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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2341#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[CAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACGGAGAATTGACGTACGATGTGATTAAAAATATGAAATATTTGGACAAGGTTCTCAAAGAAACTTTAAGGAAGTATCCAATAATGGCAATGCTAACCAGAGAAGCGCAGGAAAATTACACGTTTAAGGGCACTAAAGTTACTATCGAGAAGGGTATAAAAGTGTGGATACTGCCGTATGGAATTCAAAATGATCCGGATATATTTCCAAATCCTGATATTTTCGACCCCGAAAGATTCGATGAGGAGGCTGTAGCTGCCAGGCATCCAATGAGTTATTTACCTTTTGGCGATGGACCAAGAAACTGCATTGGTGCACGTTTTGCACAATTTCAAAGCAAAATTGGTATTATAACAATTGTTCGTAATCACAAAATTGATGTTTGCGAGCAAACTAAGATTCCATACGAAAGTGATCCATTTCAATTTTTGTTAGCACTGAAAGGAGGTATCAATCTAAAAAATAAGTAAAATATAAAATTAATATGAGTATTATGTATGTATATATGCATATTAACAAAAGTTAATATGTAAAAGTTATTCAACATATATTAGTTAAAAGTTTGTAAAGTTTAAAAGATAATTATGAGATTATAAAATTTAT]
[+] EMBL BI503528 [CAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACGGAGAATTGACGTACGATGTGATTAAAAATATGAAATATTTGGACAAGGTTCTCAAAGAAACTTTAAGGAAGTATCCAATAATGGCAATGCTAACCAGAGAAGCGCAGGAAAATTACACGTTTAAGGGCACTAAAGTTACTATCGAGAAGGGTATAAAAGTGTGGATACTGCCGTATGGAATTCAAAATGATCCGGATATATTTCCAAATCCTGATATTTTCGACCCCGAAAGATTCGATGAGGAGGCTGTAGCTGCCAGGCATCCAATGAGTTATTTACCTTTTGGCGATGGACCAAGAAACTGCATTGGTGCACGTTTTGCACAATTTCAAAGCAAAATTGGTATTATAACAATTGTTCGTAATCACAAAATTGATGTTTGCGAGCAAACTAAGATTCCATACGAAAGTGATCCATTTCAATTTTTGTTAGCACTGAAAGGAGGTATCAATCTAAAAAATAAGTAAAATATAAAATTAATATGAGTATTATGTATGTATATATGCATATTAACAAAAGTTAATATGTAAAAGTTATTCAACATATATTAGTTAAAAGTTTGTAAAGTTTAAAAGATAATTATGAGATTATAAAATTTAT]
consensusID : consensus_2341#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence
[TTCCATATCGGACAAGGACAGCGAGTTTCGTATAATCGGCAGAAAATTATTCACGCCCACGTTTAAAACAATAGTCAGAGATGTCTGCAGGCAATTTTTGCCAGGATTGTACGATGTGATCGGTCACAAGCTTCAAATCGAAGAAGTAAATGAATTTCTCACGAATCTGATCAAGGACACGATAAATTACAGAAAAGAGAACAAAATAGTTAGACCCGATTTTGTCAACACATTGATAGAGCTTAAAGATCATCCAGAGAAATTAGAAACTATAAAGCTGACAGATTCGATGATTGCTTCGCAAGCTTTTGTCTTTTTTGTTGCTGGTTTCGAAACTTCTTCATCCACGATATCTCATGCCCTTTACGAGCTGGCGCAGAATCAGGAAATCCAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACAGAGAATTGACGTACGATGTGATTAAAAATATG]
[+] EMBL BI509645 [TTCCATATCGGACAAGGACAGCGAGTTTCGTATAATCGGCAGAAAATTATTCACGCCCACGTTTAAAACAATAGTCAGAGATGTCTGCAGGCAATTTTTGCCAGGATTGTACGATGTGATCGGTCACAAGCTTCAAATCGAAGAAGTAAATGAATTTCTCACGAATCTGATCAAGGACACGATAAATTACAGAAAAGAGAACAAAATAGTTAGACCCGATTTTGTCAACACATTGATAGAGCTTAAAGATCATCCAGAGAAATTAGAAACTATAAAGCTGACAGATTCGATGATTGCTTCGCAAGCTTTTGTCTTTTTTGTTGCTGGTTTCGAAACTTCTTCATCCACGATATCTCATGCCCTTTACGAGCTGGCGCAGAATCAGGAAATCCAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACAGAGAATTGACGTACGATGTGATTAAAAATATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2341#0 CAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACGGAGAATTG-----A 55
consensus_2341#1 ----TTCCATATCG-GACAAGGACAGCGAGTTTCGTATAATCGGCAGAAAATTATTCACG 55
*** ** * *** ** ** * ** * ** ****
consensus_2341#0 CGTACGATGTGATTAAAAATATGAAATATTTGGACAAGGTTCTCAAAGAAACTTTAAGGA 115
consensus_2341#1 CCCACGTTTAAAACAATAGTCAGAGATGTCTGCAGGCAATTTTTGCCAGGATTGTACGAT 115
* *** * * ** * * ** ** * ** * ** * * * ** *
consensus_2341#0 AGTATCCAATAATGGCAATGCTAACCAGAGAAGCGCAGGAAAATTACACGTTTAAGGGCA 175
consensus_2341#1 GTGATCGGTCACAAGC--TTCAAATCGAAGAAGTAAATGAATTTCTCACGAATCTG---A 170
*** * ** * * ** * ***** * *** * **** * * *
consensus_2341#0 CTAAAGTTACTATCGAGAAGGGTATAAAAGTGTGGATACTGCCGTATGGAATTCAAAATG 235
consensus_2341#1 TCAAGGACACGAT-----AAATTACAGAAAAGAGAACAAAATAGTTAG--ACCCGATTTT 223
** * ** ** * ** * ** * * * * ** * * * * *
consensus_2341#0 ATCCGGATATATTTCCAAATCCTGATATTTTCGACCCCGAAAGATTCGATGAGGAGGCTG 295
consensus_2341#1 GTC--AACACATTGATAGAGCTTAAAGATC---ATCCAGAGAAATTAGA----AACTATA 274
** * * *** * * * * * * * ** ** * *** ** * *
consensus_2341#0 TAGCTGCCAGGCATCCAATGAGTTATTTACCTTTTGGCGATGGACCAAGAAACTGCATTG 355
consensus_2341#1 AAGCTGACAG--ATTCGATGATTGCTTCGC------------AAGCTTTTGTCTTTTTTG 320
***** *** ** * **** * ** * * * ** ***
consensus_2341#0 GTGCACGTTTTGCACAATTTCAAAGCAAAATTGGTATTATAACAATTGTTCGTAATCACA 415
consensus_2341#1 TTGCTGGTTTCGAAACTTCTTCATCCACGAT--ATCTCATGCCCTTTACGAGCTGGCGCA 378
*** **** * * * * * ** ** * * ** * ** * * **
consensus_2341#0 AAATTGATGTTTGCGAG-CAAACTAAGATTCCATACGAAAGTGATCCATTTCAATTTTTG 474
consensus_2341#1 GAATCAGGAAATCCAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACAG 438
*** * * ** *** ** * * * * ** * ** ** *
consensus_2341#0 TTAGCACTGAAAGGAGGTATCAATCTAAAAAATAAGTAAAATATAAAATTAATATGAGTA 534
consensus_2341#1 --AGAATTGACGTACGATGT-GATTAAAAATATG-------------------------- 469
** * *** * * * ** **** **
consensus_2341#0 TTATGTATGTATATATGCATATTAACAAAAGTTAATATGTAAAAGTTATTCAACATATAT 594
consensus_2341#1 ------------------------------------------------------------
consensus_2341#0 TAGTTAAAAGTTTGTAAAGTTTAAAAGATAATTATGAGATTATAAAATTTAT 646
consensus_2341#1 ----------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |