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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_244#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 583 fasta sequence
[TTCCCGGTCGTTAATTATTTAAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACACTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAAGAAGGAGCCGATAAAATTGATGGCAAATATGGCTCCCAAGATAAGCCTAAACAGTTATTTTGGGAAAAACGTTTGGAAGGTTTAAGAGCATGTGATCCAGACGGAATTGAATTCGATGGAATGGATTTACCAAAAAGTTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGCATTACACGTTTCGTCTCAACCAGTCACGGGACAAACGGGCCGT]
[+] EMBL BI509991 [TTCCCGGTCGTTAATTATTTAAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACACTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAANTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAAGAAGGAGCCGATAAAATTGATGGCAAATATGGCTCCCAAGATAAGCCTAAACAGTTATTTTGGGAAAAACGTTTGGAAGGTTTAAGAGCATGTGATCCAGACGGAATTGAATTCGATGGAATGGATTTACCAAAAAGTTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGCATTACACGTTTCGTCTC ]
[+] EMBL BI514194 [ AAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACACTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAAGAAGGAGCCGATAAAATTGATGGCAAATATGGCTCCCAAGATAAGCCTAAACAGTTATTTTG ]
[+] EMBL BI509183 [ GTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAAGAAGGAGCCGATAAAATTGATGGCAAATATGGCTCCCAAGATAAGCCTAAACAGTTATTTTGGGAAAAACGTTTGGAAGGTTTAAGAGCATGTGATCCAGACGGATTTGAATTCGATGGAATGGATTTACCAAAAAGTTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGCATTACACGTTTCGTCTCAACCAGTCACGGGACAAACGGGCCGT]
consensusID : consensus_244#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 568 fasta sequence
[GGTCGTTAATTATTTAAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACACTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAATTATTTTGGGAAAAACGTTTGGAAGGTTTAAGAGCATGTGATCCAGACGGATTTGAATTCGATGGAATGGATTTACCAAAAAGTTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGCATTACACGTTTCGTCTCAACCAGTCACGGGACAAACGGGTTCGAAGACAGCTTTAGAGAAAAATCCCGGGGTATTTCTTAATCCCGA]
[+] EMBL BI510974 [GGTCGTTAATTATTTAAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACACTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAATTATTTTGGGAAAAACGTTTGGAAGGTTTAAGAGCATGTGATCCAGACGGATTTGAATTCGATGGAATGGATTTACCAAAAAGTTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGC ]
[+] EMBL BI514619 [ TGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAATTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAAAGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGATAAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAAAGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAATTATTTTGGGAAAAACGTTTGGAAGGTTTAAGAGCATGTGATCCAGACGGATTTGAATTCGATGGAATGGATTTACCAAAAAGTTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGCATTACACGTTTCGTCTCAACCAGTCACGGGACAAACGGGTTCGAAGACAGCTTTAGAGAAAAATCCCGGGGTATTTCTTAATCCCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_244#0 TTCCCGGTCGTTAATTATTTAAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACA 60
consensus_244#1 -----GGTCGTTAATTATTTAAATAGTTTCAAAGAACGTGCGAATATATTGAAATAAACA 55
*******************************************************
consensus_244#0 CTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAA 120
consensus_244#1 CTTCTGCAAAATGAATATGTCAGTGGAAAAAAAGAAATATCCATCGGCACTGCCAACAAA 115
************************************************************
consensus_244#0 TTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAA 180
consensus_244#1 TTGGCCGTCCAGAGAAGAGGCTTCGAGAAAAAGCCAAAATCAATTGTCATCTACTGGAAA 175
************************************************************
consensus_244#0 AGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGAT 240
consensus_244#1 AGTTGACGTTTATTATTACAGTCGCGGAGTCAGAAATGATGCATCGTTAGTACCACCGAT 235
************************************************************
consensus_244#0 AAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAA 300
consensus_244#1 AAGACAAACAGCATCTATATTTAAGCAACCAGTAACTATTTATAAGACGCAGGAAGGAAA 295
************************************************************
consensus_244#0 AGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAAGAAGGAGCCGATAAAAT 360
consensus_244#1 AGTAAAAGATATTAAGCATGGAAATCAAGAAAAACCCAAACAA----------------- 338
*******************************************
consensus_244#0 TGATGGCAAATATGGCTCCCAAGATAAGCCTAAACAGTTATTTTGGGAAAAACGTTTGGA 420
consensus_244#1 -------------------------------------TTATTTTGGGAAAAACGTTTGGA 361
***********************
consensus_244#0 AGGTTTAAGAGCATGTGATCCAGACGGAATTGAATTCGATGGAATGGATTTACCAAAAAG 480
consensus_244#1 AGGTTTAAGAGCATGTGATCCAGACGGATTTGAATTCGATGGAATGGATTTACCAAAAAG 421
**************************** *******************************
consensus_244#0 TTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGC 540
consensus_244#1 TTTGAAGCCAGTTGGTCCGTATATTACGGAAGAAACTTTGCTTCAAAGCGTTGCAACTGC 481
************************************************************
consensus_244#0 ATTACACGTTTCGTCTCAACCAGTCACGGGACAAACGGGCCGT----------------- 583
consensus_244#1 ATTACACGTTTCGTCTCAACCAGTCACGGGACAAACGGGTTCGAAGACAGCTTTAGAGAA 541
***************************************
consensus_244#0 ---------------------------
consensus_244#1 AAATCCCGGGGTATTTCTTAATCCCGA 568
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |