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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_26#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 687 fasta sequence
[CATGGTTTAATCAACCTGCCAGAAAATATCGTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTATAATTATAAAAAATAAATTGTCTAACGAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI516396 [CATGGTTTAATCAACCTGCCAGAAAATATCGTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAA ]
[+] EMBL BI514589 [ AGAAAATATCGTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAA ]
[+] EMBL BI515801 [ GTCGTAAACAAAATCGTGT AAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAANNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTA ]
[+] EMBL BI509683 [ GTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGGCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTATAATTATAAAAAATAAATTGTCTAACGAAAAAAAAAA ]
[+] EMBL BI515816 [ GTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGGCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTAT ]
[+] EMBL BI509657 [ TAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTATAATTATAAAAAATAAATTGTCTAACGAAAAATAAAAAAAAAAAAA]
[+] EMBL BI509177 [ AAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGGCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTATAATTATAAAAA ]
[+] EMBL BI509915 [ AAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGGCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTATAATTAT ]
[+] EMBL BI516892 [ AACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTA ]
[+] EMBL BI512905 [ CAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAANNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTAT ]
[+] EMBL BI516193 [ GTAAAAAAAGCCCGTACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAGAAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAATTCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAAAGATAAAAAGNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATTATAAAATTTATAATTATAAAAAATAAA ]
[+] EMBL BI516122 [ ACTGTCGCACCAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCA ]
consensusID : consensus_26#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[CAGAAAATATCGTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGGTAAATAAAAAAACAATTTATTTTTATTTTTAAAATTTTTTATAGTATTTTTTATAATATTTTAATGTTTTATATAATATTTTTAATATTTTATATAAATTATATTTCTATTTATATTTTAACTATATTATTAATTTTAATAATTTAATATTCTTTTAAAATTTTAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAG]
[+] EMBL BI510391 [CAGAAAATATCGTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGGTAAATAAAAAAACAATTTATTTTTATTTTTAAAATTTTTTATAGTATTTTTTATAATATTTTAATGTTTTATATAATATTTTTAATATTTTATATAAATTATATTTCTATTTATATTTTAACTATATTATTAATTTTAATAATTTAATATTCTTTTAAAATTTTAAGACCTGTAAAACTTTTAAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGGTTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGGAATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCAAAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAAAAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCATGCCAGTAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_26#0 ------------------------------------------------------------
consensus_26#1 CAGAAAATATCGTCGTAAACAAAATCGTGTAAAAAAAGCCCGTACTGTCGCACCAAGGTA 60
consensus_26#0 ------------------------------------------------------------
consensus_26#1 AATAAAAAAACAATTTATTTTTATTTTTAAAATTTTTTATAGTATTTTTTATAATATTTT 120
consensus_26#0 ---------------------CATGGTTTAATCAACCTGCCAGAAAATATCGTCGTAAAC 39
consensus_26#1 AATGTTTTATATAATATTTTTAATATTTTATATAAATTATATTTCTATTTATATTTTAAC 180
** **** ** * ** * * ***
consensus_26#0 AAAATCGTGTAA---AAAAAGCCCGTACTGTCGCA-----CCAAGACCTGTAAAACTTTT 91
consensus_26#1 TATATTATTAATTTTAATAATTTAATATTCTTTTAAAATTTTAAGACCTGTAAAACTTTT 240
* ** * * ** ** ** * * * ******************
consensus_26#0 AAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGG 151
consensus_26#1 AAGACCTGTTGTTCATTGTCCAACATTTCGTTATCATACAAAAGTTAGGGCAGGTAAAGG 300
************************************************************
consensus_26#0 TTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGG 211
consensus_26#1 TTTTACATTAGAAGAATTAAAAGCAAGTGGTTTAAATAAAAGATTTGCTAGGACTATTGG 360
************************************************************
consensus_26#0 AATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCA 271
consensus_26#1 AATTGCAGTAGATCCTAGAAGACGTAACAAATCAGTTGAATCTTTGCAAACAAATGCTCA 420
************************************************************
consensus_26#0 AAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAA 331
consensus_26#1 AAGATTAAAAGAATATAAATCAAAATTGATTCTCTTCCCATTAAATGAAAAGAAACCTAA 480
************************************************************
consensus_26#0 AAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCAT 391
consensus_26#1 AAAGGGTGATGCTAGTGAGGAGGAGATGAAACTTGCTACTCAAGTTAAAGGAGAAATCAT 540
************************************************************
consensus_26#0 GCCAGTAAGACACCAAGCACCAGCTAAAGCTAAAGCACGTGTGATTTCTGAAGAAGAAAG 451
consensus_26#1 GCCAGTAAG--------------------------------------------------- 549
*********
consensus_26#0 AAAATTCTCTGCATATGTAACTCTCCGTAAAGCTAGAGCTGATGCTAGATTAGTAGGAAT 511
consensus_26#1 ------------------------------------------------------------
consensus_26#0 TCGTGCGAAACGTGTAAAAGATGCAGCAGAAAATCCAGATGATGTTACCAAAGTTGGTAA 571
consensus_26#1 ------------------------------------------------------------
consensus_26#0 AGATAAAAAGNCTAAAAAATAATATGAAATTTATATTATAAAAAATTAAATATAATAATT 631
consensus_26#1 ------------------------------------------------------------
consensus_26#0 ATAAAATTTATAATTATAAAAAATAAATTGTCTAACGAAAAAAAAAAAAAAAAAAA 687
consensus_26#1 --------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |