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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2764#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 583 fasta sequence
[ACTATCACCAAATCCGATCTTCTCTTAGGTTCTTCTTTAATTATTCTTTGTGGAGGAAGACGAGACGAGAGTCTCAACCACGGCACCAAAATTGAGCTGGACTTGCACCAACGGGCCGCCGGCCACTTTATGAGAGCCGGCGGCAACATGTGCGACGGCTCGTTCACCGAGACCCTGCGCGGTATGCAGGGTATGCCGGGTACGTCACCACCCGGTGGCGCGGGGGTCGGCCCCATGGGGGTTGGCCTCGGCAGCCCCCTCGGCCCGAGCCCGAAGAAGGCGCAGGTGGAGCACATCAAGAGGCCGATGAACGCGTTCATGGTCTGGTCCCGGCTCCAGCGGCGGAAGATCGCCCAGGAGAATCCCAAGATGCATAATTCAGAGATATCCAAGAGACTCGGCGCCGAATGGAAACTCTTAACGGAGGATGAGAAACGACCCTTCATCGATCAGGCAAAAAGGTTACGGGCCCAACACATGAAGGAATATCCAGATTATAAATACAGGCCTAGAAGAAAACCGAAAACTTTACGGAAAGAAGGATATCCTTACAGTATTCCCTACCCTAGCGTGCCTATGGATG]
[+] EMBL BI509277 [ACTATCACCAAATCCGATCTTCTCTTAGGTTCTTCTTTAATTATTCTTTGTGGAGGAAGACGAGACGAGAGTCTCAACCACGGCACCAAAATTGAGCTGGACTTGCACCAACGGGCCGCCGGCCACTTTATGAGAGCCGGCGGCAACATGTGCGACGGCTCGTTCACCGAGACCCTGCGCGGTATGCAGGGTATGCCGGGTACGTCACCACCCGGTGGCGCGGGGGTCGGCCCCATGGGGGTTGGCCTCGGCAGCCCCCTCGGCCCGAGCCCGAAGAAGGCGCAGGTGGAGCACATCAAGAGGCCGATGAACGCGTTCATGGTCTGGTCCCGGCTCCAGCGGCGGAAGATCGCCCAGGAGAATCCCAAGATGCATAATTCAGAGATATCCAAGAGACTCGGCGCCGAATGGAAACTCTTAACGGAGGATGAGAAACGACCCTTCATCGATCAGGCAAAAAGGTTACGGGCCCAACACATGAAGGAATATCCAGATTATAAATACAGGCCTAGAAGAAAACCGAAAACTTTACGGAAAGAAGGATATCCTTACAGTATTCCCTACCCTAGCGTGCCTATGGATG]
consensusID : consensus_2764#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence
[AGGAGAGAAGTGTATTTGGGGTGGAGTACAGTGAACAACTAAGAAAGAAAGAAAGAAAGACTCTAGTGGACGGCTATGACAGTGCAGTGACTCGCTGATTTGTTATTTGTTTTTTCTGTTTCGACACTATCACCAAATCCGATCTTCTCTTAGNTTCTTCTTTAATTATTCTTTGTGGAGGAAGACGAGACGAGAGTCTCAACCACGGCACCAAAATTGAGCTGGACTTGCACCAACGGGCCGCCGGCCACTTTATGAGGCGCCGAATGGAAACTCTTAACGGAGGATGAGAAACGACCCTTCATCGATCAGGCAAAAAGGTTACGGGCTCAACACATGAAGGAATATCCAGATTATAAATACAGNCCTAGAAGAAAACCGAAAACTTTACGGAAAGAAGNANATCCTTACAGTATTCCCTACCCTAGCGTGCCTATGGATGC]
[+] EMBL BI509543 [AGGAGAGAAGTGTATTTGGGGTGGAGTACAGTGAACAACTAAGAAAGAAAGAAAGAAAGACTCTAGTGGACGGCTATGACAGTGCAGTGACTCGCTGATTTGTTATTTGTTTTTTCTGTTTCGACACTATCACCAAATCCGATCTTCTCTTAGNTTCTTCTTTAATTATTCTTTGTGGAGGAAGACGAGACGAGAGTCTCAACCACGGCACCAAAATTGAGCTGGACTTGCACCAACGGGCCGCCGGCCACTTTATGAGGCGCCGAATGGAAACTCTTAACGGAGGATGAGAAACGACCCTTCATCGATCAGGCAAAAAGGTTACGGGCTCAACACATGAAGGAATATCCAGATTATAAATACAGNCCTAGAAGAAAACCGAAAACTTTACGGAAAGAAGNANATCCTTACAGTATTCCCTACCCTAGCGTGCCTATGGATGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2764#0 ACTATCACCAAATCCGATCTTCTCTTAGGTTCTTCTTTAATTATTCTTTGTGGAGGAAGA 60
consensus_2764#1 ------------------------------------------------------------
consensus_2764#0 CGAGACGAGAGTCTCAACCACGGCACCAAAATTGAGCTGGACTTGCACCAACGGGCCGCC 120
consensus_2764#1 ------------------------------------------------------------
consensus_2764#0 GGCCACTTTATGAGAGCCGGCGGCAACATGTGCGACGGCTCGTTCACCGAGACCCTGCGC 180
consensus_2764#1 ----AGGAGAGAAGTGTATTTGGGGTGGAGTACAGTGAACAACTAAGAAAGAAAGAAAGA 56
* * ** * ** ** * * * * *** *
consensus_2764#0 GGTATGCAGGGTATGCCGGGTACGTCACCACCCGGTGGCGCGGGGGTCGGCCCCATGGGG 240
consensus_2764#1 AAGACTCTAGTG--GACGGCTATG--ACAGTGCAGTGACTCGCTGATTTGTTATTTGTTT 112
* * * * *** ** * ** * *** * ** * * * **
consensus_2764#0 GTTG-GCCTCGGCAGCCCCCTCGG-CCCGAGCCCGAAGAAGGCGCAGGTGGAGCACATCA 298
consensus_2764#1 TTTCTGTTTCGACACTATCACCAAATCCGATCTTCTCTTAGNTTCTTCTTTAATTATTCT 172
** * *** ** * * **** * ** * * * **
consensus_2764#0 AGAGGCCGATGAACGCGTTCATGGTCTGGTCCCGGCTCCAGCGGCGGAAGATCGCCCAGG 358
consensus_2764#1 TTGTGGAGGAAGACGAGACGAGAGTCT-----CAACCACGGCACC--AAAATTGAGCTGG 225
* * *** * * **** * * * ** * ** ** * * **
consensus_2764#0 AGAATCCCAAGATGCATAATTCAGAGATATCCAAGAGACTCGGCGCCGAATGGAAACTCT 418
consensus_2764#1 A-----CTTGCACCAACGGGCCGCCGG---CCACTTTATGAGGCGCCGAATGGAAACTCT 277
* * * * * * *** * *******************
consensus_2764#0 TAACGGAGGATGAGAAACGACCCTTCATCGATCAGGCAAAAAGGTTACGGGCCCAACACA 478
consensus_2764#1 TAACGGAGGATGAGAAACGACCCTTCATCGATCAGGCAAAAAGGTTACGGGCTCAACACA 337
**************************************************** *******
consensus_2764#0 TGAAGGAATATCCAGATTATAAATACAGGCCTAGAAGAAAACCGAAAACTTTACGGAAAG 538
consensus_2764#1 TGAAGGAATATCCAGATTATAAATACAGNCCTAGAAGAAAACCGAAAACTTTACGGAAAG 397
**************************** *******************************
consensus_2764#0 AAGGATATCCTTACAGTATTCCCTACCCTAGCGTGCCTATGGATG- 583
consensus_2764#1 AAGNANATCCTTACAGTATTCCCTACCCTAGCGTGCCTATGGATGC 443
*** * ***************************************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |