Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 209 cluster # 209       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_209#0 length = 701 sequences # 6  
consensusID : consensus_209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 701
fasta sequence 
                              [CCTGCTTTTTTTTTTCGACTAAAGCACCATGGGTATTTCTCGCGATCATTGGCATAAGAGGCGAGCAACTGGTGGTAAAAGAAAACCAATCCGTAAAAAGAGAAAATTTGAATTAGGTCGTCCAGCTGCAAATACGAAACTTGGACCTCAACGTATTCATACGGTACGTACCAGAGGTGGTAACAAAAAATATAGAGCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAATGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGNCCTGGACAGTGCGGTCGTGCGGATGGTTATATACTTGAAGGAAAAGAACTTGAATTTTATATGAGAAAAATTAAAAGCAAAAAAGCCAAATAAATATGTAATTACAAGAAGAAAATAAAATAATCTGTACGAAAAAAAA]

[+] EMBL BI509458             [CCTGCTTTTTTTTTTCGACTAAAGCACCATGGGTATTTCTCGCGATCATTGGCATAAGAGGCGAGCAACTGGTGGTAAAAGAAAACCAATCCGTAAAAAGAGAAAATTTGAATTAGGTCGTCCAGCTGCAAATACGAAACTTGGACCTCAACGTATTCATACGGTACGTACCAGAGGTGGTAACAAAAAATATAGAGCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAATGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGNCCTGGACAGT                                                                                                                                 ]
[+] EMBL AF080430             [                                      CTCGCGATCATTGGCATAAGAGGCGAGCAACTGGTGGTAAAAGAAAACCAATCCGTAAAAAGAGAAAATTTGAATTAGGTCGTCCAGCTGCAAATACGAAACTTGGACCTCAACGTATTCATACGGTACGTACCAGAGGTGGTAACAAAAAAT   TATCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAATGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGACCTGGACAGTGCGGTCGTGAGGATGGTTATATACTTGAAGGAAAAGAACTTGAATTTTATATGAGAAGAATTAAAAGCAAAAAAGCCAAATAAATATGTTATTACAAGAAGAAAATAAAATAATCTGTACGCAAAA   ]
[+] EMBL BI506711             [                                                           GGCGAGCAACTGGTGGTAAAAGAAAACCAATCCGTAAAAAGAGAAAATTTGAATTAGGTCGTCCAGCTGCAAATACGAAACTTGGACCTCAACGTATTCATACGGTACGTACCAGAGGTGGTAACAAAAAATATAGAGCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAATGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGNCCTGGACAGTGCGGTCGTGCGGATGGTTATATACTTGAAGGAAAAGAACTTGAATTTTATATGAGAAAAATTAAAAGCAAAAAAGCCAAA                                                 ]
[+] EMBL BI509547             [                                                                                            GTAAAAAGAGAAAATTTGAATTAGGTCGTCCAGCTGCAAATACGAAACTTGGACCTCAACGTATTCATACGGTACGTACCAGAGGTGGTAACAAAAAATATAGAGCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAATGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGNCCTGGACAGT                                                                                                                                 ]
[+] EMBL BI509919             [                                                                                                                                                           TTCATACGGTACGTACCAGAGGTGGTAACAAAAAATATAGAGCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAGTGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGACCT GANNGTGCGGTCGTGCGGATGGTTATATACTTGAAGGAAAAGAACTTGAATTTTATATGAGAAAAATTAAAAGCAAAAAAGCCAAATAAATATGTAATTACAAGAAGAAAATAAAATAATCTGTACGAAAAAAAA]
[+] EMBL BI509535             [                                                                                                                                                                      CGTACCAGAGGTGGTAACAAAAAATATAGAGCACTTCGTTTANNTACAGGAAATTTTTCATGGGGATCTGAATGTACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGTGAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACAATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGAAGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGCAAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGTTCTTGCTTGTATATCGAGTAGACCTGGACAGTGCGGTCGTGCGGATGGTTATATACTTGAAGGAAAAGAACTTGAATTTTATATGAGAAAAATTAAAAGCAAAAAAGCCAAATAAATATGTAATTACAAGAAGAAAATAAAATAATCTGTACGAAAAAA  ]




>consensus_209#0
CCTGCTTTTTTTTTTCGACTAAAGCACCATGGGTATTTCTCGCGATCATTGGCATAAGAG
GCGAGCAACTGGTGGTAAAAGAAAACCAATCCGTAAAAAGAGAAAATTTGAATTAGGTCG
TCCAGCTGCAAATACGAAACTTGGACCTCAACGTATTCATACGGTACGTACCAGAGGTGG
TAACAAAAAATATAGAGCACTTCGTTTAGATACAGGAAATTTTTCATGGGGATCTGAATG
TACTACAAGAAAAACACGTATTATAGATGTAGTTTATAATGCATCAAATAATGAATTGGT
GAGAACAAAAACTCTTGTAAAGAATGCAATTGTCACTATTGATGCAACACCTTTCAGACA
ATGGTATGAAGGTCATTATGTTTTACCATTGGGTCGTAAACGAGGTGCGAAACTGACTGA
AGCTGAAGAAGAAGTTTTAAATAAAAAACGTTCGAAAAAAGCAGAAGCTAAATATAAAGC
AAGGCAACGATTTGCTAAAGTTGAACCTGCTCTTGAGGAACAATTTGCTACAGGACGTGT
TCTTGCTTGTATATCGAGTAGNCCTGGACAGTGCGGTCGTGCGGATGGTTATATACTTGA
AGGAAAAGAACTTGAATTTTATATGAGAAAAATTAAAAGCAAAAAAGCCAAATAAATATG
TAATTACAAGAAGAAAATAAAATAATCTGTACGAAAAAAAA

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)