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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 2800 cluster # 2800       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2800#0 length = 483 sequences # 1  
 consensus_2800#1 length = 473 sequences # 1  
consensusID : consensus_2800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence 
                              [CTCCTAGTATTGCTGACGAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGTGTAACGAGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTTGCTGGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCTCCAAGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAATCCAGATCTCCAAGCGTAACAAGCACCACAGAAGTAAAAGAACCATCAGAAAAATCAAAGTCACCAAGTATTGCTGGTGAAGTTGTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCCAGTGTAACAAGTGTCACAGCAGAAGAAAAAGAACCATCAGAAAAATCAAAGTCTCCCAGTGTTGCTGGAGAAAAGCCAGAATTAAAGGATGTCGAAACAA]

[+] EMBL BI513411             [CTCCTAGTATTGCTGACGAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGTGTAACGAGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTTGCTGGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCTCCAAGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAATCCAGATCTCCAAGCGTAACAAGCACCACAGAAGTAAAAGAACCATCAGAAAAATCAAAGTCACCAAGTATTGCTGGTGAAGTTGTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCCAGTGTAACAAGTGTCACAGCAGAAGAAAAAGAACCATCAGAAAAATCAAAGTCTCCCAGTGTTGCTGGAGAAAAGCCAGAATTAAAGGATGTCGAAACAA]




>consensus_2800#0
CTCCTAGTATTGCTGACGAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAA
AATCTAGATCTCCAAGTGTAACGAGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAAT
CAAAGTCGCCCAGTGTTGCTGGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACG
TAGAAAAATCCAGATCTCCAAGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAA
TAGAAAAATCCAGATCTCCAAGCGTAACAAGCACCACAGAAGTAAAAGAACCATCAGAAA
AATCAAAGTCACCAAGTATTGCTGGTGAAGTTGTTGATCTGAAAGATGTTGATAAAAAAG
AAATTGAAAAATCAAGATCTCCCAGTGTAACAAGTGTCACAGCAGAAGAAAAAGAACCAT
CAGAAAAATCAAAGTCTCCCAGTGTTGCTGGAGAAAAGCCAGAATTAAAGGATGTCGAAA
CAA

consensusID : consensus_2800#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 473
fasta sequence 
                              [ACAACAGAAGTAAAAGAACCATCAGATAAATCAAAGTCACCCAGTATTGCTGGTGAAATTGTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCTAGCGTAACAAGTGTCACAGCAGAAGAGAAAGAGTTATTAGATAAATCAAAGACTCCTAGTATTGCTGACGAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGTGTAACGAGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTTGCTGGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCTCCAAGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAAAAAACACAAGCGAAAAGCAAAGCACTAATCATGATTGTGTGTAAACGTAAAATTAAAAAAAA]

[+] EMBL BI517216             [ACAACAGAAGTAAAAGAACCATCAGATAAATCAAAGTCACCCAGTATTGCTGGTGAAATTGTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCTAGCGTAACAAGTGTCACAGCAGAAGAGAAAGAGTTATTAGATAAATCAAAGACTCCTAGTATTGCTGACGAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGTGTAACGAGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTTGCTGGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCTCCAAGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAAAAAACACAAGCGAAAAGCAAAGCACTAATCATGATTGTGTGTAAACGTAAAATTAAAAAAAA]




>consensus_2800#1
ACAACAGAAGTAAAAGAACCATCAGATAAATCAAAGTCACCCAGTATTGCTGGTGAAATT
GTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCTAGCGTAACA
AGTGTCACAGCAGAAGAGAAAGAGTTATTAGATAAATCAAAGACTCCTAGTATTGCTGAC
GAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGT
GTAACGAGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTT
GCTGGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCT
CCAAGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAAAAAACACAA
GCGAAAAGCAAAGCACTAATCATGATTGTGTGTAAACGTAAAATTAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2800#0      -------------------------------------CTCCTAGTATTGCTGACGAAAAG 23
consensus_2800#1      ACAACAGAAGTAAAAGAACCATCAGATAAATCAAAGTCACCCAGTATTGCTGGTGAAATT 60
                                                           * ** **********  ****  

consensus_2800#0      CCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGTGTAACG 83
consensus_2800#1      GTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCTAGCGTAACA 120
                         **  * *********** * ****** *  ******** ******** ** ***** 

consensus_2800#0      AGTGTCACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTTGCTGGT 143
consensus_2800#1      AGTGTCACAGCAGAAGAGAAAGAGTTATTAGATAAATCAAAGACTCCTAGTATTGCTGAC 180
                      ******** * ***    *****  *** ************* * ** *** ******  

consensus_2800#0      GAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCTCCAAGT 203
consensus_2800#1      GAAAAGCCAGAATTAAAAGATGTTGAGATAAAAGATAAAGAAAAATCTAGATCTCCAAGT 240
                      *** * ********************  ** ****   ********* ************

consensus_2800#0      GTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAATCCAGATCTCCAAGC 263
consensus_2800#1      GTAACGA---------------------------------------------------GT 249
                      ***** *                                                   * 

consensus_2800#0      GTAACAAGCACCACAGAAGTAAAAGAACCATCAGAAAAATCAAAGTCACCAAGTATTGCT 323
consensus_2800#1      GT------CACTGGAGAGCCAAAAGAAGTATCAGATAAATCAAAGTCGCCCAGTGTTGCT 303
                      **      ***   ***   *******  ****** *********** ** *** *****

consensus_2800#0      GGTGAAGTTGTTGATCTGAAAGATGTTGATAAAAAAGAAATTGAAAAATCAAGATCTCCC 383
consensus_2800#1      GGTGAAGAACCAGAATTAAAAGATGTTGAAGTACAAGACGTAGAAAAATCCAGATCTCCA 363
                      *******     **  * ***********   * ****  * ******** ******** 

consensus_2800#0      AGTGTAACAAGTGTCACAGCAGAAGA------AAAAGAACCATCAGAAAAATCAAAGTCT 437
consensus_2800#1      AGTGTAACAACAGAAATAAAAGACATTGACATGAAAGAAATAGAAAAAAAAACACAAGCG 423
                      **********  *  * *  ***          ******  *  * ***** ** *  * 

consensus_2800#0      CCCAGTGTTGCTGGAGAAAAGCCAGAAT-TAAAGG--ATGTCGAAACAA- 483
consensus_2800#1      AAAAGCAAAGCACTAATCATGATTGTGTGTAAACGTAAAATTAAAAAAAA 473
                         **    **   *   * *   *  * **** *  *  *  *** **


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)