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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2411#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence
[CAAACGTAAAGATAAGCTTAAATTGCAAGATTATAGTCCATGGTTTTGTAATTTTTTTGAAAAAAACATAGAAATACCTGGTCAATATACTGGTAAAAGAAAACCTATGCCTCAATATCATGCAAAAATTATAAAGTTTGAATCTACTGTAAAAGTAATGCAATCAATACGGAAACCTATTCGAATTACTATGATTGGTAATGATGCAAAGGATTATCATTTTTTAGTAAAATTTGGAGAAGATTTACGACAAGATCAAAGATTACAACAGTTATTTACTATTATGAACAAAACTTTGTATATTAATGCAGCTTGTAGACAAAGACAATTACTTATTGATACTTATCAGGTGATTCCATTGTCTAAAACAATGGGTCTTATACAATGGATAGATAATACAAGATCTTTAAAAGAGTTAATATATTTCACATTATCAACACAAGAAATAAATCAGTATAATTCTATAATTAAAATGTATCAAGAATGGATACAAAAGGCTGCACCTTCTAAAAAATTGGTACATGAAAAGTATAAAGAAGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTAT]
[+] EMBL BI503368 [CAAACGTAAAGATAAGCTTAAATTGCAAGATTATAGTCCATGGTTTTGTAATTTTTTTGAAAAAAACATAGAAATACCTGGTCAATATACTGGTAAAAGAAAACCTATGCCTCAATATCATGCAAAAATTATAAAGTTTGAATCTACTGTAAAAGTAATGCAATCAATACGGAAACCTATTCGAATTACTATGATTGGTAATGATGCAAAGGATTATCATTTTTTAGTAAAATTTGGAGAAGATTTACGACAAGATCAAAGATTACAACAGTTATTTACTATTATGAACAAAACTTTGTATATTAATGCAGCTTGTAGACAAAGACAATTACTTATTGATACTTATCAGGTGATTCCATTGTCTAAAACAATGGGTCTTATACAATGGATAGATAATACAAGATCTTTAAAAGAGTTAATATATTTCACATTATCAACACAAGAAATAAATCAGTATAATTCTATAATTAAAATGTATCAAGAATGGATACAAAAGGCTGCACCTTCTAAAAAATTGGTACATGAAAAGTATAAAGAAGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTAT]
consensusID : consensus_2411#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence
[AGAAGGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTATAGAAAGTTTCATTATAATGCGTGGAAATTTTATCACTTCATATGCTACTATGTGTATTGCGCATTGGATTTTAGGCATTGGAGATCGGCATTTGCAAAATACTGTAATCGTTATGGATTCAGGACGTTGTTTAGGTATCGATTTTGGGCTAGCTTTTGATGCTGGTGTTGATCAAAAAATACCAGAATTAATGCCTTTTCGTTTAACACCTCAAATTCTGGGTTTATTAAAACCTTTCACTGAAAAAGATCTTTTGAAAACAATAATCCATTCATGCTTTACGAGCGATGAGAAATGAACAAGGACCTATTCTTTCTTGCATGGATATTTTTGTTCATGAACCTTTAAATTGGACGGAAAACGTTAATGAAGCATTAAAAGAAAGTGAAGAAAATGTTACAAATATTGAATGGATACCA]
[-] EMBL BQ103756 [AGAAGGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTATAGAAAGTTTCATTATAATGCGTGGAAATTTTATCACTTCATATGCTACTATGTGTATTGCGCATTGGATTTTAGGCATTGGAGATCGGCATTTGCAAAATACTGTAATCGTTATGGATTCAGGACGTTGTTTAGGTATCGATTTTGGGCTAGCTTTTGATGCTGGTGTTGATCAAAAAATACCAGAATTAATGCCTTTTCGTTTAACACCTCAAATTCTGGGTTTATTAAAACCTTTCACTGAAAAAGATCTTTTGAAAACAATAATCCATTCATGCTTTACGAGCGATGAGAAATGAACAAGGACCTATTCTTTCTTGCATGGATATTTTTGTTCATGAACCTTTAAATTGGACGGAAAACGTTAATGAAGCATTAAAAGAAAGTGAAGAAAATGTTACAAATATTGAATGGATACCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2411#0 CAAACGTAAAGATAAGCTTAAATTGCAAGATTATAGTCCATGGTTTTGTAATTTTTTTGA 60
consensus_2411#1 ------------------------AGAAGGCAGTGGTAAA-----ATATAATGCTTCAGA 31
*** * ** * * **** ** **
consensus_2411#0 AAAAAACATAGAAATACCTGGTCAATATACTGGTAAAAGAAAACCTATGCCTCAATATCA 120
consensus_2411#1 AGTATATACCAAAATG---AACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAA 88
* * * * **** *** ** * ***** *** * * *
consensus_2411#0 TGCAAAAATTATAAAGTTTGAATCTACTGTAAAAGTAATGCAATCA-ATACGGAAACCT- 178
consensus_2411#1 GACACTAATAGTATTATGTCCATCTATAG--AAAGTTTCATTATAATGCGTGGAAATTTT 146
** *** ** * * ***** * ***** ** * ***** *
consensus_2411#0 ---ATTCGAATTACTATGATTGGTAATGATGCAAAGGATTAT---CATTTTTTAGTAAAA 232
consensus_2411#1 ATCACTTCATATGCTACTATGTGTATTG-CGCATTGGATTTTAGGCATTGGAGATCGGCA 205
* * * * *** ** *** ** *** ***** * **** * *
consensus_2411#0 TTTGGAGAAGATTTACGACAAGATCAAAGATTACAACAGTTATTTACTATTATGAACAAA 292
consensus_2411#1 TTTGCAAAATACT---GTAATCGTTATGGATTCAGGACGTTGTTTA--GGTATCGATTTT 260
**** * ** * * * * * * **** *** **** *** *
consensus_2411#0 ACTTTGTATATTAATGCAGCTTGTAGACAAAGACAATTACTTATTGATACTTATCAGGTG 352
consensus_2411#1 GGGCTAGCTTTTGATGCTGGTGTTGATCAAAAAATACCAGA-ATTAATGCCTTTTCG--- 316
* * ** **** * * * **** * * * *** ** * * * *
consensus_2411#0 ATTCCATTGTCTAAAACAATGGGTCTTATACAATGGATAGATAATACAAGATCTTTAAAA 412
consensus_2411#1 --TTTAACACCTCAAATTCTGGGTTTATTAAAACCTTTCACTGAAAAAGATCTTTTGAAA 374
* * ** *** ***** * ** ** * * * * * *** ***
consensus_2411#0 GAGTTAATATATTT-CACATTATCAAC-ACAAGAAATAAATCAGTATA-ATTCTATAATT 469
consensus_2411#1 ACAATAATCCATTCATGCTTTACGAGCGATGAGAAATGAACAAGGACCTATTCTTTCTTG 434
**** *** * *** * * * ****** ** ** * ***** * *
consensus_2411#0 AAAATGTATCAAGAATGGATACAAAAGGCTGCACCTTCTAAAAAATTGGTACATGAAAAG 529
consensus_2411#1 CATGGATATT-----TTTGTTCATGAACCTTTAAATTGGACGGAAAACGTTAATGAAGCA 489
* *** * * ** * ** * ** * ** ** *****
consensus_2411#0 TATAAAGAAGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTT 589
consensus_2411#1 TTAAAAGAAAGTGAAG-AAAATGTTACAAATATTGAATGGATACCA-------------- 534
* ****** * * ***** * * * * * ******
consensus_2411#0 ATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTAT 648
consensus_2411#1 -----------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |