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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 2206 cluster # 2206       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2206#0 length = 458 sequences # 1  
 consensus_2206#1 length = 295 sequences # 1  
consensusID : consensus_2206#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 458
fasta sequence 
                              [GTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCGTCAATTTGTTCATCCCGTTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTAGTTACCGGAGGTGGTGGTGGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGTGCCATTGTTGTCATCTGGGACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTGCAGTCCGCGGGTGGTACTTGTTACGGTTATGTTTGCGA]

[+] EMBL BI511712             [GTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCGTCAATTTGTTCATCCCGTTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTAGTTACCGGAGGTGGTGGTGGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGTGCCATTGTTGTCATCTGGGACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTGCAGTCCGCGGGTGGTACTTGTTACGGTTATGTTTGCGA]




>consensus_2206#0
GTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCT
GATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAA
AAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTA
ATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATC
GTCAATTTGTTCATCCCGTTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTA
GTTACCGGAGGTGGTGGTGGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGT
GCCATTGTTGTCATCTGGGACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTG
CAGTCCGCGGGTGGTACTTGTTACGGTTATGTTTGCGA

consensusID : consensus_2206#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence 
                              [AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA]

[+] EMBL BI503858             [AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA]




>consensus_2206#1
AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGT
CCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGC
ACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTC
GATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATA
GTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2206#0      ------------------------------------------GTAACAAACCTCATCCGT 18
consensus_2206#1      AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGT 60
                                                                ******************

consensus_2206#0      CCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGC 78
consensus_2206#1      CCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGC 120
                      ************************************************************

consensus_2206#0      ACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTC 138
consensus_2206#1      ACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTC 180
                      ************************************************************

consensus_2206#0      GATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATA 198
consensus_2206#1      GATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATA 240
                      ************************************************************

consensus_2206#0      GTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCGTCAATTTGTTCATCCCG 258
consensus_2206#1      GTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA----- 295
                      ******************************************            *     

consensus_2206#0      TTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTAGTTACCGGAGGTGGTGGT 318
consensus_2206#1      ------------------------------------------------------------
                                                                                  

consensus_2206#0      GGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGTGCCATTGTTGTCATCTGG 378
consensus_2206#1      ------------------------------------------------------------
                                                                                  

consensus_2206#0      GACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTGCAGTCCGCGGGTGGTACT 438
consensus_2206#1      ------------------------------------------------------------
                                                                                  

consensus_2206#0      TGTTACGGTTATGTTTGCGA 458
consensus_2206#1      --------------------


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)