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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2188#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence
[CACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGAGGATCAGGGATCGTTGCCCTGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCTATCTGCCCCTTCCTTCTAGAATTGGTAGAATTCGAGTAGGAACAGGAGCGAAACTCGTCCACGAGCTTAGACGAGATGATTAATAAGCATAAGCTTCTGAGAGACACGAGCCATTATTTTAATGGGTCGTTAGACTCGATAAGCGATTCCGCCTTCATCCAGCTGGCTAATTTGACGAGCTTTTAACAAAATAGGTCGGATGTAAGTAAGAATAATAACGACGTACTCGCCGAGTTTAGATTTTAGATCGGTGGGACGAGTCTTGTAGAAGTAGATAGTAAGTAGAGAGGAGAGAATT]
[+] EMBL BI514275 [CACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGAGGATCAGGGATCGTTGCCCTGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCTATCTGCCCCTTCCTTCTAGAATTGGTAGAATTCGAGTAGGAACAGGAGCGAAACTCGTCCACGAGCTTAGACGAGATGATTAATAAGCATAAGCTTCTGAGAGACACGAGCCATTATTTTAATGGGTCGTTAGACTCGATAAGCGATTCCGCCTTCATCCAGCTGGCTAATTTGACGAGCTTTTAACAAAATAGGTCGGATGTAAGTAAGAATAATAACGACGTACTCGCCGAGTTTAGATTTTAGATCGGTGGGACGAGTCTTGTAGAAGTAGATAGTAAGTAGAGAGGAGAGAATT]
consensusID : consensus_2188#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence
[TCGCCTCGACTCCGAGGGGCGTAACAAGGAGCTCTGGTACAAGGAAGGCTGCGCGACGGCTATTCAAATGTGGCTGGTGACCAGGCTGCACGTGGTCGGGACCGTTGGCCTCGTGGTGGCCTTCCTCCAGTTGTTCGGCCAGGTGGCCAGCATGATCCTCTTCTGCACCGTCAGGCACAAGAGGTCGTCCCACACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGNGGATCAGGGATCGTTGCCCCTGTATGCCCCGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCT]
[+] EMBL BI516261 [TCGCCTCGACTCCGAGGGGCGTAACAAGGAGCTCTGGTACAAGGAAGGCTGCGCGACGGCTATTCAAATGTGGCTGGTGACCAGGCTGCACGTGGTCGGGACCGTTGGCCTCGTGGTGGCCTTCCTCCAGTTGTTCGGCCAGGTGGCCAGCATGATCCTCTTCTGCACCGTCAGGCACAAGAGGTCGTCCCACACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGNGGATCAGGGATCGTTGCCCCTGTATGCCCCGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2188#0 ------------------------------------------------------------
consensus_2188#1 TCGCCTCGACTCCGAGGGGCGTAACAAGGAGCTCTGGTACAAGGAAGGCTGCGCGACGGC 60
consensus_2188#0 ------------------------------------------------------------
consensus_2188#1 TATTCAAATGTGGCTGGTGACCAGGCTGCACGTGGTCGGGACCGTTGGCCTCGTGGTGGC 120
consensus_2188#0 ------------------------------------------------------------
consensus_2188#1 CTTCCTCCAGTTGTTCGGCCAGGTGGCCAGCATGATCCTCTTCTGCACCGTCAGGCACAA 180
consensus_2188#0 ------------CACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGAT 48
consensus_2188#1 GAGGTCGTCCCACACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGAT 240
************************************************
consensus_2188#0 CTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATAT 108
consensus_2188#1 CTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATAT 300
************************************************************
consensus_2188#0 ATATATAT--GTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGC 166
consensus_2188#1 ATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGC 360
******** **************************************************
consensus_2188#0 CGCCGATACGAAGAGGATCAGGGATCGTTGCCCT----------GAAATCTCGAATCCCC 216
consensus_2188#1 CGCCGATACGAAGNGGATCAGGGATCGTTGCCCCTGTATGCCCCGAAATCTCGAATCCCC 420
************* ******************* ****************
consensus_2188#0 CCCTTGTAAATTGTTTTCCTTCGAAAAAATCTATCTGCCCCTTCCTTCTAGAATTGGTAG 276
consensus_2188#1 CCCTTGTAAATTGTTTTCCTTCGAAAAAATCT---------------------------- 452
********************************
consensus_2188#0 AATTCGAGTAGGAACAGGAGCGAAACTCGTCCACGAGCTTAGACGAGATGATTAATAAGC 336
consensus_2188#1 ------------------------------------------------------------
consensus_2188#0 ATAAGCTTCTGAGAGACACGAGCCATTATTTTAATGGGTCGTTAGACTCGATAAGCGATT 396
consensus_2188#1 ------------------------------------------------------------
consensus_2188#0 CCGCCTTCATCCAGCTGGCTAATTTGACGAGCTTTTAACAAAATAGGTCGGATGTAAGTA 456
consensus_2188#1 ------------------------------------------------------------
consensus_2188#0 AGAATAATAACGACGTACTCGCCGAGTTTAGATTTTAGATCGGTGGGACGAGTCTTGTAG 516
consensus_2188#1 ------------------------------------------------------------
consensus_2188#0 AAGTAGATAGTAAGTAGAGAGGAGAGAATT 546
consensus_2188#1 ------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |