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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1966#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 611 fasta sequence
[CTTGCCTAGCTGGCTGACGTTGAGAACTCTTCGGCGTCGTTTGCGACGACAGCCAGTCGAAAAGGGAGTGTCCATCATCATCGATCGCTGTTTTCTCATTGGATTAGAAAGACTATCCAGGCGACGATTAATTAATGCCATACATTGTAATACACTAACGATACCATTACACGCGTAATAAGACATAACCGCCGTGGCCTATACCGTACACTGATAAATACATACACATACATACACGCGCGTATACATACACATACCACATATAAATATATACATACGATATGTATATGTACATCAGACAGATATATACACAGGTTCGTACACAGAAAAGTCGATATATGGTGCTAGGACGATCACACCCTGGTGCTTAATTCTGTATACACACAGAGCCATGTGCGTAAATTCGCACGGATCGCCTGCAGCCTTCGTCGAGGAGTCTAGATACGTCCTGACGCGTCGTGAACAGAACATAGATGGTCGAAACATATTTCCATTGTGTGATATCCGATACGAAGTAATGAAATTAATTAATAGTAGCATCAATATCGTTCCTGGGATTCTCCAAGGATTCTCCAAGACGATTATTAAAGGGAATATCATATAATATTAAC]
[+] EMBL BI509600 [CTTGCCTAGCTGGCTGACGTTGAGAACTCTTCGGCGTCGTTTGCGACGACAGCCAGTCGAAAAGGGAGTGTCCATCATCATCGATCGCTGTTTTCTCATTGGATTAGAAAGACTATCCAGGCGACGATTAATTAATGCCATACATTGTAATACACTAACGATACCATTACACGCGTAATAAGACATAACCGCCGTGGCCTATACCGTACACTGATAAATACATACACATACATACACGCGCGTATACATACACATACCACATATAAATATATACATACGATATGTATATGTACATCAGACAGATATATACACAGGTTCGTACACAGAAAAGTCGATATATGGTGCTAGGACGATCACACCCTGGTGCTTAATTCTGTATACACACAGAGCCATGTGCGTAAATTCGCACGGATCGCCTGCAGCCTTCGTCGAGGAGTCTAGATACGTCCTGACGCGTCGTGAACAGAACATAGATGGTCGAAACATATTTCCATTGTGTGATATCCGATACGAAGTAATGAAATTAATTAATAGTAGCATCAATATCGTTCCTGGGATTCTCCAAGGATTCTCCAAGACGATTATTAAAGGGAATATCATATAATATTAAC]
consensusID : consensus_1966#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 429 fasta sequence
[AACTTCGATTTAAGTATAGCTGCTCTTTTGAGTTCAATTAGTGGACGTTGAGGACGAGATCGCGCGCGGATCGCCATTCCTCTTCGCGAAGTGCGTATCGTCGAGTTTTATTTTATTATTTTTTTTTTTTCTTCTTCTTCTTCTTCTCTCTTAATAATCTCTCCGTTCCACACCCCAAGTGAATTATTGGCTCCCTTCGCTCTTTGCTCGTCGGCCACTCTCTATTTTACAATAGTATTATGGTACATATTATTAACGGGAGATCAGTGGCGCGCAGTGGCCTACGTGCGATGATACGAAGGAACCGATATTTATCCCGATCTCTAAAATGCAGGTACATTTGTTTTTTGCATCGTGCGTCAGAGCATAGTACGCATTTTCATTTTCACAAACTATATCTCCATCGGTTAATATTATATGATATTCCCT]
[+] EMBL BI504485 [AACTTCGATTTAAGTATAGCTGCTCTTTTGAGTTCAATTAGTGGACGTTGAGGACGAGATCGCGCGCGGATCGCCATTCCTCTTCGCGAAGTGCGTATCGTCGAGTTTTATTTTATTATTTTTTTTTTTTCTTCTTCTTCTTCTTCTCTCTTAATAATCTCTCCGTTCCACACCCCAAGTGAATTATTGGCTCCCTTCGCTCTTTGCTCGTCGGCCACTCTCTATTTTACAATAGTATTATGGTACATATTATTAACGGGAGATCAGTGGCGCGCAGTGGCCTACGTGCGATGATACGAAGGAACCGATATTTATCCCGATCTCTAAAATGCAGGTACATTTGTTTTTTGCATCGTGCGTCAGAGCATAGTACGCATTTTCATTTTCACAAACTATATCTCCATCGGTTAATATTATATGATATTCCCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1966#0 CTTGCCTAGCTGGCTGACGTTGAGAACTCTTCGGCGTCGTTTGCGACGACAGCCAGTCGA 60
consensus_1966#1 ---------------AACTTCGATTTAAGTATAGCTGCTCTTTTGAGTTCAATTAGTGGA 45
** * ** * ** * ** ** ** *** **
consensus_1966#0 AAAGGGAGTGTCCATCAT-CATCGATCGCTGTTTTCTCATTGGATTAGAAAGACTATCCA 119
consensus_1966#1 CGTTGAGGACGAGATCGCGCGCGGATCGCCATTC-CTCTTCG---CGAAGTGCGTATC-- 99
* * *** * ****** ** *** * * * * ****
consensus_1966#0 GGCGACGATTAATTAATGCCATACATTGTAATACACTAACGATACCATTACACGCGTAAT 179
consensus_1966#1 GTCGAGTTTTATTTTAT----TATTTTTTTTTTTTCTTCTTCTTCTTCTTCTCTCTTAAT 155
* *** *** ** ** ** ** * * ** * * * * * * ****
consensus_1966#0 AAGACATAACCGCCGTGGCCTATACCGTACACTGATAAATACATACACATACATACACGC 239
consensus_1966#1 AA-------TCTCTCCGTTCCACACCCCAAGTGAATTATTGGCTCCCTTCGC-TCTTTGC 207
** * * * * * *** * ** * * * * * * **
consensus_1966#0 GCGTATACATACACATACCACATATAAATATATACATACGATATGTATATGTACATCAGA 299
consensus_1966#1 TCGTCGGC-----CACTCTCTATTTTACAATAGTATTATGGTACATAT-----TATTAAC 257
*** * ** * ** * * *** ** * ** *** ** *
consensus_1966#0 CAGATATATACACAGGTTCGTACACAGAAAAGTCGATATATGGTGCTAGGACGATCACAC 359
consensus_1966#1 GGGAGAT-----CAG--TGGCGCGCAGTG--GCCTACGTGCGATGATACGAAG-----GA 303
** ** *** * * * *** * * * * * ** ** ** *
consensus_1966#0 CCTGGTGCTTAATTCTGTATACACACAGAGCCATGTGCGTAAATTCGCACGGATCGCCTG 419
consensus_1966#1 ACCGATATTTATCCCGATCTCTAAA-------ATGCAGGTACATTTG------TTTTTTG 350
* * * *** * * * * * *** *** *** * * **
consensus_1966#0 CAGCCTTCGTCGAGGAGTCTAGATACGTCCTGACGCGTCGTGAACAGAACATAGATGGTC 479
consensus_1966#1 CATCGTGCGTCA--GAGCATAG-TACGCATTTTCATTTTC---ACAAACTATA-----TC 399
** * * **** *** *** **** * * * *** * *** **
consensus_1966#0 GAAACATATTTCCATTGTGTGATATCCGATACGAAGTAATGAAATTAATTAATAGTAGCA 539
consensus_1966#1 TCCATCGGTTAATATTATATGATATTCCCT------------------------------ 429
* ** *** * ****** * *
consensus_1966#0 TCAATATCGTTCCTGGGATTCTCCAAGGATTCTCCAAGACGATTATTAAAGGGAATATCA 599
consensus_1966#1 ------------------------------------------------------------
consensus_1966#0 TATAATATTAAC 611
consensus_1966#1 ------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |