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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[TCTTAAGGAGGCAGTAAATGCATTGGAGCGTGGTGATAAGAAGGTAGAAAAGGTATGTTGTGAGGCTATATTTCGGTTTCTATGACGCAATACGTTCATTTTTAGGCTCAAGAGGATGTCAGTAAAAATTTAGTACATATAAAAAATATGCTTTATGGAACAGCTGAAACAGAACCTCAAGCAGATATTGTTGTTGCCCAATTGGCGCAGGAATTGTATAATAGTAATTTGTTGCTTTTACTTGTGCAAAATCTTAGTCGCATAGATTTCGAGGGTAAAAAGGATGTTGCTCAAGTATTTAATAACATATTACGGAGACAAATTGGAACCAGATCTCCAACAGTAGAATATATATGTACTAAACCAGAAATATTATTTACTCTTATGTCTGGGTATGAACACCAAGACATTGCTTTAAACTGTGGCACTATGTTAAGAGAGTGTGCAAGATATGAGGCCTTGGCTAAAATCATGATCTATTCGGACGATTTTTANNATTTTTTCAGATATGTTGAAGTATCAACTTTTGACATAGCTTCCGACGCGTTTTCTACATTCAAAGTAAGCGATGATAAAGCGCATAATATATCG]
[+] EMBL BI514907 [TCTTAAGGAGGCAGTAAATGCATTGGAGCGTGGTGATAAGAAGGTAGAAAAGGTATGTTGTGAGGCTATATTTCGGTTTCTATGACGCAATACGTTCATTTTTAGGCTCAAGAGGATGTCAGTAAAAATTTAGTACATATAAAAAATATGCTTTATGGAACAGCTGAAACAGAACCTCAAGCAGATATTGTTGTTGCCCAATTGGCGCAGGAATTGTATAATAGTAATTTGTTGCTTTTACTTGTGCAAAATCTTAGTCGCATAGATTTCGAGGGTAAAAAGGATGTTGCTCAAGTATTTAATAACATATTACGGAGACAAATTGGAACCAGATCTCCAACAGTAGAATATATATGTACTAAACCAGAAATATTATTTACTCTTATGTCTGGGTATGAACACCAAGACATTGCTTTAAACTGTGGCACTATGTTAAGAGAGTGTGCAAGATATGAGGCCTTGGCTAAAATCATGATCTATTCGGACGATTTTTANNATTTTTTCAGATATGTTGAAGTATCAACTTTTGACATAGCTTCCGACGCGTTTTCTACATTCAAAGTAAGCGATGATAAAGCGCATAATATATCG]
consensusID : consensus_2137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence
[CTGAAGAAATATGTTTAACATAATTTATTGTAAACCTTTTAACATATGAAAGAAATATTCGCAAAGTACNNNTGTATAATAAAAATTCTTTATGAATATATATATATATAAAAATTGAACTATTGTAAATTTAGAATATGAATAATAGAATAGAACAATTTTTATGCATAAATTTAAAATTTGAAATATTCATCAATTAAATCACGTCTGTACATTGTGAAAAACATGCCTCTGTTCGGAAAGTCTCAAAAGAGTCCGGCGGAGGTGGTGAAAGCTCTTAAGGAGGCAGTAAATGCATTGGAGCGTGGTGATAAGAAGGTAGAAAAGGCTCAAGAGGATGTCAGTAAAAATTTAGTACATATAAAAAATATGCTTTATGGAACAGCTGAAACAGAACCTCAAGCAGATATTGTTGTTGCCCAATTGGCGCAGGAATTGTATAATAGTAATTTGTTGCTTTTACTTGTGCAAAATCTTAGTCGCATAGATTTCGAGGGTAAAAAGGATGTTGCTCAAGTATTTAATAACATATTACGGAGACAAATTGGAACCAGATCTCCAACAGTAGAATA]
[+] EMBL BI504018 [CTGAAGAAATATGTTTAACATAATTTATTGTAAACCTTTTAACATATGAAAGAAATATTCGCAAAGTACNNNTGTATAATAAAAATTCTTTATGAATATATATATATATAAAAATTGAACTATTGTAAATTTAGAATATGAATAATAGAATAGAACAATTTTTATGCATAAATTTAAAATTTGAAATATTCATCAATTAAATCACGTCTGTACATTGTGAAAAACATGCCTCTGTTCGGAAAGTCTCAAAAGAGTCCGGCGGAGGTGGTGAAAGCTCTTAAGGAGGCAGTAAATGCATTGGAGCGTGGTGATAAGAAGGTAGAAAAGGCTCAAGAGGATGTCAGTAAAAATTTAGTACATATAAAAAATATGCTTTATGGAACAGCTGAAACAGAACCTCAAGCAGATATTGTTGTTGCCCAATTGGCGCAGGAATTGTATAATAGTAATTTGTTGCTTTTACTTGTGCAAAATCTTAGTCGCATAGATTTCGAGGGTAAAAAGGATGTTGCTCAAGTATTTAATAACATATTACGGAGACAAATTGGAACCAGATCTCCAACAGTAGAATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2137#0 ------------------------------------------------------------
consensus_2137#1 CTGAAGAAATATGTTTAACATAATTTATTGTAAACCTTTTAACATATGAAAGAAATATTC 60
consensus_2137#0 ------------------------------------------------------------
consensus_2137#1 GCAAAGTACNNNTGTATAATAAAAATTCTTTATGAATATATATATATATAAAAATTGAAC 120
consensus_2137#0 ------------------------------------------------------------
consensus_2137#1 TATTGTAAATTTAGAATATGAATAATAGAATAGAACAATTTTTATGCATAAATTTAAAAT 180
consensus_2137#0 --------------------------------TCTTAAGGAGGCAGTAAATGCATT-GGA 27
consensus_2137#1 TTGAAATATTCATCAATTAAATCACGTCTGTACATTGTGAAAAACATGCCTCTGTTCGGA 240
** * * * * ** ***
consensus_2137#0 GCGTGGTGATAA--------GAAGGTAGAAAAGGTATGTTGTGAGGCTATATTTCGGTTT 79
consensus_2137#1 AAGTCTCAAAAGAGTCCGGCGGAGGTGGTGAAAGCTCTTAAGGAGGCAGTAAATGCATTG 300
** * * * **** * ** * * ***** ** * **
consensus_2137#0 CTATGACGCAATACGTTCATTTTTA-GGCTCAAGAGGATGTCAGTAAAAATTTAGTACAT 138
consensus_2137#1 GAGCGTGGTGATAAGAAGGTAGAAAAGGCTCAAGAGGATGTCAGTAAAAATTTAGTACAT 360
* * *** * * * **********************************
consensus_2137#0 ATAAAAAATATGCTTTATGGAACAGCTGAAACAGAACCTCAAGCAGATATTGTTGTTGCC 198
consensus_2137#1 ATAAAAAATATGCTTTATGGAACAGCTGAAACAGAACCTCAAGCAGATATTGTTGTTGCC 420
************************************************************
consensus_2137#0 CAATTGGCGCAGGAATTGTATAATAGTAATTTGTTGCTTTTACTTGTGCAAAATCTTAGT 258
consensus_2137#1 CAATTGGCGCAGGAATTGTATAATAGTAATTTGTTGCTTTTACTTGTGCAAAATCTTAGT 480
************************************************************
consensus_2137#0 CGCATAGATTTCGAGGGTAAAAAGGATGTTGCTCAAGTATTTAATAACATATTACGGAGA 318
consensus_2137#1 CGCATAGATTTCGAGGGTAAAAAGGATGTTGCTCAAGTATTTAATAACATATTACGGAGA 540
************************************************************
consensus_2137#0 CAAATTGGAACCAGATCTCCAACAGTAGAATATATATGTACTAAACCAGAAATATTATTT 378
consensus_2137#1 CAAATTGGAACCAGATCTCCAACAGTAGAATA---------------------------- 572
********************************
consensus_2137#0 ACTCTTATGTCTGGGTATGAACACCAAGACATTGCTTTAAACTGTGGCACTATGTTAAGA 438
consensus_2137#1 ------------------------------------------------------------
consensus_2137#0 GAGTGTGCAAGATATGAGGCCTTGGCTAAAATCATGATCTATTCGGACGATTTTTANNAT 498
consensus_2137#1 ------------------------------------------------------------
consensus_2137#0 TTTTTCAGATATGTTGAAGTATCAACTTTTGACATAGCTTCCGACGCGTTTTCTACATTC 558
consensus_2137#1 ------------------------------------------------------------
consensus_2137#0 AAAGTAAGCGATGATAAAGCGCATAATATATCG 591
consensus_2137#1 ---------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |