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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1954#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence
[CTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGGAAATATGCGTGGCAGAGGAAGAGGTCGTGGTGGTTTTAGAAATCAACCCGGTAACGCTGGTGCCAAACCCAAGAATACGCTGAAATTCGATAATGATTATGATTTTGAACAAGCTAATACTGAGTTCGAAGAATTAAGATCTCAATTAGCAAAAACAAAAATTGATTCTGGTGCTGATAATGAAAAGAAGGATGATAGTGGTAATGAAACTGGAGCAGGTGAAGGTGAACCAGAAGAAGAACCAGAGATAGTTCATTATGACAAATCAAAATCGTTCTTTGATAACATCAGTTGCGAAGCAGTGGAGAGAAGTAAAGGACGATTNNAACGTACAGACTGGAGGACAGAGCGCAAATTGAACTCTGAAACATTTGGTGTAGCGTCAACGAGACGCGGT]
[+] EMBL BI504838 [CTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGGAAATATGCGTGGCAGAGGAAGAGGTCGTGGTGGTTTTAGAAATCAACCCGGTAACGCTGGTGCCAAACCCAAGAATACGCTGAAATTCGATAATGATTATGATTTTGAACAAGCTAATACTGAGTTCGAAGAATTAAGATCTCAATTAGCAAAAACAAAAATTGATTCTGGTGCTGATAATGAAAAGAAGGATGATAGTGGTAATGAAACTGGAGCAGGTGAAGGTGAACCAGAAGAAGAACCAGAGATAGTTCATTATGACAAATCAAAATCGTTCTTTGATAACATCAGTTGCGAAGCAGTGGAGAGAAGTAAAGGACGATTNNAACGTACAGACTGGAGGACAGAGCGCAAATTGAACTCTGAAACATTTGGTGTAGCGTCAACGAGACGCGGT]
consensusID : consensus_1954#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 363 fasta sequence
[CCAATCTCTGGAAGATGGTGTATTAGATCTCATTAGTGGAGGTTCACGATCAACAACTCCAACTTCATCTTTATTGACACGAAAAAGTCCAACTATGGATCAAAGTATTCAGGTAGGCCATCAACAACAACAACAACAACAGCAGAGTGGAAATGTTGGCAAGCTTGGTGAAAAGACGAATATAAGAACTATTCAACCTGCTCGACGTGATCACGATAGCCATAGTGGTAATAAAACAGGAGGTACTGTATCACAATATAATGTTGGAAAACGTGATACAATGAAACAAGATGGTCAACTTCAAGGTCAAGGTACTCATGCTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGG]
[+] EMBL BI504524 [CCAATCTCTGGAAGATGGTGTATTAGATCTCATTAGTGGAGGTTCACGATCAACAACTCCAACTTCATCTTTATTGACACGAAAAAGTCCAACTATGGATCAAAGTATTCAGGTAGGCCATCAACAACAACAACAACAACAGCAGAGTGGAAATGTTGGCAAGCTTGGTGAAAAGACGAATATAAGAACTATTCAACCTGCTCGACGTGATCACGATAGCCATAGTGGTAATAAAACAGGAGGTACTGTATCACAATATAATGTTGGAAAACGTGATACAATGAAACAAGATGGTCAACTTCAAGGTCAAGGTACTCATGCTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1954#0 CTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGGAAATATGCGTGGCAGAG 60
consensus_1954#1 ---------------------------------CCAATCTCTGGAAGATG-GTGTATTAG 26
**** * ** *** *** **
consensus_1954#0 GAAGAGGTCGTGGTGGTTTTAGAAATCAACCCGGTAACGCTGGTGCCAAACCCAAGAATA 120
consensus_1954#1 ATCTCATTAGTGGAGGTTCACGA--TCAAC-----AACTCCAACTTCATCTTTATTGACA 79
* **** **** ** ***** *** * ** * * *
consensus_1954#0 CGCTGAAATTCGATAATGATTATGATTTTGAACAAGCTAATACTGAGTTCGAAGAATTAA 180
consensus_1954#1 CGAAAAAGTCCAACTATG-----------GATCAA---AGTATTCAGGTAGGCCA-TCAA 124
** ** * * * *** ** *** * ** * ** * * * * **
consensus_1954#0 GATCTCAATTAGCAAAAACAAAA-ATTGATTCTGGTGCTGATAATGAAAAGAAGGATGAT 239
consensus_1954#1 CAACAACAACAACAACAGCAGAGTGGAAATGTTGGCAAGCTTGGTGAAAAGACGAATATA 184
* * * * *** * ** * ** *** * ******** * **
consensus_1954#0 AGTGGTAATGAAACTGGAGCAGGTGAAGGTGA--ACCAGAAGAAGAACCAGAGATAGTTC 297
consensus_1954#1 AGAACTATTCAACCTGCTCGACGTGATCACGATAGCCATAGTGGTAATAAAACAGGAGGT 244
** ** * ** *** * **** ** *** * ** * * *
consensus_1954#0 ATTATGACAAATCAAAATCGTTCTTTGATAACATCAGTTGCGAAGCAGTGGAGAGAAGTA 357
consensus_1954#1 ACTGTATCACAATATAATG----TTGGAAAACGT-------GATACAATGAAACAAGAT- 292
* * * ** * * *** ** ** *** * ** ** ** * * *
consensus_1954#0 AAGGACGATTNNAACGTACAGACTGGAGGACAGAGCGCAAATTGAACTCTGAAACATTTG 417
consensus_1954#1 --GGTCAACTTCAAGGTCAAGGT-----ACTCATGCTCAAGGTGGTCGTGGAAA----TC 341
** * * * ** ** ** ** *** ** * **** *
consensus_1954#0 GTGTAGCGTCAACGAGACGCGGT 440
consensus_1954#1 GTGGAGGATGGATGAATCGTGG- 363
*** ** * * ** ** **
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |