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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2622#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 627 fasta sequence
[TTTCTTAGGTATCTATTAGAAGGATTACACGAGGATGTGAACAGGGTGACGGTGAAACCGCAACCGATACACACGGATATTCCTGAAATGTACACAGACAGTCAGAAGGCAGTAGAAAGCTGGAAACGCTACTTACGTAGTGAAGATAGTATGATAGTGGACGTTTTCGTGGGTCAATTACGTTCGTCGTTACATTGCACTTCTTGTGACCATGTGTCAGTCACATTGGATCCTTTCTGGGATCTCAGTTTGCCAATACCGGCTAGAAGTGGTACAGTGAAGTTGAGCCAATGTTTGGAGCATTTCACGCGAGAAGAGGTGCTCGACGGTGATGAAAAACCGACTTGTTCCAAGTGTCAGATGAGGAGAAAGTGCACGAAAAGTTTCAGCATACAAAAGTTCCCGAAAATTCTTGTTATTCACTTAAAACGTTTCTCACCAATGGAACGATTCCGCAGCAAGCTAAATGTGATGGTAGATTTTCCATTGACAGGTTTGGATCTCAGTGCCTTTGCTGCGCCTAGAGTTCCGGGTTGTACGTACAATTTATACGGTGTCGCGAACCATTCGGGCACAACACACTCCGGTCATTACACAGCATATTGTAAGCATCCATACTCGGCAGAA]
[+] EMBL BI508824 [TTTCTTAGGTATCTATTAGAAGGATTACACGAGGATGTGAACAGGGTGACGGTGAAACCGCAACCGATACACACGGATATTCCTGAAATGTACACAGACAGTCAGAAGGCAGTAGAAAGCTGGAAACGCTACTTACGTAGTGAAGATAGTATGATAGTGGACGTTTTCGTGGGTCAATTACGTTCGTCGTTACATTGCACTTCTTGTGACCATGTGTCAGTCACATTGGATCCTTTCTGGGATCTCAGTTTGCCAATACCGGCTAGAAGTGGTACAGTGAAGTTGAGCCAATGTTTGGAGCATTTCACGCGAGAAGAGGTGCTCGACGGTGATGAAAAACCGACTTGTTCCAAGTGTCAGATGAGGAGAAAGTGCACGAAAAGTTTCAGCATACAAAAGTTCCCGAAAATTCTTGTTATTCACTTAAAACGTTTCTCACCAATGGAACGATTCCGCAGCAAGCTAAATGTGATGGTAGATTTTCCATTGACAGGTTTGGATCTCAGTGCCTTTGCTGCGCCTAGAGTTCCGGGTTGTACGTACAATTTATACGGTGTCGCGAACCATTCGGGCACAACACACTCCGGTCATTACACAGCATATTGTAAGCATCCATACTCGGCAGAA]
consensusID : consensus_2622#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence
[TATTGTAAGCATCCATACTCGGCAGAATGGCACGAGTACAATGATAGCCGGGTGTCCGCGGTTCCAGCGCGATCGGTCGTTTCCAACGAAGCCTACGTACTGTTCTACGAGCAGCAGCCTCACAGCTCTCACTTGTAACCTTACGCCATGCTTAGAGTATGAAAAAAAAAAAAAAAAACGACCATCTTGCCTCTCAATACCTCAGTCCAGCATATAGTATAAAAAAAAGAAAACCGACAAAGAGAAAAGAAAAAATTAATAATAAGTGAAACTATACTTTATCGTGTGGTATTGAAAAGCGACTAAACATTGAACGTTGAGGTCGTTTTTATCGAGAATAAAAAACGGATCGTGTGTGTATTNNGTGACTATTGGCGATAATCATGTTTCCATTAAAGCCAAAATTTTGTTTTTCCTCGTGGATATTAGATATATCTCATTCGTGGTCCAGTCATTTTTACTTCGGCTTCTTTAGAAACCAGACACTTTAGTGCATTTTCCGATACGNAGGTTTATTACAAAATAGTCCTCTGAAAGATTAATAAGATGCTTAATATGAGCAAAACATTTTTCAGAAGTT]
[+] EMBL BI508930 [TATTGTAAGCATCCATACTCGGCAGAATGGCACGAGTACAATGATAGCCGGGTGTCCGCGGTTCCAGCGCGATCGGTCGTTTCCAACGAAGCCTACGTACTGTTCTACGAGCAGCAGCCTCACAGCTCTCACTTGTAACCTTACGCCATGCTTAGAGTATGAAAAAAAAAAAAAAAAACGACCATCTTGCCTCTCAATACCTCAGTCCAGCATATAGTATAAAAAAAAGAAAACCGACAAAGAGAAAAGAAAAAATTAATAATAAGTGAAACTATACTTTATCGTGTGGTATTGAAAAGCGACTAAACATTGAACGTTGAGGTCGTTTTTATCGAGAATAAAAAACGGATCGTGTGTGTATTNNGTGACTATTGGCGATAATCATGTTTCCATTAAAGCCAAAATTTTGTTTTTCCTCGTGGATATTAGATATATCTCATTCGTGGTCCAGTCATTTTTACTTCGGCTTCTTTAGAAACCAGACACTTTAGTGCATTTTCCGATACGNAGGTTTATTACAAAATAGTCCTCTGAAAGATTAATAAGATGCTTAATATGAGCAAAACATTTTTCAGAAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2622#0 TTTCTTAGGTATCTAT---TAGAAGGATTACACGAGGATGTGAACAGGGTGACGGTGAAA 57
consensus_2622#1 TATTGTAAGCATCCATACTCGGCAGAATGGCACGAGTACA-----ATGATAGCCGGGTGT 55
* * ** * *** ** * ** ** ****** * * * * * * *
consensus_2622#0 CCGCAA--CCGATACACACGGATATTCCTGA-AATGTACACAGACAGTCAGAAGGCAGTA 114
consensus_2622#1 CCGCGGTTCCAGCGCGATCGGTCGTTTCCAACGAAGCCTACGTACTGTTCTACG--AGCA 113
**** ** * *** ** * * * * ** ** ** * * ** *
consensus_2622#0 GAAAGCTGGAAACGCT-ACTTACGTAGTGAAGATAGTATGATAGTGGACGTTTTCGTGGG 173
consensus_2622#1 GCAGCCTCACAGCTCTCACTTGT------AACCTTACGCCATGCTTAGAGTATGAAAAAA 167
* * ** * * ** **** ** * ** * ** *
consensus_2622#0 TCAATTACGTTCGTCGTTACATTGCACTTCTTGTGACCATGTGTCAGTCACATTGGATCC 233
consensus_2622#1 AAAAAAAAAAACGAC----CATCTTGCCTCT-----CAATACCTCAGTC-CAGCATATAG 217
** * ** * *** * *** * ** ****** ** **
consensus_2622#0 TTTCTGGGATCTCAGTTTGCCAATACCGGCTAGAAGTGGTACAGTGAAGTTGAGCCAATG 293
consensus_2622#1 TATAAAAAAAAGAAAACCGACAAAGAGAAAAGAAAAAATTAATAATAAGTGAAACTATAC 277
* * * * * *** ** ** **** * * *
consensus_2622#0 TTTGGAGCATTTCACGCGAGAAGAGGTGCTCGACGGTGA-TGAAAAACCGACTTGTTCCA 352
consensus_2622#1 TTTATCGTGTGGTATT---GAAAAGCGACTAAACATTGAACGTTGAGGTCGTTTTTATCG 334
*** * * * *** ** ** ** *** * * ** * *
consensus_2622#0 AGTGTCAGATGAGGAGAAAGTGCACGAAAAGTTTCAGCATACAAAAGTTCCCGAAAATTC 412
consensus_2622#1 AGAATAAAAAACGGATCGTGTGTGTATTNNGTGACTATTGGCGATAATC-----ATGTTT 389
** * * * *** *** ** * * * * * * **
consensus_2622#0 TTGTTATTCACTTAAAACGTTTCTCACCAATGGAACGATTCCGCAGCAAGCTAAATGTGA 472
consensus_2622#1 CCATTA--AAGCCAAAATTTTGTTTTTCCTCGTGGATATTAGATA-TATCTCATTCGTGG 446
*** * **** ** * * * *** * * * ***
consensus_2622#0 T--GGTAGATTTTCCATTGACAGGTTTGGATCTCAGTGCCTTTGCTGCGCCTAGAGTTCC 530
consensus_2622#1 TCCAGTCATTTTTACTTCGGCTTCTTTAGAAACCAGACACTTTAGTGCATTT-----TCC 501
* ** **** * * * * *** ** *** **** *** * ***
consensus_2622#0 GGGTTGTACGTACAATTTATA-CGGTGTCGCGAACCATTCGGGCACAACACACTCCGGTC 589
consensus_2622#1 GATACGNAGGTTTATTACAAAATAGTCCTCTGAAAGATT----AATAAGATGCTT-AATA 556
* * * ** * * * * ** *** *** * ** * ** *
consensus_2622#0 ATTACACAGCATATTGTAAGCATCCATACTCGGCAGAA 627
consensus_2622#1 TGAGCAAAACATTTTTCAGAAGTT-------------- 580
** * *** ** * *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |