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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 2797 cluster # 2797       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2797#0 length = 471 sequences # 1  
 consensus_2797#1 length = 321 sequences # 1  
consensusID : consensus_2797#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 471
fasta sequence 
                              [TTTTTTTCGATAAAGAGAGTGCTTTTAAGAAGAATTATCACATGTGAGAAAAAGATGAGGAAGAGGCGAGTGTCTCCATCAATTCGAGCCATCAATTTTTTTTTTTCCTCTTCCTTTCAAAGCCAAAACGAGCTAATACGATCCTTCGCTCTTTTAAGCCGATCTTTTACGCGTTCTATACTTTTTTATTTTTTATTTTTTCCACGAAACGTCATCTAACGCAATATCAACTTTGCTTTCGAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTCTCTCTCTTCCGACCAATGGTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACCATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCTCCCCCGAATTTAATTAATCGATCATTGAATAAAGGCGGCGGCCGTCACGTGAAAAAAGGGAACACGTGTCTC]

[+] EMBL BI946517             [TTTTTTTCGATAAAGAGAGTGCTTTTAAGAAGAATTATCACATGTGAGAAAAAGATGAGGAAGAGGCGAGTGTCTCCATCAATTCGAGCCATCAATTTTTTTTTTTCCTCTTCCTTTCAAAGCCAAAACGAGCTAATACGATCCTTCGCTCTTTTAAGCCGATCTTTTACGCGTTCTATACTTTTTTATTTTTTATTTTTTCCACGAAACGTCATCTAACGCAATATCAACTTTGCTTTCGAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTCTCTCTCTTCCGACCAATGGTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACCATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCTCCCCCGAATTTAATTAATCGATCATTGAATAAAGGCGGCGGCCGTCACGTGAAAAAAGGGAACACGTGTCTC]




>consensus_2797#0
TTTTTTTCGATAAAGAGAGTGCTTTTAAGAAGAATTATCACATGTGAGAAAAAGATGAGG
AAGAGGCGAGTGTCTCCATCAATTCGAGCCATCAATTTTTTTTTTTCCTCTTCCTTTCAA
AGCCAAAACGAGCTAATACGATCCTTCGCTCTTTTAAGCCGATCTTTTACGCGTTCTATA
CTTTTTTATTTTTTATTTTTTCCACGAAACGTCATCTAACGCAATATCAACTTTGCTTTC
GAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTCTCTCTCTTCCGAC
CAATGGTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACCATTTTCCAAC
CACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCTCCCCCGAATTTAATTAATCGA
TCATTGAATAAAGGCGGCGGCCGTCACGTGAAAAAAGGGAACACGTGTCTC

consensusID : consensus_2797#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 321
fasta sequence 
                              [TTACGCGTTCTATACTTTTTTATTTTTTTTTTCCACAAAACGTTATTTAACGCGACATCAACTTTGCTTTCGAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTTTCCTTTCTTCTCTCTCTTCCGACCAATGTTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACCATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCCTCCCCCGAATTTAATTAATCGATTATTGAAATAAAGTCGTCGTCGTCACGTGAAAAAAAGAGAAACACGTGTCTCGTATTT]

[+] EMBL BI511286             [TTACGCGTTCTATACTTTTTTATTTTTTTTTTCCACAAAACGTTATTTAACGCGACATCAACTTTGCTTTCGAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTTTCCTTTCTTCTCTCTCTTCCGACCAATGTTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACCATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCCTCCCCCGAATTTAATTAATCGATTATTGAAATAAAGTCGTCGTCGTCACGTGAAAAAAAGAGAAACACGTGTCTCGTATTT]




>consensus_2797#1
TTACGCGTTCTATACTTTTTTATTTTTTTTTTCCACAAAACGTTATTTAACGCGACATCA
ACTTTGCTTTCGAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTTTC
CTTTCTTCTCTCTCTTCCGACCAATGTTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACA
AGAAAGACACCATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCC
TCCCCCGAATTTAATTAATCGATTATTGAAATAAAGTCGTCGTCGTCACGTGAAAAAAAG
AGAAACACGTGTCTCGTATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2797#0      TTTTTTTCGATAAAGAGAGTGCTTTTAAGAAGAATTATCACATGTGAGAAAAAGATGAGG 60
consensus_2797#1      ------------------------------------------------------------
                                                                                  

consensus_2797#0      AAGAGGCGAGTGTCTCCATCAATTCGAGCCATCAATTTTTTTTTTTCCTCTTCCTTTCAA 120
consensus_2797#1      ------------------------------------------------------------
                                                                                  

consensus_2797#0      AGCCAAAACGAGCTAATACGATCCTTCGCTCTTTTAAGCCGATCTTTTACGCGTTCTATA 180
consensus_2797#1      ----------------------------------------------TTACGCGTTCTATA 14
                                                                    **************

consensus_2797#0      CTTTTTTATTTTTTATTTTTTCCACGAAACGTCATCTAACGCAATATCAACTTTGCTTTC 240
consensus_2797#1      CTTTTTTATTTTTT---TTTTCCACAAAACGTTATTTAACGCGACATCAACTTTGCTTTC 71
                      **************   ******** ****** ** ****** * ***************

consensus_2797#0      GAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTT----------CTCT 290
consensus_2797#1      GAAAGTATCGATTTTTCGAAACACTTTCTCTTTCCTTTCCTTTCTTTTCCTTTCTTCTCT 131
                      **********************************************          ****

consensus_2797#0      CTCTTCCGACCAATGGTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACC 350
consensus_2797#1      CTCTTCCGACCAATGTTTCTCTTTCTTTTTTTTCCCCCGAGCGGAGACAAGAAAGACACC 191
                      *************** ********************************************

consensus_2797#0      ATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTC-TCCCCCGAATT 409
consensus_2797#1      ATTTTCCAACCACGTTCAACAACGTTGCTTGCTCTCCCCGGCTCTCTCCTCCCCCGAATT 251
                      ************************************************ ***********

consensus_2797#0      TAATTAATCGATCATTGAATAAAGGCGGCGGCCGTCACGTGAAAAAAGGG--AACACGTG 467
consensus_2797#1      TAATTAATCGATTATTGAAATAAAGTCGTCGTCGTCACGTGAAAAAAAGAGAAACACGTG 311
                      ************ ******  ** *  *  * *************** *   ********

consensus_2797#0      TCTC------ 471
consensus_2797#1      TCTCGTATTT 321
                      ****


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)