAAATGATTTTTGATGCTTCCAGTATATTATGGAACGATTCNNNGATA 399
** ** *** * * * * * * * * * ** * ** *
consensus_1858#0 AACGAATATCGAAACAATGAAAATCTATGGACTTTTTTTACCAAAGAATTTTTTCACAAA 467
consensus_1858#1 AAATACTGTCGAATTTACGGGAAC-----GTTCTCCGCTAAAAAAGAACAAATTTAAAAT 454
** * * ***** * * ** * * ** ****** ** * **
consensus_1858#0 GAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATT 527
consensus_1858#1 GTAAATGTTAAATGTAATATC--------------------------------------- 475
* * ** *** ** *
consensus_1858#0 CTTGTATACGTACGATGGGATT 549
consensus_1858#1 ----------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |