Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 393 cluster # 393       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_393#0 length = 604 sequences # 4  
consensusID : consensus_393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 604
fasta sequence 
                              [TGCCTCCTCTAAAGTGCGACTGATATTTACAGGATATTGTTCCAATTGGATGCTCCCAAGGAAGCCGGGGTATTCAAAAGCAATAACTTCGTAGGCGGTCGCGGATCCTCGATGAGGTACCTTTGCGACCGATTAATATAAATAATAATAACGGCGCAGAAAAAAAAAATAATAATAAATAAATAGGCCGAGTGAATTTTTAACCTTAATAATTTTAATTGTAACGATGACTTAGTGGCGCAGGATCACACACATAAACACACACAAGGACGTACGAAGTCTGGAACACACTCGG-GACACGTGTACACACATACATATACACACACACATATTTACACAAACGTAGTGAATAATTATTTGCTACTCGTTACGATAATAAGCTAATCGAGAAAATAAGAGAGAATAATTTAGCGAGGATGAAAATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAG-GAAAGAGGACGCGTGAAAGNNNGGAGTACGAGCAGTAAGAAATGGTAGAAATAGTGTAGTGGAACATTTATACACGAGCGCCTAGCACGCGCACACCCATCCACATAGCCACGTACATACAGTGACACACTATACAGTGAGCCT]

[+] EMBL BI513600             [TGCCTCCTCTAAAGTGCGACTGATATTTACAGGATATTGTTCCAATTGGATGCTCCCAAGGAAGCCGGGGTATTCAAAAGCAATAACTTCGTAGGCGGTCGCGGATCCTCGATGAGGTACCTTTGCGACCGATTAATATAAATAATAATAACGGCGCAGAAAAAAAAAATAATAATAAATAAATAGGCCGAGTGAATTTTTAACCTTAATAATTTTAATTGTAACGATGACTTAGTGGCGCAGGATCACACACATACACACACACAAGGACGTACGAAGTCTGGAACACACTCGG GACACGTGTTCACACATACATATACACACACACATATTTACACAAACGTAGTGAATAATTATTTGCTACTCGTTACGATAATAAGCTAATCGAGAAAATAAGAGAGAATAATTTAGCGAGGATGAAAATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGA                                                                                                                                       ]
[+] EMBL BI513999             [                                   ATTGTTCCAATTGGATGCTCCCAAGGAAGCCGGGGTATTCAAAAGCAATAACTTCGTAGGCGGTCGCGGATCCTCGATGAGGTACCTTTGCGACCGATTAATATAAATAATAATAACGGCGCAGAAAAAAAAAATAATAATAAATAAATAGGCCGAGTGAATTTTTAACCTTAATAATTTTAATTGTAACGATGACTTAGTGGCGCAGGATCACACACATAAACACACACAAGGACGTACGAAGTCTGGAACACACTCGG GACACGTGTACACACATACATATACACACACACATATTTACACAAACGTAGTGAATAATTATTTGCTACTCGTTACGATAATAAGCTAATCGAGAAAATAAGAGAGAATAATTTAGCGAGGATGAAAATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAG GAAAACGGACGCGTGAAAGNNNGGAGTACGAGCAGTAAGAAATGGTAGAAATAGTGTAGTGGAACATTTATACACGAGCGCCTAGCACGCGCACACCCATCCACATAGCCACGTACATACAGTGACACACTATACAGTGAGCCT]
[+] EMBL BI514086             [                                   ATTGTTCCAATTGGATGCTCCCAAGGAAGCCGGGGTATTCAAAAGCAATAACTTCGTAGGCGGTCGCGGATCCTCGATGAGGTACCTTTGCGACCGATTAATATAAATAATAATAACGGCGCAGAAAAAAAAAATAATAATAAATAAATAGGCCGAGTGAATTTTTAACCTTAATAATTTTAATTGTAACGATGACTTAGTGGCGCAGGATCACACACATAAACACACACAAGGACGTACGAAGTCTGGAACACACTCGG GACACGTGTACACACATACATATACACACACACATATTTACACAAACGTAGTGAATAATTATTTGCTACTCGTTACGATAATAAGCTAATCGAGAAAATAAGAGAGAATAATTTAGCGAGGATGAAAATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAG GA                                                                                                                                              ]
[+] EMBL BI507791             [                                                                                                                                                            CAGAAAAAAAAAATAATAATAAATAAATAGGCCGAGTGAATTTTTAACCTTAATAATTTTAATTGTAACGATGACTTAGNGGCGCAGGATCACACACATACACACACACAAGGACGTACGAAGTCTGGAACACACTCGGNNNNACGTGTACACACATACATATACACACACACATATTTACACAAACGTAGTGAATAATTATTTGCTACTCGTTACGATAATAAGCTAATCGAGAAAATAAGAGAGAATAATTTAGCGAGGATGAAAATAGCGAGAGAGAGA                                                                                                                                                                        ]




>consensus_393#0
TGCCTCCTCTAAAGTGCGACTGATATTTACAGGATATTGTTCCAATTGGATGCTCCCAAG
GAAGCCGGGGTATTCAAAAGCAATAACTTCGTAGGCGGTCGCGGATCCTCGATGAGGTAC
CTTTGCGACCGATTAATATAAATAATAATAACGGCGCAGAAAAAAAAAATAATAATAAAT
AAATAGGCCGAGTGAATTTTTAACCTTAATAATTTTAATTGTAACGATGACTTAGTGGCG
CAGGATCACACACATAAACACACACAAGGACGTACGAAGTCTGGAACACACTCGGGACAC
GTGTACACACATACATATACACACACACATATTTACACAAACGTAGTGAATAATTATTTG
CTACTCGTTACGATAATAAGCTAATCGAGAAAATAAGAGAGAATAATTTAGCGAGGATGA
AAATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGAAAGAGGACGCGTGAAAGN
NNGGAGTACGAGCAGTAAGAAATGGTAGAAATAGTGTAGTGGAACATTTATACACGAGCG
CCTAGCACGCGCACACCCATCCACATAGCCACGTACATACAGTGACACACTATACAGTGA
GCCT

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)