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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 674 fasta sequence
[TGTACGCGATGCCTGATCCCGTAACGCTGAGCAACAATGGTGACGTAGAGCTGTTCATCCTGGCGGTCGTATGATCCTCGGCGGTCTTGTTCGGCAAATTGCCCTTGCTGGCGTTCAGCGCACTGTTTGTCGGGTCTTCGTCAATGTATGTGAAGTCAGAAAGTGGTCGGGGCCCAGTGTGGCTGCGTGAACTGCGCATACTGTGTAAGCTGTGTAAACTATGGACAGAGCGACGCTCCTCCAAATCTTCTAGAGTCGACTTGAACGCTCTGATTACTCGAAGCTGTGTCTGTAGTCGTGTTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTTTTTATCCGAGTCAGGGTCGAATTTCTCATCTCCTAGATTGATCGCACTGATATCATCCGGCTGGCCGCGGCCCCATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAATAGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTGCTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTTACGATCCAGATAGTGTAAAAGATGGGATTGGTGAATATTCCTTGGAAGNCATTACGCTGACCATGGATTTTTCTAGCGTTAAATTCGTTG]
[+] EMBL BI505303 [TGTACGCGATGCCTGATCCCGTAACGCTGAGCAACAATGGTGACGTAGAGCTGTTCATCCTGGCGGTCGTATGATCCTCGGCGGTCTTGTTCGGCAAATTGCCCTTGCTGGCGTTCAGCGCACTGTTTGTCGGGTCTTCGTCAATGTATGTGAAGTCAGAAAGTGGTCGGGGCCCAGTGTGGCTGCGTGAACTGCGCATACTGTGTAAGCTGTGTAAACTATGGACAGAGCGACGCTCCTCCAAATCTTCTAGAGTCGACTTGAACGCTCTGATTACTCGAAGCTGTGTCTGTAGTCGTGTTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTTTTTATCCGAGTCAGGGTCGAATTTCTCATCTCCTAGATTGATCGCACTGATATCATCCGGCTGGCCGCGGCCCCATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAATAGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTGCTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTTACGATCCAGATAGTGTAAAAGATGGGATTGGTGAATATTCCTTGGAAGNCATTACGCTGACCATGGATTTTTCTAGCGTTAAATTCGTTG]
[+] EMBL BI505444 [TGTACGCGATGCCTGATCCCGTAACGCTGAGCAACAATGGTGACGTAGAGCTGTTCATCCTGGCGGTCGTATGATCCTCGGCGGTCTTGTTCGGCAAATTGCCCTTGCTGGCGTTCAGCGCACTGTTTGTCGGGTCTTCGTCAATGTATGTGAAGTCAGAAAGTGGTCGGGGCCCAGTGTGGCTGCGTGAACTGCGCATACTGTGTAAGCTGTGTAAACTATGGACAGAGCGACGCTCCTCCAAATCTTCTAGAGTCGACTTGAACGCTCTGATTACTCGAAGCTGTGTCTGTAGTCGTGTTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTTTTTATCCGAGTCAGGGTCGAATTTCTCATCTCCTAGATTGATCGCACTGATATCATCCGGCTGGCCGCGGCCCCATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAATAGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTGCTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTTACGATCCAGATAGTG ]
consensusID : consensus_347#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 580 fasta sequence
[TTTTTGTCCTTTCCTCCGAACGCGCTGGCCACGAGATAAACAAGGATGAAGATGACTTCTTTTTCGTGTTTACATATCGTCAGAGAGGATCGAACGTAACACAGCTTGATAAACATATCGCTGCTGACCCCGCCATTCTTCTCCCATNCTAAACAGCGGTCTCTGTATGACTGTGACTTGACAATCTTTCCACATCTATCTCGGGTATGGTCAGTTCGTCTGGGTTGTTATCGGCGTATTCAATGCTGCTCGTTTGCGAGAGCCGCTTGCTTAAGGACGACTGTTTTCTCAGTACCTCCGCCAATGTAGTGCTGCTGTGCTCGCTCGTGTAGCGTGCGTCTAGGCCCTGCCGAAATGCGTTCACTACGCGGATAGCTTGGTCTGTCGAACTCTTGCTGTAGGGTACTGGTATCAAACGTTCCTGCAACTCGCCACCTATTACCTGTGTCTGTAGTCGTGTTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTTTTTATCCGAGTCAGGGTCGAATTTCTCATCTCCTAGATTGATCGCACTGATATCATCCGGCTGGCCGCGGCCCCATGAAAG]
[-] EMBL BI503233 [TTTTTGTCCTTTCCTCCGAACGCGCTGGCCACGAGATAAACAAGGATGAAGATGACTTCTTTTTCGTGTTTACATATCGTCAGAGAGGATCGAACGTAACACAGCTTGATAAACATATCGCTGCTGACCCCGCCATTCTTCTCCCATNCTAAACAGCGGTCTCTGTATGACTGTGACTTGACAATCTTTCCACATCTATCTCGGGTATGGTCAGTTCGTCTGGGTTGTTATCGGCGTATTCAATGCTGCTCGTTTGCGAGAGCCGCTTGCTTAAGGACGACTGTTTTCTCAGTACCTCCGCCAATGTAGTGCTGCTGTGCTCGCTCGTGTAGCGTGCGTCTAGGCCCTGCCGAAATGCGTTCACTACGCGGATAGCTTGGTCTGTCGAACTCTTGCTGTAGGGTACTGGTATCAAACGTTCCTGCAACTCGCCACCTATTACCTGTGTCTGTAGTCGTGTTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTTTTTATCCGAGTCAGGGTCGAATTTCTCATCTCCTAGATTGATCGCACTGATATCATCCGG ]
[-] EMBL BI508091 [ TTTGTCCTTTCCTCCGAACGCGCTGGCCACGAGATAAACAAGGATGAAGATGACTTCTTTTTCGTGTTTACATATCGTCAGAGAGGATCGAACGTAACACAGCTTGATAAACATATCGCTGCTGACCCCGCCATTCTTCTCCCATTCTAAACAGCGGTCTCTGTATGACTGTGACTTGACAATCTTTCCACATCTATCTCGGGTATGGTCAGTTCGTCTGGGTTGTTATCGGCGTATTCAATGCTGCTCGTTTGCGAGAGCCGCTTGCTTAAGGACGACTGTTTTCTCAGTACCTCCGCCAATGTAGTGCTGCTGTGCTCGCTCGTGTAGCGTGCGTCTAGGCCCTGCCGAAATGCGTTCACTACGCGGATAGCTTGGTCTGTCGAACTCTTGCTGTAGGGTACTGGTATCAAACGTTCCTGCAACTCGCCACCTATTACCTGTGTCTGTAGTCGTGTTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTTTTTATCCGAGTCAGGGTCGAATTTCTCATCTCCTAGATTGATCGCACTGATATCATCCGGCTGGCCGCGGCCCCATGAAAG]
consensusID : consensus_347#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[TGTAGTGCTGCTGTGCTCGCTCGTGTAGCGTGCGTCTAGGCCCTGCCGAAATGCGTTCACTACGCGGATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAATAGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTGCTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTCACGATCCAGATAGTGTAAAAGATGGGATTGGTGAATATTCCTTGGAAGACATTACGCTGACCATGGATTTTTCTAGCGTTAAATTCGTTGAAAAGTGTCATCATGACGAATGTATTAAAGATAATAGTAAAGTGTTGCGTTGGACCGCCACCAGCCTGCGCAACTCCTCGGCCTGTTTCGATGTCGAGCATCTTATCACCAACGAAAAGAAGCATAAAAATTACAGTCAACTGATAGATAGCTTGGCCAAGAATGTTCTTCATCATTGTCCTGGAAATGAGCGGT]
[-] EMBL BI506905 [TGTAGTGCTGCTGTGCTCGCTCGTGTAGCGTGCGTCTAGGCCCTGCCGAAATGCGTTCACTACGCGGATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAATAGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTGCTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTCACGATCCAGATAGTGTAAAAGATGGGATTGGTGAATATTCCTTGGAAGACATTACGCTGACCATGGATTTTTCTAGCGTTAAATTCGTTGAAAAGTGTCATCATGACGAATGTATTAAAGATAATAGTAAAGTGTTGCGTTGGACCGCCACCAGCCTGCGCAACTCCTCGGCCTGTTTCGATGTCGAGCATCTTATCACCAACGAAAAGAAGCATAAAAATTACAGTCAACTGATAGATAGCTTGGCCAAGAATGTTCTTCATCATTGTCCTGGAAATGAGCGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_347#0 TGTACGCGATGCCTGATCCCGTAACGCTGAGCAACAATGGTGACGTAGAGCTGTTCATCC 60
consensus_347#2 ------------------------------------------------------------
consensus_347#1 ------------------------------------------------------------
consensus_347#0 TGGCGGTCGTATGATCCTCGGCGGTCTTGTTCGGCAAATTGCCCTTGCTGGCGTTCAGCG 120
consensus_347#2 ------------------------------------------------------------
consensus_347#1 ------------------------------------------------------------
consensus_347#0 CACTGTTTGTCGGGTCTTCGTCAATGTATGTGAAGTCAGAAAGTGGTCGGGGCCCAGTGT 180
consensus_347#2 ------------------------------------------------------------
consensus_347#1 ---TTTTTGTCCTTTCCTC-CGAACGCGCTGGCCACGAGATAAACAAGGATGAAGATGAC 56
consensus_347#0 GGCTGCGTGAACTGCGCATACTGTGTAAGCTGTGTAAACTATGGACAGAGCGACGCTCCT 240
consensus_347#2 ------------------------------------------------------------
consensus_347#1 TTCTTTTTCGTGTTTACATATCGTCAGAGAGGATCGAACGTAACACAGCTTGATAAACAT 116
consensus_347#0 CCAAATCTTCTAGAGTCGACTTGAACGCTCTGATTACTCGAAGCTGTGTCTGTAGTCGTG 300
consensus_347#2 ------------------------------------------------------------
consensus_347#1 ---ATCGCTGCTGACCCCGCCATTCTTCTCCCATNCTAAACAGCGGTCTCTGTATGACTG 173
consensus_347#0 TTAGACCACGGATCCATAGAATTTGTCCTGCGCGCGGCTT-TTTATCCGAGTCAGGGTCG 359
consensus_347#2 -----------------------------------------TGTAGTGCTGCTGTGCTCG 19
consensus_347#1 TGACTTGACAATCTTTCCACATCTATCTCGGGTATGGTCAGTTCGTCTGGGTTGTTATCG 233
* * ***
consensus_347#0 AATTTCTCA-----TCTCCTAGATTGATCGCACTGATATCATC-CGGCTGGCCGCGGCCC 413
consensus_347#2 C-TCGTGTA-----GCGTGCGTCTAGGCCCTGCCGAAATGCGT-TCACTA--CGCGG--- 67
consensus_347#1 GCGTATTCAATGCTGCTCGTTTGCGAGAGCCGCTTGCTTAAGGACGACTGTTTTCTCAGT 293
* * * * ** *
consensus_347#0 CATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAAT 473
consensus_347#2 -ATGAAAGGATTTTAGGAATCTTGCGCGTAGGAATAGTTGTAATTACTTGGCCCCACAAT 126
consensus_347#1 ACCTCCGCCAATGTAGTGCTGCTGTGCTCGCTCGTGTAGCGTGCGTCTAGGCCCTGCCGA 353
* * *** * ** ** * ** ***** *
consensus_347#0 AGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTG 533
consensus_347#2 AGAGTACCGACTCCGAAGAATAGGCACCACATCCATTGTTCTAATGTGAGAGCTTTCGTG 186
consensus_347#1 AATGCGTTCACTACGCGGA-TAGCTTGGTCTGTCGAACTCTTGCTGT-AGGGTACTGGTA 411
* * *** ** ** *** * * * * *** ** * * **
consensus_347#0 CTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTTACGATCCAG 593
consensus_347#2 CTGAACGCCATTTTACCATATTGTATGATAACTACCTGCGATAGACATGTCACGATCCAG 246
consensus_347#1 TCAAACGTTCCTGCAACTCGCCACCTATTACCTGTGT-CTGTAGTCGTGTTAGACCACGG 470
**** * * * * ** ** * * *** * *** * * *
consensus_347#0 ATAGTGTAAAAGATGGGATTGGTGAATATTCCTTGGAAGNCATTACGCTGACCATGGATT 653
consensus_347#2 ATAGTGTAAAAGATGGGATTGGTGAATATTCCTTGGAAGACATTACGCTGACCATGGATT 306
consensus_347#1 ATC-CATAGAATTTGTCCTGCGCGCG-GCTTTTTATCCGAGTCAGGGTCGAATTTCTCAT 528
** ** ** ** * * * * ** * * ** * *
consensus_347#0 TTTCTAGCGTTAAATTCGTTG--------------------------------------- 674
consensus_347#2 TTTCTAGCGTTAAATTCGTTGAAAAGTGTCATCATGACGAATGTATTAAAGATAATAGTA 366
consensus_347#1 CTCCTAG-ATTGATCGCACTGATATCATCCGGCTGGCCGCGGCCCCATGAAAG------- 580
* **** ** * * **
consensus_347#0 ------------------------------------------------------------
consensus_347#2 AAGTGTTGCGTTGGACCGCCACCAGCCTGCGCAACTCCTCGGCCTGTTTCGATGTCGAGC 426
consensus_347#1 ------------------------------------------------------------
consensus_347#0 ------------------------------------------------------------
consensus_347#2 ATCTTATCACCAACGAAAAGAAGCATAAAAATTACAGTCAACTGATAGATAGCTTGGCCA 486
consensus_347#1 ------------------------------------------------------------
consensus_347#0 ------------------------------------
consensus_347#2 AGAATGTTCTTCATCATTGTCCTGGAAATGAGCGGT 522
consensus_347#1 ------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |