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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2418#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence
[AGAACGCAATATATCGCGTTATCGTCGTCGTTTCGAGGCTTCTTTCACTCGATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACACACACTTATACTCACACATACACATACATACACGCGCTTAGAAATATACGTTCCAGGAGCATCTCCGCCGAAGAAAAGTAGGTACATAACGGGCGTACATAACGTTATCATACGTCGAGGCCAAACCGTGTCTCGTGCCAATCAGAATTGGCGATTCCAGCTCATGGCATTCGAATGCCGATTTAGTGCCTCGTTGCTTTCCCTTCCCACTTACCTTTTTTAATTTCAAATTTCGTTTCATTCAAATCTCTATAAAATATACACGATATATTTATAGAGATTTGAATGAAAAAAAAAAA]
[+] EMBL BI503355 [AGAACGCAATATATCGCGTTATCGTCGTCGTTTCGAGGCTTCTTTCACTCGATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACACACACTTATACTCACACATACACATACATACACGCGCTTAGAAATATACGTTCCAGGAGCATCTCCGCCGAAGAAAAGTAGGTACATAACGGGCGTACATAACGTTATCATACGTCGAGGCCAAACCGTGTCTCGTGCCAATCAGAATTGGCGATTCCAGCTCATGGCATTCGAATGCCGATTTAGTGCCTCGTTGCTTTCCCTTCCCACTTACCTTTTTTAATTTCAAATTTCGTTTCATTCAAATCTCTATAAAATATACACGATATATTTATAGAGATTTGAATGAAAAAAAAAAA]
consensusID : consensus_2418#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 382 fasta sequence
[GATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACATACACACAGACACACAGAGATAGAAACAGTGAAGAAAGAAAAAGAATGAAAAAGAAAGAAAAAAAAGAAGTAACGTGTGAGTGTAAGTGGAGAGATAATAAAATATAAATGTAAAACCTCATTTTCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTATCTCTGTTCTCGGCGAACAACACGAGAGAGAGAGGGAGAGAGAGAGAAAGAAAGAAAAAATATCGGAGAAAGGAAGAAAAATGCAATTGTGCAATTTTACACATACACGTACACGTACTTTGTACAGAAATAATATACA]
[+] EMBL BI516938 [GATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACATACACACAGACACACAGAGATAGAAACAGTGAAGAAAGAAAAAGAATGAAAAAGAAAGAAAAAAAAGAAGTAACGTGTGAGTGTAAGTGGAGAGATAATAAAATATAAATGTAAAACCTCATTTTCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTATCTCTGTTCTCGGCGAACAACACGAGAGAGAGAGGGAGAGAGAGAGAAAGAAAGAAAAAATATCGGAGAAAGGAAGAAAAATGCAATTGTGCAATTTTACACATACACGTACACGTACTTTGTACAGAAATAATATACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2418#0 AGAACGCAATATATCGCGTTATCGTCGTCGTTTCGAGGCTTCTTTCACTCGATCCAAAAT 60
consensus_2418#1 --------------------------------------------------GATCCAAAAT 10
**********
consensus_2418#0 CAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAAT 120
consensus_2418#1 CAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAAT 70
************************************************************
consensus_2418#0 AGATTAGAATACACACACACACTTATACTCACACATACACATACATACACGCGCTTAGAA 180
consensus_2418#1 AGATTAGAATACACACATACACACAGACACACAGAGATAGAAACA---GTGAAGAAAGAA 127
***************** **** * ** **** * * * * *** * ****
consensus_2418#0 ATATACGTTCCAGGAGCATCTCCGCCGAAGAAAAGTAGGTACATAACGGGCGTACATAAC 240
consensus_2418#1 AAAGAATGAAAAAGAAAGAAAAAAAAGAAGTAACGTGTGAGTGTAAGTGGAG-AGATAAT 186
* * * * ** **** ** ** * *** ** * * ****
consensus_2418#0 GTTATCATACGTCGAGGCCAAACCGTGTCTCGTGCCAATCAGAATTGGCGATTCCAGCTC 300
consensus_2418#1 AAAATATAAATGTAAAACCTCATTTTCTCTC-TCTCCCTCTCTCTCTCCCTCTCTCTATC 245
** * * ** * * **** * * ** * * ** **
consensus_2418#0 ATGGCATTCGAATGCCGATTTAGTGCCTCGTTGCTTTCCCTTCCCACTTACCTTTTTTAA 360
consensus_2418#1 TCTGTTCTCGGCGAACAACACGAGAGAGAGAGGGAGAGAGAGAGAAAGAAAGAAA--AAA 303
* *** * * * * * * **
consensus_2418#0 TTTCAAATTTCGTTTCATTCAAATCTCTATAAAATAT-ACACGATATATTTATAGAGA-T 418
consensus_2418#1 TATCGGAGAAAGGAAGAAAAATGCAATTGTGCAATTTTACAC-ATACACGTACACGTACT 362
* ** * * * * * * *** * **** *** * ** * * *
consensus_2418#0 TTGAATGAAAAAAAAAAA-- 436
consensus_2418#1 TTGTACAGAAATAATATACA 382
*** * *** ** * *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |