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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 447 fasta sequence
[CATTTTTCGCGTTTTATACTTTTCTTTTCTCTCCATTGGTTATTCTATTATTAATATGTTCCTATCTATGTCGCTGTATCATAGAGATCATTTTAAGGATACAATTAAAGGATAAATTCGTGGGTCTCCTTGATGGGATGGACTGCGTTTGGGCGGTAGAACAATCATCGGCACTTTCTGTGAATAATATCCTTATGATTTTAGAAAAAGATGCTCGTCACTCGAATATCAACTTCCTGGAGAGTTTTCGTGATTTGGTGAGGAATCGCATAGTATGCTCGTCTTTTGAAAAGCTGTTGTACAAGAGAAAGAGAAAATTTGGTTATTATTTCTGGGAGAGAAGTGAAGAGATCGATCTGAGAGAACGTATCAGATGGTTGGAATACGAGCGCACGAATTGCGACGGATCCTGTGATAATATTTACAATAGTCATCTGAAGAAAGTTC]
[+] EMBL BI516740 [CATTTTTCGCGTTTTATACTTTTCTTTTCTCTCCATTGGTTATTCTATTATTAATATGTTCCTATCTATGTCGCTGTATCATAGAGATCATTTTAAGGATACAATTAAAGGATAAATTCGTGGGTCTCCTTGATGGGATGGACTGCGTTTGGGCGGTAGAACAATCATCGGCACTTTCTGTGAATAATATCCTTATGATTTTAGAAAAAGATGCTCGTCACTCGAATATCAACTTCCTGGAGAGTTTTCGTGATTTGGTGAGGAATCGCATAGTATGCTCGTCTTTTGAAAAGCTGTTGTACAAGAGAAAGAGAAAATTTGGTTATTATTTCTGGGAGAGAAGTGAAGAGATCGATCTGAGAGAACGTATCAGATGGTTGGAATACGAGCGCACGAATTGCGACGGATCCTGTGATAATATTTACAATAGTCATCTGAAGAAAGTTC]
consensusID : consensus_2928#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence
[TATTTACAATAGTCATCTGAAGAAAGTTCTATGGAATATTTGCAACCAACCANNNACCGGAGAATCACACAGCATCCTGGGAGATCTTAATTGGAAAATGTTGTCCCAGATTGAGTCATCATTATCTTCGACGTATGGAGGAACGTTTGACGAATAAAATCAAGATTCCCATTTTATTTCGCGTCCATCATTCTTTAGGCGATGGTATGGCACTTCTAAAGTTCTTTAGAGATGTTATTATTGACAAGGAACCAGTTCCGGAAACATTCTTACAGTTGGATAGCAGTTTGAAAATGAAGAACGAGA]
[+] EMBL BI508103 [TATTTACAATAGTCATCTGAAGAAAGTTCTATGGAATATTTGCAACCAACCANNNACCGGAGAATCACACAGCATCCTGGGAGATCTTAATTGGAAAATGTTGTCCCAGATTGAGTCATCATTATCTTCGACGTATGGAGGAACGTTTGACGAATAAAATCAAGATTCCCATTTTATTTCGCGTCCATCATTCTTTAGGCGATGGTATGGCACTTCTAAAGTTCTTTAGAGATGTTATTATTGACAAGGAACCAGTTCCGGAAACATTCTTACAGTTGGATAGCAGTTTGAAAATGAAGAACGAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2928#0 CATTTTTCGCGTTTTATACTTTTCTTTTCTCTCCATTGGTTATTCTATTATTAAT-ATGT 59
consensus_2928#1 ---TATTTACAATA-GTCATCTGAAGAAAGTTCTATGGAATATT-TGCAACCAACCANNN 55
* ** * * * * * ** ** * **** * * ** *
consensus_2928#0 TCCTATCTATGTCGCTGTATCATAG-AGATCATTTTAAGGATACAAT-TAAAGGATAAAT 117
consensus_2928#1 ACCGGAGAATCACACAGCATCCTGGGAGATCTTAATTGGAAAATGTTGTCCCAGATTGAG 115
** ** * * * *** * * ***** * * * * * * * *** *
consensus_2928#0 TCGTGGGTCTCCTTGATGGGATGGACTGCGTTTGGGCGGTAGAACAATCATCGGCACTTT 177
consensus_2928#1 TCATCATTATCTTCGACGTATGGAGGAACGTTTGACGAATAAAATCAAGATTCCCATTTT 175
** * * ** * ** * * ****** ** ** * ** ** ***
consensus_2928#0 CTGTGAATAATATCCTTATGATTTTAGAAAAAGATGCTCGTCACTCGAATATCAACTTCC 237
consensus_2928#1 ATTTCGCGTCCATCATT----CTTTAGGCGATGGTA-TGGCACTTCTAAAGTT--CTTTA 228
* * *** ** ***** * * * * * ** ** * ***
consensus_2928#0 TGGAGAGTTTTCGTGATTTGGTGAGGAATCGCATAGTATGCTCGTCTTTTGAAAAGCTGT 297
consensus_2928#1 GAGATGTTATTATTGACAAGGAACCAGTTCCGGAAACATTCTTA-CAGTTGGATAGCAGT 287
** * ** *** ** ** * ** ** * *** * *** **
consensus_2928#0 TGTACAAGAGAAAGAGAAAATTTGGTTATTATTTCTGGGAGAGAAGTGAAGAGATCGATC 357
consensus_2928#1 TTGAAAATGAAGAACGAGA----------------------------------------- 306
* * ** * * ** *
consensus_2928#0 TGAGAGAACGTATCAGATGGTTGGAATACGAGCGCACGAATTGCGACGGATCCTGTGATA 417
consensus_2928#1 ------------------------------------------------------------
consensus_2928#0 ATATTTACAATAGTCATCTGAAGAAAGTTC 447
consensus_2928#1 ------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |