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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_321#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 873 fasta sequence
[TCTCGATTCGTATTATTGAAAATCGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTATCCCCGCGACACTTCTTTGCGCCAAAAAAAAAAGGATGAAAATTCTTAGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGGAAGAAAGGAGGAGGGCGGAGGAAGAGGAACGGAGGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTCATGCGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAACCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGAACCAAGTATAGTCACGGATAGTCACGAGTGCTTCATGGATTTTTTTAATATAATTGACGGTCTCTCATCGATCTTTTCACTGATCATCGTATAGTATGCTCCTTCGAGTCTGTATTACGTCGACTTATACGATCACACACACACATACACACACAACTCTCCCCTTTTTGAAAACATGTTATCACGTGTCGAGTAACACGGAACGCGTACAGGCTATAGTTGGCTCGTTGGCCCGATATTTCGCGCGCGATCCAATATAATCTGTACATCTGTTCGCCGTGACGATTATAGTCCGGAACTAAAGTCNNNNCACCTAAGTTAACTCGTCGGCTGTAATCGGCGGCCTCCTCGATGGCTGGTCACGTAATTTTCGTAAGTCGATCGCAGTCGACCGTCATTATTACGCTTACTTAAGCTACAAGTCGAGTATAATCAGCGGTAAAGAAAAAAAAAAAAAAAGTGTAATATTTAGGAGTTTGTTGACTATAATCAATCTTTCGTGCTTTACTCGAAATACTATATATATAT]
[+] EMBL BI505851 [TCTCGATTCGTATTATTGAAAATCGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTATCCCCGCGACACTTCTTTGCGCCAAAAAAAAAAGGATGAAAATTCTTAGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGGAAGAAAGGAGGAGGGCGGAGGAAGAGGAACGGAGGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTCATGCGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAACCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGAACCAAGTATAGTCACGGATAGTCACGAGTGCTTCATGGATTTTTTTAATATAATTGACGGTCTCTCATCGATCTTTTCACTGATCATCGTATAGTATGCTCCTTCGAGTCTGTATTACGTCGACTTATACGATCACACACACACATACACACACAACTCTCCCCTTTTTGAAAACATGTTATCACGTGTCGAGTAACACGGAACGCGTACAGGCTATAGTTGGCTCGTTGGCCCGATATTTCGCGCGCGATCCAATATA ]
[+] EMBL BI505213 [ CGTGTCGAGTAACACGGAACGCGTACAGGCTATAGTTGGCTCGTTGGCCCGATATTTCGCGCGCGATCCAATATAATCTGTACATCTGTTCGCCGTGACGATTATAGTCCGGAACTAAAGTCNNNNCACCTAAGTTAACTCGTCGGCTGTAATCGGCGGCCTCCTCGATGGCTGGTCACGTAATTTTCGTAAGTCGATCGCAGTCGACCGTCATTATTACGCTTACTTAAGCTACAAGTCGAGTATAATCAGCGGTAAAGAAAAAAAAAAAAAAAGTGTAATATTTAGGAGTTTGTTGACTATAATCAATCTTTCGTGCTTTACTCGAAATACTATATATATAT]
consensusID : consensus_321#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 626 fasta sequence
[CCGACAGAATCGATCGTTAATTTGACTCGTTCCACGGAAAAAAAAAAAAAAAGAAAAAAGAAACGTTCCTTAACGTGGAACGCCGCGTTCTCAGCGTGAAATCGTCCGCGTTATCCTTTCTTTTCTTTTTTCACATCTCTGTCGAACGATTACTCGAGTCCCATAAATACTCGAGAATTGGGCCATTAATTCGCTTATTCCGAAATTCCCCATCATTTCTCGATTCGTATTATTGAAAATCGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTATCCCCGCGACACTTCTTTGCGCCAAAGTTGGGAAAAAAAAAAAAAAAGGATGAAAATTCTTAGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGGAAGAAAGGAGGAGGGCGGAGGAAGANNNNNCGGAGGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTCATGTGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAACCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGNNCCAAGTATAGTCACGGATAGTCACGAGTGCTTCATGGATTTTTTTAAT]
[+] EMBL BI505050 [CCGACAGAATCGATCGTTAATTTGACTCGTTCCACGGAAAAAAAAAAAAAAAGAAAAAAGAAACGTTCCTTAACGTGGAACGCCGCGTTCTCAGCGTGAAATCGTCCGCGTTATCCTTTCTTTTCTTTTTTCACATCTCTGTCGAACGATTACTCGAGTCCCATAAATACTCGAGAATTGGGCCATTAATTCGCTTATTCCGAAATTCCCCATCATTTCTCGATTCGTATTATTGAAAATCGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTATCCCCGCGACACTTCTTTGCGCCAAAGTTGGGAAAAAAAAAAAAAAAa ]
[+] EMBL BI505163 [ AACGCCGCGTTCTCAGCGTGAAATCGTCCGCGTTATCCTTTCTTTTCTTTTTTCACATCTCTGTCGAACGATTACTCGAGTCCCATAAATACTCGAGAATTGGGCCATTAATTCGCTTATTCCGAAATTCCCCATCATTTCTCGATTCGTATTATTGAAAATCGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTATCCCCGCGACACTTCTTTGCGCCAAAGTTGGGAAAAAAAAAAAAAAAGGATGAAAATTCTTAGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGAAAGAAAGGAGGAGGGCGGAGGAAGA GGAACGGAAGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTCATATGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAACCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGAACCAAGTATAGTCACGGATAGTCACGAGTGC ]
[+] EMBL BI503807 [ TATCCTTTCTTTTCTTTTTTCACATCTCTGTCGAACGATTACTCGAGTCCCATAAATACTCGAGAATTGGGCCATTAATTCGCTTATTCCGAAATTCCCCATCATTTCTCGATTCGTATTATTGAAAATCGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTATCCCCGCGACACTTCTTTGCGCCAAAGTTGGG AAAAAAAAAAAAAAGGATGAAAATTCTTAGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGGAAGAAAGGAGGAGGGCGGAGGAAGANNNNNCGGAGGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTCATGTGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAACCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGNNCCAAGTATAGTCACGGATAGTCACAAGTGCTTCATGGATTTTTTTAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_321#0 ------------------------------------------------------------
consensus_321#1 CCGACAGAATCGATCGTTAATTTGACTCGTTCCACGGAAAAAAAAAAAAAAAGAAAAAAG 60
consensus_321#0 ------------------------------------------------------------
consensus_321#1 AAACGTTCCTTAACGTGGAACGCCGCGTTCTCAGCGTGAAATCGTCCGCGTTATCCTTTC 120
consensus_321#0 ------------------------------------------------------------
consensus_321#1 TTTTCTTTTTTCACATCTCTGTCGAACGATTACTCGAGTCCCATAAATACTCGAGAATTG 180
consensus_321#0 -------------------------------------TCTCGATTCGTATTATTGAAAAT 23
consensus_321#1 GGCCATTAATTCGCTTATTCCGAAATTCCCCATCATTTCTCGATTCGTATTATTGAAAAT 240
***********************
consensus_321#0 CGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTAT 83
consensus_321#1 CGGAATCGAGTTCCGTTCGGATGATCCGTTTTTACACGATCCTCTTCCTCGTATTATTAT 300
************************************************************
consensus_321#0 CCCCGCGACACTTCTTTGCGCCAAA--------------AAAAAAAGGATGAAAATTCTT 129
consensus_321#1 CCCCGCGACACTTCTTTGCGCCAAAGTTGGGAAAAAAAAAAAAAAAGGATGAAAATTCTT 360
************************* *********************
consensus_321#0 AGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGGAAGAAAGGAGGAGGGCG 189
consensus_321#1 AGAGGACTTTGCGCGAGAAAAGGAGGGATGGAGAAAAGGGGGGAAGAAAGGAGGAGGGCG 420
************************************************************
consensus_321#0 GAGGAAGAGGAAC-GGAGGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTC 248
consensus_321#1 GAGGAAGANNNNNCGGAGGTGACTATACACGGTCGTTCGCAGCCCGGAGAGATTATAGTC 480
******** **********************************************
consensus_321#0 ATGCGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAA 308
consensus_321#1 ATGTGTAACGGCGTCCACGTTAGAGATACACGTTCTCGCCTATGGAATGAGAGTGTTTAA 540
*** ********************************************************
consensus_321#0 CCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGAACCAAGTATAGTCACGGATAGTC 368
consensus_321#1 CCCCTTCCGGTATGGCCACGTATAACAGTATCTGCGNNCCAAGTATAGTCACGGATAGTC 600
************************************ **********************
consensus_321#0 ACGAGTGCTTCATGGATTTTTTTAATATAATTGACGGTCTCTCATCGATCTTTTCACTGA 428
consensus_321#1 ACGAGTGCTTCATGGATTTTTTTAAT---------------------------------- 626
**************************
consensus_321#0 TCATCGTATAGTATGCTCCTTCGAGTCTGTATTACGTCGACTTATACGATCACACACACA 488
consensus_321#1 ------------------------------------------------------------
consensus_321#0 CATACACACACAACTCTCCCCTTTTTGAAAACATGTTATCACGTGTCGAGTAACACGGAA 548
consensus_321#1 ------------------------------------------------------------
consensus_321#0 CGCGTACAGGCTATAGTTGGCTCGTTGGCCCGATATTTCGCGCGCGATCCAATATAATCT 608
consensus_321#1 ------------------------------------------------------------
consensus_321#0 GTACATCTGTTCGCCGTGACGATTATAGTCCGGAACTAAAGTCNNNNCACCTAAGTTAAC 668
consensus_321#1 ------------------------------------------------------------
consensus_321#0 TCGTCGGCTGTAATCGGCGGCCTCCTCGATGGCTGGTCACGTAATTTTCGTAAGTCGATC 728
consensus_321#1 ------------------------------------------------------------
consensus_321#0 GCAGTCGACCGTCATTATTACGCTTACTTAAGCTACAAGTCGAGTATAATCAGCGGTAAA 788
consensus_321#1 ------------------------------------------------------------
consensus_321#0 GAAAAAAAAAAAAAAAGTGTAATATTTAGGAGTTTGTTGACTATAATCAATCTTTCGTGC 848
consensus_321#1 ------------------------------------------------------------
consensus_321#0 TTTACTCGAAATACTATATATATAT 873
consensus_321#1 -------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |