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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_200#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1104 fasta sequence
[TATTACTATTTTTTCTTTGGACGATATCGTAGGTGAACACATATTTTTTAAACTTGGTCACATGTGGCTTATTGGTCCAATATTTATTTGTTCTGGACTAATGGTGGCTGTCAAATGTATGCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAGACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGGTCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTATGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAGATTGAGCTACAGCCAACATTTCTTCTTGATGAATAAGATGAGTTGTATGATTGACAAGACTCATTAATTTTGATAAAGATGCAGCCCATGCGTCCAAAAGAGCAGCCGGCTCTTGGGTTCCTGTAAAACGAACCACACCGGCTGGACGATCCGTACGGGCATTTATCACACCAGTTTCTACTAAACTGCATAGNCATGCTTCAGTTTCTTCAACTGGTAAATCCAATAATTCAGCCATGCGAGTCAATGTAATTTTTGTGTAATATTTTGCCATAATTCTGATATTATGTTCGACAACACGATTTCGAAGATCGGCCCATCGTTTACNTNCTTCTTCAGTCCATAGACTAAAAACTTCTGTAGCTTTAAGATCTCTTTCGTAAATTTCGCAAAGTCCTGACCATTTTATTAGTTNNGGATTTACAAAAAGACGTAATAATTCCTTGTATGTTGGTATCTCATCAAGAAGTTTATCAGAAAGCAACCTATGGGTCAAATCAGCTTGTTCTGGTTCATGTGGTGCAAGTACGAGATACAGAACAGCTCGTGAAAGTGCAACATGTCTTTTTTCAGGATCATCTCTAACTGCTGGAGTTTCCAATACTGCTCGATTATGTCTACATAATTCTAAATGCCAACCTTCATGACGAGCCAATTCCATCATTAGATCATAATATTTCAATTTAAGAGATTGTGTTTCTTCATCATTTTCATCATTAAAAAATTTAACATTAATTTTCTTAGCTATTATTTGAGTGCGCA]
[+] EMBL BI507832 [TATTACTATTTTTTCTTTGGACGATATCGTAGGTGAACACATATTTTTTAAACTTGGTCACATGTGGCTTATTGGTCCAATATTTATTTGTTCTGGACTAATGGTGGCTGTCAAATGTATGCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAGACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGGTCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTATGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAGATTGAGCTACAGCCAACATTTCTTCTTGATGAATAAGATGAGTTGTATGATTGACAAGACTCATTAATTTTGATAAAGATGCAGCCCATGCGTCCAAAAGAGCAGCCGGCTCTTGGGTTCCTGTAAAACGAACCACACCGGCTGGACGATCCGTACGGGCATTTATCACACCAGTTTCTACTAAACTGCATAGNCATGCTTCAGTTTCTTCAACTGGTAAATCCAATAAT ]
[+] EMBL BI510210 [ ATTGGTCCAATATTTATTTGTTCTGGACTAATGGTGGCTGTCAAATGTATGCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAGACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGGTCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTATGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAGATTGAGCTACAGCCAACATTTCTTCTTGATGAATAAGATGAGTTGTATGATTGACAAGACTCATTAATTTTGATAAAGATGCAGCCCATGCGTCCAAAAGAGCAGCCGGCTCTTGGGTTCCTGTAAAACGAACCACACCGGCTGGACGATCCGTACGGGCATTTATCACACCAGTTTCTACTAAACTGCATAGACATGCTTCAGTTTCTTCAACTGGTAAATCCAATAATTCAGCCATGCGAGTCAATGTAATTTTTGTGTAATATTTTGCCATAATTCTGATATTCTATAGTGAAATAaat ]
[-] EMBL BI510044 [ TCAGTTTCTTCAACTGGTAAATCCAATAATTCAGCCATGCGAGTCAATGTAATTTTTGTGTAATATTTTGCCATAATTCTGATATTATGTTCGACAACACGATTTCGAAGATCGGCCCATCGTTTACGTCCTTCTTCAGTCCATAGACTAAAAACTTCTGTAGCTTTAAGATCTCTTTCGTAAATTTCGCAAAGTCCTGACCATTTTATTAGTTCTGGATTTACAAAAAGTCGTAATAATTCCTTGTATGTTGGTATCTCATCAAGAAGTTTATCAGAAAGCAACCTATGGGTCAAATCAGCTTGTTCTGGTTCATGTGGTGCAAGTACGAGATACAGAACAGCTCGTGAAAGTGCAACATGTCTTTTTTCAGGATCATCTCTAACTGCTGGAGTTTCCAATACTGCTCGATTATGTCTACATAATTCTAAATGCCAACCTTCATGACGAGCCAATTCCATCATTAGATCATAATATTTCAATTTAAGAGATTGTGTTTCTTCATCATTTTCATCATTAAAAAATTTAACATTAATTTTCTTAGCTATTATTTGAGTGCGCA]
[-] EMBL BI505571 [ TCAACTGGTAAATCCAATAATTCAGCCATGCGAGTCAATGTAATTTTTGTGTAATATTTTGCCATAATTCTGATATTATGTTCGACAACACGATTTCGAAGATCGGCCCATCGTTTACNTNCTTCTTCAGTCCATAGACTAAAAACTTCTGTAGCTTTAAGATCTCTTTCGTAAATTTCGCAAAGTCCTGACCATTTTATTAGTTNNGGATTTACAAAAAAA ]
consensusID : consensus_200#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 792 fasta sequence
[TTGTTCTGGACTAATGGTGGCTGTCAAATGTATGCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAGACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGGTCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTATGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAATACCAAATCAAATAGTGCAACTGTTTCTTGTGATAGCATCGCTATTGATCAAAACGTCAGGTGTAAACCTTGAAACAATATTTTTTTTCGATCGGAAGATTGATTACAATAAAAGCAGTAAATTCTTATTAAATTATGAACAATTGTTCATCTTTTTATGTCTGTTTGTTACATTGAACATTTTTTTTTTCTACTATAAAAAAATGTTACTTATCGCGTATCTTATATATTAAAAAATAAGGGGAAAAAAAGATGTATTCAATATATGCATTTATTAGNATATTAATGTCAATGAAACTATAAACATATGCAACGATTACGCATATTTTTTTTATAAAAAGTATTTGAATTAAAAAAAATTTATAAGATATGTCAATCATTCAATTAATGAAAGAATTTCTCACAAAGTGAAGTTATACGCAGAAAATTTACATATTAATATAATAACTAGTATAAGTTTTTTTAAACATATAAATTTTTATGAATATAATACGAAAAATTCATATAATTCATATAAAAATTTTTATGTTATATTTT]
[+] EMBL BI506263 [TTGTTCTGGACTAATGGTGGCTGTCAAATGTATGCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAGACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGGTCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTATGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAATACCAAATCAAATAGTGCAACTGTTTCTTGTGATAGCATCGCTATTGATCAAAACGTCAGGTGTAAACCTTGAAACAATATTTTTTTTCGATCGGAAGATTGATTACAATAAAAGCAGTAAATTCTTATTAAATTATGAACAATTGTTCATCTTTTTATGTCTGTTTGTTACATTGAACATTTTTTTTTTCTACTATAAAAAAATGTTACTTATCGCGTATCTTATATATTAAAAAATAAGGGGAAAAAAAGATGTATTCAATATATGCATTTATTAGNATATTAATGTCAATGAAACTATAAACATATGCAACGATTACGCATATTTTTTTT ]
[+] EMBL BI510904 [ ACTCCAGGTCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTATGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAATACCAAATCAAATAGTGCAACTGTTTCTTGTGATAGCATCGCTATTGATCAAAACGTCAGGTGTAAACCTTGAAACAATATTTTTTTTCGATCGGAAGATTGATTACAATAAAAGCAGTAAATTCTTATTAAATTATGAACAATTGTTCATCTTTTTATGTCTGTTTGTTACATTGAACATTTTTTTTTTCTACTATAAAAAAATGTTACTTATCGCGTATCTTATATATTAAAAAATAAGGGGAAAAAAAGATGTATTCAATATATGCATTTATTAGAATATTAATGTCAATGAAACTATAAACATATGCAACGATTACGCATATTTTTTTTATAAAAAGTATTTGAATTAAAAAAAATTTATAAGATATGTCAATCATTCAATTAATGAAAGAATTTCTCACAAAGTGAAGTTATACGCAGAAAATTTACATATTAATATAATAACTAGTATAAGTTTTTTTAAACATATAAATTTTTATGAATATAATACGAAAAATTCATATAATTCATATAAAAATTTTTATGTTATATTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_200#0 TATTACTATTTTTTCTTTGGACGATATCGTAGGTGAACACATATTTTTTAAACTTGGTCA 60
consensus_200#1 ------------------------------------------------------------
consensus_200#0 CATGTGGCTTATTGGTCCAATATTTATTTGTTCTGGACTAATGGTGGCTGTCAAATGTAT 120
consensus_200#1 ---------------------------TTGTTCTGGACTAATGGTGGCTGTCAAATGTAT 33
*********************************
consensus_200#0 GCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAG 180
consensus_200#1 GCTTTATCTTCGACGAAAATCTGTTATACAAATGATCTTTCATCAACGACAATTGTTCAG 93
************************************************************
consensus_200#0 ACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGG 240
consensus_200#1 ACATTTGCAGGAATTAAGCGGTACTCGTGGTATTGAACGTATTGATATACAAACTCCAGG 153
************************************************************
consensus_200#0 TCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTA 300
consensus_200#1 TCCACCTTCTTATGAAGCAATTGCTCAGGAAAGCTGTAACGAATTACCTCCGCCTTCTTA 213
************************************************************
consensus_200#0 TGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAG-ATTGAGCTACAGCCAAC 359
consensus_200#1 TGCAGAAGCGGTAGCGCTTATACGCAAGACTATTGGAAGCAATACCAAATCAAATAGTGC 273
***************************************** * * * * *
consensus_200#0 ATTTCTTCTTGATGAATAAGATGAGTTGTATGATTGACAAGACTCAT-TAATTTTGATAA 418
consensus_200#1 AACTGTTTCTTGTGA-TAGCATC-GCTAT-TGATCAAAACGTCAGGTGTAAACCTTGAAA 330
* * ** * *** ** ** * * * **** * * * * * *** * **
consensus_200#0 AGATGCAGCCCATGCGTCCAAAAGAGCAGCCG-------GCTCTTGGGTTCCTGTAAAAC 471
consensus_200#1 CAATATTTTTTTT-CGATCGGAAGATTGATTACAATAAAAGCAGTAAATTCTTATTAAAT 389
** * ** * **** * *** * * ***
consensus_200#0 GAACCACACCGGCTGGACGATCCGTACGGGCATTTATCACACCAG-----TTTCTACTAA 526
consensus_200#1 TATGAACAATTGTTCATC--TTTTTATGTCTGTTTGTTACATTGAACATTTTTTTTTTCT 447
* *** * * * * ** * *** * *** *** * *
consensus_200#0 ACTGCATAGNCATGCTTCAGTTTCTTCAACTGGTAAATCCAATAATTCAGCCATGCGAGT 586
consensus_200#1 ACTATAAAAAAATGTTACTTATCGCGTATCTTATATATTAAAAAATA---------AGGG 498
*** * * *** * * * * ** ** ** ** *** *
consensus_200#0 CAATGTAATTTTTGTGTAATATTTTGCCATAATTCTGATATTATGTTCGACAACACGATT 646
consensus_200#1 GAAAAAAAGATGTATTCAATATAT-GCATTTATTAGNATATTAATGTCAATGAAACTAT- 556
** ** * * * ***** * ** * *** ****** ** * * ** **
consensus_200#0 TCGAAGATCGGCCCATCGTTTACNTNCTTCTTCAGTCCATAGACTAAAAACTTCTGTAGC 706
consensus_200#1 ----AAACATATGCAACGATTACGCATATTTTT--TTTATA----AAAAGTATTTGAA-- 604
* * ** ** **** * ** * *** **** * ** *
consensus_200#0 TTTAAGATCTCTTTCGTAAATTTCGCAAAGTCCTGACCATTTTATTAGTTNNGGA-TTTA 765
consensus_200#1 -TTAAAA--------AAAATTTATAAGATATGTCAATCATTCAATTAATGAAAGAATTTC 655
**** * ** ** * * * **** **** * ** ***
consensus_200#0 CAAAAAGACGTAATAATTCCTTGTATGTTGGTATCTCATCAAGAAGTTTATCAGAAAGCA 825
consensus_200#1 TCACAAAGTGAAGTTATACGCAGAAAATTTACAT---ATTAATATAATAACTAGTATAAG 712
* ** * * * ** * * * ** ** ** ** * * * ** *
consensus_200#0 ACCTATGGGTCAAATCAGCTTGTTCTGGTTCATGTGGTGCAAGTACGAGATACAGAACAG 885
consensus_200#1 TTTTTTTAAACATATAAATTT-TTATGA---ATATAATACGAAAAATTCATATAATTCA- 767
* * ** ** * ** ** ** ** * * * * * *** * **
consensus_200#0 CTCGTGAAAGTGCAACATGTCTTTTTTCAGGATCATCTCTAACTGCTGGAGTTTCCAATA 945
consensus_200#1 --TATAAAAAT-TTTTATGTTATATTTT-------------------------------- 792
* *** * **** * ***
consensus_200#0 CTGCTCGATTATGTCTACATAATTCTAAATGCCAACCTTCATGACGAGCCAATTCCATCA 1005
consensus_200#1 ------------------------------------------------------------
consensus_200#0 TTAGATCATAATATTTCAATTTAAGAGATTGTGTTTCTTCATCATTTTCATCATTAAAAA 1065
consensus_200#1 ------------------------------------------------------------
consensus_200#0 ATTTAACATTAATTTTCTTAGCTATTATTTGAGTGCGCA 1104
consensus_200#1 ---------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |