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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2842#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence
[CTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCTGAGATGTATCCATTGCTCGCTGGTGTTTAACTTAGTTGTAGCAGTTTGCAAGCTCGCATCATGACAATTAAGGAAGATACTTCAGGAATTGTCTGCTGTTATTTGCCTTCTGCTTTCTTGAATCATCATCACGAGTGGTAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGATGTAATTAATATTTCATTATATACTATACAACACAGAAAAAAA]
[+] EMBL BI506739 [CTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCTGAGATGTATCCATTGCTCGCTGGTGTTTAACTTAGTTGTAGCAGTTTGCAAGCTCGCATCATGACAATTAAGGAAGATACTTCAGGAATTGTCTGCTGTTATTTGCCTTCTGCTTTCTTGAATCATCATCACGAGTGGTAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGATGTAATTAATATTTCATTATATACTATACAACACAGAAAAAAA]
consensusID : consensus_2842#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence
[AACCAAAATACCTGCACTTTTCGATAACTGTTACTCTAGACGAAAAACTTTCATTATATGCTTCTATTTCTAGAATGCTATTTCGCCTATCTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCCATCATCACGAGTGGAAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGAT]
[-] EMBL BE844571 [AACCAAAATACCTGCACTTTTCGATAACTGTTACTCTAGACGAAAAACTTTCATTATATGCTTCTATTTCTAGAATGCTATTTCGCCTATCTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCCATCATCACGAGTGGAAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2842#0 ------------------------------------------------------------
consensus_2842#1 AACCAAAATACCTGCACTTTTCGATAACTGTTACTCTAGACGAAAAACTTTCATTATATG 60
consensus_2842#0 ------------------------------CTAAAACATTTTTTTGAATAAAATAGACAA 30
consensus_2842#1 CTTCTATTTCTAGAATGCTATTTCGCCTATCTAAAACATTTTTTTGAATAAAATAGACAA 120
******************************
consensus_2842#0 AATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCC 90
consensus_2842#1 AATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCC 180
************************************************************
consensus_2842#0 GTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAA 150
consensus_2842#1 GTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAA 240
************************************************************
consensus_2842#0 CAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCTGAGATGTATCCAT 210
consensus_2842#1 CAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGC-------------- 286
**********************************************
consensus_2842#0 TGCTCGCTGGTGTTTAACTTAGTTGTAGCAGTTTGCAAGCTCGCATCATGACAATTAAGG 270
consensus_2842#1 ------------------------------------------------------------
consensus_2842#0 AAGATACTTCAGGAATTGTCTGCTGTTATTTGCCTTCTGCTTTCTTGAATCATCATCACG 330
consensus_2842#1 --------------------------------------------------CATCATCACG 296
**********
consensus_2842#0 AGTGGTAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGT 390
consensus_2842#1 AGTGGAAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGT 356
***** ******************************************************
consensus_2842#0 CTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAA 450
consensus_2842#1 CTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAA 416
************************************************************
consensus_2842#0 GCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAA 510
consensus_2842#1 GCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAA 476
************************************************************
consensus_2842#0 AAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGATGTAATTA 570
consensus_2842#1 AAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGAT------- 529
*****************************************************
consensus_2842#0 ATATTTCATTATATACTATACAACACAGAAAAAAA 605
consensus_2842#1 -----------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |