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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 2853 cluster # 2853       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2853#0 length = 507 sequences # 1  
 consensus_2853#1 length = 485 sequences # 1  
consensusID : consensus_2853#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 507
fasta sequence 
                              [TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTAGTAAAGTTTGGAATGCAGAAAGTCAAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCAACAAATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATCTACTAAAACTAACATAGAAAAAGTAAGATATG]

[+] EMBL BI512983             [TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTAGTAAAGTTTGGAATGCAGAAAGTCAAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCAACAAATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATCTACTAAAACTAACATAGAAAAAGTAAGATATG]




>consensus_2853#0
TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATC
TTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACAT
TTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTG
TTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTA
CTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTG
GNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTAGTAAAGTTTGGAATGCAGAAAGTC
AAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCAACAA
ATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATCTACTA
AAACTAACATAGAAAAAGTAAGATATG

consensusID : consensus_2853#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence 
                              [TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAACATCAAATATAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAAATTATATCAAAGAGTATATATTGTGATGATAAATATTTAATCTTAATCTGTGGATTTGGAAATTGT]

[-] EMBL BI510670             [TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAACATCAAATATAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAAATTATATCAAAGAGTATATATTGTGATGATAAATATTTAATCTTAATCTGTGGATTTGGAAATTGT]




>consensus_2853#1
TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAA
TCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAAC
ATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAG
TGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACG
TACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCT
TGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAA
CATCAAATATAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAAA
TTATATCAAAGAGTATATATTGTGATGATAAATATTTAATCTTAATCTGTGGATTTGGAA
ATTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2853#0      --TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAA 58
consensus_2853#1      TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAA 60
                        * * *** **************************************************

consensus_2853#0      TCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAAC 118
consensus_2853#1      TCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAAC 120
                      ************************************************************

consensus_2853#0      ATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAG 178
consensus_2853#1      ATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAG 180
                      ************************************************************

consensus_2853#0      TGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACG 238
consensus_2853#1      TGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACG 240
                      ************************************************************

consensus_2853#0      TACTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCT 298
consensus_2853#1      TACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCT 300
                      *********   ************************************************

consensus_2853#0      TGGNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTA-GTAAAGTT-TGGAATGCAGAA 356
consensus_2853#1      TGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAA 360
                      *** ****************************    **  *    ** *   **    **

consensus_2853#0      AGTCAAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCA 416
consensus_2853#1      CATCAAATA-TAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAA 419
                        ***** * * ***  *  *  *   *  **   **   ****  *  **   * *  *

consensus_2853#0      ACAA-ATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATC 475
consensus_2853#1      ATTATATCAAAGAGTATATATT-GTGAT---GATAAATATTTAATCTTAATCTGTGGATT 475
                      *  * ** *   * ** ** ** * ***     *  ** *  *  ***      *  ** 

consensus_2853#0      TACTAAAACTAACATAGAAAAAGTAAGATATG 507
consensus_2853#1      TG--GAAATTGT-------------------- 485
                      *    *** *


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)